RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 BCANQ96GW7 911 aa26.11■■□□□ 1.77
CCDC50-202ENST00000392456 ARID4BQ4LE39 1312 aaPredicted RBP26.1■■□□□ 1.77
CCDC50-202ENST00000392456 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
CCDC50-202ENST00000392456 ZC3H13Q5T200 1668 aaKnown RBP26.1■■□□□ 1.77
CCDC50-202ENST00000392456 SYNMO15061 1565 aa26.09■■□□□ 1.77
CCDC50-202ENST00000392456 IDI1Q13907 227 aa26.08■■□□□ 1.77
CCDC50-202ENST00000392456 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.07■■□□□ 1.76
CCDC50-202ENST00000392456 TRPM1Q7Z4N2 1603 aa26.07■■□□□ 1.76
CCDC50-202ENST00000392456 MROH2AA6NES4 1674 aa26.07■■□□□ 1.76
CCDC50-202ENST00000392456 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
CCDC50-202ENST00000392456 KIF1BO60333 1816 aa26.05■■□□□ 1.76
CCDC50-202ENST00000392456 ADGRF5Q8IZF2 1346 aa26.04■■□□□ 1.76
CCDC50-202ENST00000392456 CLTCQ00610 1675 aaKnown RBP26.04■■□□□ 1.76
CCDC50-202ENST00000392456 ST20-MTHFSA0A0A6YYL1 179 aa26.03■■□□□ 1.76
CCDC50-202ENST00000392456 ADGRB3O60242 1522 aa26.02■■□□□ 1.76
CCDC50-202ENST00000392456 MADDQ8WXG6 1647 aa26.01■■□□□ 1.75
CCDC50-202ENST00000392456 NEURL4Q96JN8 1562 aa26.01■■□□□ 1.75
CCDC50-202ENST00000392456 PREX1Q8TCU6 1659 aa26■■□□□ 1.75
CCDC50-202ENST00000392456 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
CCDC50-202ENST00000392456 NUTM2DQ5VT03 806 aaPredicted RBP25.99■■□□□ 1.75
CCDC50-202ENST00000392456 PIK3C2BO00750 1634 aa25.99■■□□□ 1.75
CCDC50-202ENST00000392456 KIF7Q2M1P5 1343 aa25.98■■□□□ 1.75
CCDC50-202ENST00000392456 ERVK-7P63135 1459 aa25.97■■□□□ 1.75
CCDC50-202ENST00000392456 SLC52A1Q9NWF4 448 aa25.97■■□□□ 1.75
CCDC50-202ENST00000392456 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
CCDC50-202ENST00000392456 CFAP70Q5T0N1 1121 aa25.96■■□□□ 1.75
CCDC50-202ENST00000392456 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
CCDC50-202ENST00000392456 STAC3Q96MF2 364 aa25.96■■□□□ 1.75
CCDC50-202ENST00000392456 FKBP8Q14318 412 aa25.95■■□□□ 1.75
CCDC50-202ENST00000392456 ESF1Q9H501 851 aaKnown RBP25.95■■□□□ 1.75
CCDC50-202ENST00000392456 IFT172Q9UG01 1749 aa25.92■■□□□ 1.74
CCDC50-202ENST00000392456 MYOM2P54296 1465 aa25.92■■□□□ 1.74
CCDC50-202ENST00000392456 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
CCDC50-202ENST00000392456 PODXL2Q9NZ53 605 aa25.91■■□□□ 1.74
CCDC50-202ENST00000392456 POLR3GLQ9BT43 218 aa25.9■■□□□ 1.74
CCDC50-202ENST00000392456 IL27Q8NEV9 243 aa25.89■■□□□ 1.74
CCDC50-202ENST00000392456 NRXN1Q9ULB1 1477 aa25.88■■□□□ 1.73
CCDC50-202ENST00000392456 CEBPAP49715 358 aaPredicted RBP25.88■■□□□ 1.73
CCDC50-202ENST00000392456 RPGRIP1LQ68CZ1 1315 aa25.87■■□□□ 1.73
CCDC50-202ENST00000392456 PPLO60437 1756 aa25.87■■□□□ 1.73
CCDC50-202ENST00000392456 SPATA31D1Q6ZQQ2 1576 aa25.86■■□□□ 1.73
CCDC50-202ENST00000392456 MYO5BQ9ULV0 1848 aa25.86■■□□□ 1.73
CCDC50-202ENST00000392456 TMEM131LA2VDJ0 1609 aa25.85■■□□□ 1.73
CCDC50-202ENST00000392456 TESK2Q96S53 571 aa25.85■■□□□ 1.73
CCDC50-202ENST00000392456 NEXMIFQ5QGS0 1516 aa25.84■■□□□ 1.73
CCDC50-202ENST00000392456 LAMC1P11047 1609 aa25.84■■□□□ 1.73
CCDC50-202ENST00000392456 PIK3C2GO75747 1445 aa25.83■■□□□ 1.72
CCDC50-202ENST00000392456 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
CCDC50-202ENST00000392456 STAG3Q9UJ98 1225 aa25.82■■□□□ 1.72
CCDC50-202ENST00000392456 TMEM132EQ6IEE7 984 aa25.8■■□□□ 1.72
CCDC50-202ENST00000392456 VGFO15240 615 aaPredicted RBP25.8■■□□□ 1.72
CCDC50-202ENST00000392456 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
CCDC50-202ENST00000392456 POLR1AO95602 1720 aaPredicted RBP25.78■■□□□ 1.72
CCDC50-202ENST00000392456 SCAF11Q99590 1463 aaKnown RBP25.77■■□□□ 1.72
CCDC50-202ENST00000392456 DISP3Q9P2K9 1392 aa25.77■■□□□ 1.72
CCDC50-202ENST00000392456 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
CCDC50-202ENST00000392456 RTN4Q9NQC3 1192 aaKnown RBP25.76■■□□□ 1.71
CCDC50-202ENST00000392456 A2ML1A8K2U0 1454 aa25.76■■□□□ 1.71
CCDC50-202ENST00000392456 IQGAP1P46940 1657 aa25.76■■□□□ 1.71
CCDC50-202ENST00000392456 ANP32CO43423 234 aa25.75■■□□□ 1.71
CCDC50-202ENST00000392456 TNRQ92752 1358 aa25.75■■□□□ 1.71
CCDC50-202ENST00000392456 TRAK1Q9UPV9 953 aa25.71■■□□□ 1.71
CCDC50-202ENST00000392456 ZFYVE9O95405 1425 aa25.71■■□□□ 1.71
CCDC50-202ENST00000392456 ADGRB1O14514 1584 aa25.7■■□□□ 1.7
CCDC50-202ENST00000392456 FER1L4A9Z1Z3 1794 aa25.67■■□□□ 1.7
CCDC50-202ENST00000392456 TMF1P82094 1093 aa25.66■■□□□ 1.7
CCDC50-202ENST00000392456 RIMS2Q9UQ26 1411 aa25.66■■□□□ 1.7
CCDC50-202ENST00000392456 C3P01024 1663 aa25.66■■□□□ 1.7
CCDC50-202ENST00000392456 CNGB1Q14028 1251 aaPredicted RBP25.65■■□□□ 1.7
CCDC50-202ENST00000392456 SETBP1Q9Y6X0 1596 aa25.65■■□□□ 1.7
CCDC50-202ENST00000392456 NEFLP07196 543 aa25.64■■□□□ 1.7
CCDC50-202ENST00000392456 EIF3AQ14152 1382 aaKnown RBP25.62■■□□□ 1.69
CCDC50-202ENST00000392456 STK26Q9P289 416 aa25.61■■□□□ 1.69
CCDC50-202ENST00000392456 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
CCDC50-202ENST00000392456 NBR1Q14596 966 aa25.6■■□□□ 1.69
CCDC50-202ENST00000392456 PRKRIP1Q9H875 184 aaPredicted RBP25.59■■□□□ 1.69
CCDC50-202ENST00000392456 CENPJQ9HC77 1338 aaPredicted RBP25.58■■□□□ 1.69
CCDC50-202ENST00000392456 UBR1Q8IWV7 1749 aa25.56■■□□□ 1.68
CCDC50-202ENST00000392456 ALKQ9UM73 1620 aa25.56■■□□□ 1.68
CCDC50-202ENST00000392456 TMEM2Q9UHN6 1383 aa25.56■■□□□ 1.68
CCDC50-202ENST00000392456 CCER2I3L3R5 266 aa25.55■■□□□ 1.68
CCDC50-202ENST00000392456 LTKP29376 864 aa25.55■■□□□ 1.68
CCDC50-202ENST00000392456 CCDC184Q52MB2 194 aa25.55■■□□□ 1.68
CCDC50-202ENST00000392456 SAFB2Q14151 953 aaKnown RBP eCLIP25.54■■□□□ 1.68
CCDC50-202ENST00000392456 PTPRMP28827 1452 aa25.54■■□□□ 1.68
CCDC50-202ENST00000392456 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
CCDC50-202ENST00000392456 RIMS1Q86UR5 1692 aaKnown RBP25.53■■□□□ 1.68
CCDC50-202ENST00000392456 PANK3Q9H999 370 aa25.53■■□□□ 1.68
CCDC50-202ENST00000392456 PER1O15534 1290 aaPredicted RBP25.52■■□□□ 1.68
CCDC50-202ENST00000392456 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.52■■□□□ 1.68
CCDC50-202ENST00000392456 NOP58Q9Y2X3 529 aaKnown RBP25.51■■□□□ 1.67
CCDC50-202ENST00000392456 MYO3AQ8NEV4 1616 aa25.5■■□□□ 1.67
CCDC50-202ENST00000392456 YTHDC2Q9H6S0 1430 aaKnown RBP25.49■■□□□ 1.67
CCDC50-202ENST00000392456 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
CCDC50-202ENST00000392456 NRXN3Q9Y4C0 1643 aa25.48■■□□□ 1.67
CCDC50-202ENST00000392456 METP08581 1390 aa25.47■■□□□ 1.67
CCDC50-202ENST00000392456 SBNO2Q9Y2G9 1366 aa25.47■■□□□ 1.67
CCDC50-202ENST00000392456 ARHGEF28Q8N1W1 1705 aaKnown RBP25.47■■□□□ 1.67
CCDC50-202ENST00000392456 TXNDC2Q86VQ3 553 aa25.46■■□□□ 1.67
CCDC50-202ENST00000392456 KDM5AP29375 1690 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms