RNA–Protein interactions for RNA: ENST00000392306.2

SH2D2A-203, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,673 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-203ENST00000392306 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
SH2D2A-203ENST00000392306 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
SH2D2A-203ENST00000392306 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
SH2D2A-203ENST00000392306 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
SH2D2A-203ENST00000392306 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
SH2D2A-203ENST00000392306 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
SH2D2A-203ENST00000392306 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
SH2D2A-203ENST00000392306 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
SH2D2A-203ENST00000392306 SLC52A1Q9NWF4 448 aa18.3■□□□□ 0.52
SH2D2A-203ENST00000392306 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
SH2D2A-203ENST00000392306 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
SH2D2A-203ENST00000392306 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
SH2D2A-203ENST00000392306 ZFYVE9O95405 1425 aa18.28■□□□□ 0.52
SH2D2A-203ENST00000392306 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
SH2D2A-203ENST00000392306 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.51
SH2D2A-203ENST00000392306 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.51
SH2D2A-203ENST00000392306 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.51
SH2D2A-203ENST00000392306 ERVK-7P63135 1459 aa18.27■□□□□ 0.51
SH2D2A-203ENST00000392306 TMF1P82094 1093 aa18.25■□□□□ 0.51
SH2D2A-203ENST00000392306 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
SH2D2A-203ENST00000392306 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
SH2D2A-203ENST00000392306 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
SH2D2A-203ENST00000392306 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
SH2D2A-203ENST00000392306 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
SH2D2A-203ENST00000392306 IDI1Q13907 227 aa18.23■□□□□ 0.51
SH2D2A-203ENST00000392306 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
SH2D2A-203ENST00000392306 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
SH2D2A-203ENST00000392306 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
SH2D2A-203ENST00000392306 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
SH2D2A-203ENST00000392306 MYO5BQ9ULV0 1848 aa18.2■□□□□ 0.5
SH2D2A-203ENST00000392306 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
SH2D2A-203ENST00000392306 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
SH2D2A-203ENST00000392306 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
SH2D2A-203ENST00000392306 CDCA8Q53HL2 280 aa18.18■□□□□ 0.5
SH2D2A-203ENST00000392306 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
SH2D2A-203ENST00000392306 RALBP1Q15311 655 aa18.16■□□□□ 0.5
SH2D2A-203ENST00000392306 KDM5AP29375 1690 aaKnown RBP18.16■□□□□ 0.5
SH2D2A-203ENST00000392306 MYOM1P52179 1685 aa18.16■□□□□ 0.5
SH2D2A-203ENST00000392306 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
SH2D2A-203ENST00000392306 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
SH2D2A-203ENST00000392306 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
SH2D2A-203ENST00000392306 MLECQ14165 292 aa18.12■□□□□ 0.49
SH2D2A-203ENST00000392306 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
SH2D2A-203ENST00000392306 ARHGEF28Q8N1W1 1705 aaKnown RBP18.11■□□□□ 0.49
SH2D2A-203ENST00000392306 A2ML1A8K2U0 1454 aa18.11■□□□□ 0.49
SH2D2A-203ENST00000392306 MYBBP1AQ9BQG0 1328 aaKnown RBP18.11■□□□□ 0.49
SH2D2A-203ENST00000392306 QRICH2Q9H0J4 1663 aa18.1■□□□□ 0.49
SH2D2A-203ENST00000392306 ASXL1Q8IXJ9 1541 aa18.1■□□□□ 0.49
SH2D2A-203ENST00000392306 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
SH2D2A-203ENST00000392306 PANK3Q9H999 370 aa18.09■□□□□ 0.49
SH2D2A-203ENST00000392306 CENPJQ9HC77 1338 aaPredicted RBP18.09■□□□□ 0.49
SH2D2A-203ENST00000392306 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.48
SH2D2A-203ENST00000392306 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
SH2D2A-203ENST00000392306 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
SH2D2A-203ENST00000392306 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
SH2D2A-203ENST00000392306 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
SH2D2A-203ENST00000392306 SETD1AO15047 1707 aaKnown RBP18.04■□□□□ 0.48
SH2D2A-203ENST00000392306 HNRNPUQ00839 825 aaKnown RBP eCLIP18.03■□□□□ 0.48
SH2D2A-203ENST00000392306 TMEM132EQ6IEE7 984 aa18.03■□□□□ 0.48
SH2D2A-203ENST00000392306 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
SH2D2A-203ENST00000392306 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.47
SH2D2A-203ENST00000392306 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.47
SH2D2A-203ENST00000392306 INSRP06213 1382 aa18.01■□□□□ 0.47
SH2D2A-203ENST00000392306 ZBED9Q6R2W3 1325 aa18.01■□□□□ 0.47
SH2D2A-203ENST00000392306 FER1L4A9Z1Z3 1794 aa18.01■□□□□ 0.47
SH2D2A-203ENST00000392306 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
SH2D2A-203ENST00000392306 RIMS2Q9UQ26 1411 aa18.01■□□□□ 0.47
SH2D2A-203ENST00000392306 PTPRMP28827 1452 aa18■□□□□ 0.47
SH2D2A-203ENST00000392306 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
SH2D2A-203ENST00000392306 TNRQ92752 1358 aa18■□□□□ 0.47
SH2D2A-203ENST00000392306 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
SH2D2A-203ENST00000392306 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
SH2D2A-203ENST00000392306 NUTM2DQ5VT03 806 aaPredicted RBP17.99■□□□□ 0.47
SH2D2A-203ENST00000392306 UBR1Q8IWV7 1749 aa17.99■□□□□ 0.47
SH2D2A-203ENST00000392306 YTHDC2Q9H6S0 1430 aaKnown RBP17.99■□□□□ 0.47
SH2D2A-203ENST00000392306 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
SH2D2A-203ENST00000392306 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
SH2D2A-203ENST00000392306 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
SH2D2A-203ENST00000392306 KNSTRNQ9Y448 316 aa17.97■□□□□ 0.47
SH2D2A-203ENST00000392306 NLRP1Q9C000 1473 aa17.97■□□□□ 0.47
SH2D2A-203ENST00000392306 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
SH2D2A-203ENST00000392306 USP32Q8NFA0 1604 aa17.96■□□□□ 0.47
SH2D2A-203ENST00000392306 C3P01024 1663 aa17.95■□□□□ 0.46
SH2D2A-203ENST00000392306 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
SH2D2A-203ENST00000392306 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
SH2D2A-203ENST00000392306 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
SH2D2A-203ENST00000392306 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
SH2D2A-203ENST00000392306 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 KNDC1Q76NI1 1749 aa17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
SH2D2A-203ENST00000392306 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
SH2D2A-203ENST00000392306 TECPR2O15040 1411 aa17.88■□□□□ 0.45
SH2D2A-203ENST00000392306 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
SH2D2A-203ENST00000392306 SIRT1Q96EB6 747 aa17.87■□□□□ 0.45
SH2D2A-203ENST00000392306 BLMP54132 1417 aaPredicted RBP17.87■□□□□ 0.45
SH2D2A-203ENST00000392306 SLIT1O75093 1534 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms