RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 RIMBP3BA6NNM3 1639 aa28.79■■■□□ 2.2
SPTBN4-203ENST00000392023 RIMBP3Q9UFD9 1639 aa28.79■■■□□ 2.2
SPTBN4-203ENST00000392023 YEATS2Q9ULM3 1422 aa28.79■■■□□ 2.2
SPTBN4-203ENST00000392023 KIF1BO60333 1816 aa28.78■■■□□ 2.2
SPTBN4-203ENST00000392023 STAC3Q96MF2 364 aa28.78■■■□□ 2.2
SPTBN4-203ENST00000392023 KTN1Q86UP2 1357 aaKnown RBP28.77■■■□□ 2.2
SPTBN4-203ENST00000392023 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
SPTBN4-203ENST00000392023 SCAF11Q99590 1463 aaKnown RBP28.76■■■□□ 2.19
SPTBN4-203ENST00000392023 LMTK2Q8IWU2 1503 aa28.76■■■□□ 2.19
SPTBN4-203ENST00000392023 IQGAP1P46940 1657 aa28.74■■■□□ 2.19
SPTBN4-203ENST00000392023 NOS1P29475 1434 aa28.73■■■□□ 2.19
SPTBN4-203ENST00000392023 MAP3K4Q9Y6R4 1608 aa28.73■■■□□ 2.19
SPTBN4-203ENST00000392023 DIP2CQ9Y2E4 1556 aa28.71■■■□□ 2.19
SPTBN4-203ENST00000392023 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
SPTBN4-203ENST00000392023 PARD3Q8TEW0 1356 aa28.71■■■□□ 2.19
SPTBN4-203ENST00000392023 ABCC3O15438 1527 aa28.7■■■□□ 2.19
SPTBN4-203ENST00000392023 TSPOAP1O95153 1857 aa28.7■■■□□ 2.19
SPTBN4-203ENST00000392023 BRD4O60885 1362 aaPredicted RBP28.7■■■□□ 2.18
SPTBN4-203ENST00000392023 RICTORQ6R327 1708 aa28.7■■■□□ 2.18
SPTBN4-203ENST00000392023 TMEM132EQ6IEE7 984 aa28.69■■■□□ 2.18
SPTBN4-203ENST00000392023 NLRP13Q86W25 1043 aa28.68■■■□□ 2.18
SPTBN4-203ENST00000392023 TRAK1Q9UPV9 953 aa28.65■■■□□ 2.18
SPTBN4-203ENST00000392023 MYOM2P54296 1465 aa28.64■■■□□ 2.18
SPTBN4-203ENST00000392023 KNSTRNQ9Y448 316 aa28.63■■■□□ 2.17
SPTBN4-203ENST00000392023 SIGLEC1Q9BZZ2 1709 aa28.63■■■□□ 2.17
SPTBN4-203ENST00000392023 EIF3AQ14152 1382 aaKnown RBP28.62■■■□□ 2.17
SPTBN4-203ENST00000392023 ADGRB3O60242 1522 aa28.62■■■□□ 2.17
SPTBN4-203ENST00000392023 IFT172Q9UG01 1749 aa28.61■■■□□ 2.17
SPTBN4-203ENST00000392023 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
SPTBN4-203ENST00000392023 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
SPTBN4-203ENST00000392023 IDI1Q13907 227 aa28.61■■■□□ 2.17
SPTBN4-203ENST00000392023 NEURL4Q96JN8 1562 aa28.61■■■□□ 2.17
SPTBN4-203ENST00000392023 LRPPRCP42704 1394 aaKnown RBP28.6■■■□□ 2.17
SPTBN4-203ENST00000392023 CDCA8Q53HL2 280 aa28.6■■■□□ 2.17
SPTBN4-203ENST00000392023 KIAA1210Q9ULL0 1709 aa28.57■■■□□ 2.16
SPTBN4-203ENST00000392023 GLI2P10070 1586 aa28.57■■■□□ 2.16
SPTBN4-203ENST00000392023 FBXO31Q5XUX0 539 aaPredicted RBP28.57■■■□□ 2.16
SPTBN4-203ENST00000392023 DIP2BQ9P265 1576 aa28.56■■■□□ 2.16
SPTBN4-203ENST00000392023 C14orf93Q9H972 538 aaKnown RBP28.55■■■□□ 2.16
SPTBN4-203ENST00000392023 NRXN1Q9ULB1 1477 aa28.55■■■□□ 2.16
SPTBN4-203ENST00000392023 AMER1Q5JTC6 1135 aaPredicted RBP28.54■■■□□ 2.16
SPTBN4-203ENST00000392023 SYNMO15061 1565 aa28.53■■■□□ 2.16
SPTBN4-203ENST00000392023 MLECQ14165 292 aa28.53■■■□□ 2.16
SPTBN4-203ENST00000392023 NUDCQ9Y266 331 aa28.52■■■□□ 2.16
SPTBN4-203ENST00000392023 PPLO60437 1756 aa28.52■■■□□ 2.16
SPTBN4-203ENST00000392023 PIK3C2GO75747 1445 aa28.52■■■□□ 2.16
SPTBN4-203ENST00000392023 ERVK-7P63135 1459 aa28.51■■■□□ 2.15
SPTBN4-203ENST00000392023 CENPJQ9HC77 1338 aaPredicted RBP28.5■■■□□ 2.15
SPTBN4-203ENST00000392023 SMG6Q86US8 1419 aaKnown RBP28.49■■■□□ 2.15
SPTBN4-203ENST00000392023 PPP2R1AP30153 589 aa28.48■■■□□ 2.15
SPTBN4-203ENST00000392023 RPGRIP1LQ68CZ1 1315 aa28.47■■■□□ 2.15
SPTBN4-203ENST00000392023 SAFB2Q14151 953 aaKnown RBP eCLIP28.47■■■□□ 2.15
SPTBN4-203ENST00000392023 CARD14Q9BXL6 1004 aa28.47■■■□□ 2.15
SPTBN4-203ENST00000392023 MYOM1P52179 1685 aa28.46■■■□□ 2.15
SPTBN4-203ENST00000392023 VGFO15240 615 aaPredicted RBP28.46■■■□□ 2.15
SPTBN4-203ENST00000392023 KDM5AP29375 1690 aaKnown RBP28.44■■■□□ 2.14
SPTBN4-203ENST00000392023 STK26Q9P289 416 aa28.43■■■□□ 2.14
SPTBN4-203ENST00000392023 ADAMTS8Q9UP79 889 aa28.43■■■□□ 2.14
SPTBN4-203ENST00000392023 ARHGAP31Q2M1Z3 1444 aa28.42■■■□□ 2.14
SPTBN4-203ENST00000392023 SLC52A1Q9NWF4 448 aa28.42■■■□□ 2.14
SPTBN4-203ENST00000392023 PIK3C2BO00750 1634 aa28.42■■■□□ 2.14
SPTBN4-203ENST00000392023 SLC12A5Q9H2X9 1139 aa28.41■■■□□ 2.14
SPTBN4-203ENST00000392023 CDCA7LQ96GN5 454 aa28.4■■■□□ 2.14
SPTBN4-203ENST00000392023 ADGRB1O14514 1584 aa28.4■■■□□ 2.14
SPTBN4-203ENST00000392023 B4GALNT3Q6L9W6 998 aa28.39■■■□□ 2.14
SPTBN4-203ENST00000392023 ASXL1Q8IXJ9 1541 aa28.39■■■□□ 2.14
SPTBN4-203ENST00000392023 MYO5BQ9ULV0 1848 aa28.39■■■□□ 2.13
SPTBN4-203ENST00000392023 NEXMIFQ5QGS0 1516 aa28.38■■■□□ 2.13
SPTBN4-203ENST00000392023 SETBP1Q9Y6X0 1596 aa28.37■■■□□ 2.13
SPTBN4-203ENST00000392023 STAG3Q9UJ98 1225 aa28.37■■■□□ 2.13
SPTBN4-203ENST00000392023 ZMYM4Q5VZL5 1548 aa28.37■■■□□ 2.13
SPTBN4-203ENST00000392023 RBM19Q9Y4C8 960 aaKnown RBP28.37■■■□□ 2.13
SPTBN4-203ENST00000392023 ZC3H13Q5T200 1668 aaKnown RBP28.36■■■□□ 2.13
SPTBN4-203ENST00000392023 SLC24A1O60721 1099 aa28.35■■■□□ 2.13
SPTBN4-203ENST00000392023 PPP4R2Q9NY27 417 aa28.35■■■□□ 2.13
SPTBN4-203ENST00000392023 PREX1Q8TCU6 1659 aa28.34■■■□□ 2.13
SPTBN4-203ENST00000392023 TNNT2P45379 298 aaPredicted RBP28.33■■■□□ 2.13
SPTBN4-203ENST00000392023 WDR43Q15061 677 aaKnown RBP eCLIP28.32■■■□□ 2.12
SPTBN4-203ENST00000392023 QRICH2Q9H0J4 1663 aa28.32■■■□□ 2.12
SPTBN4-203ENST00000392023 MYO3AQ8NEV4 1616 aa28.31■■■□□ 2.12
SPTBN4-203ENST00000392023 SBNO2Q9Y2G9 1366 aa28.31■■■□□ 2.12
SPTBN4-203ENST00000392023 CABP2Q9NPB3 220 aa28.3■■■□□ 2.12
SPTBN4-203ENST00000392023 ERICH6BQ5W0A0 696 aa28.27■■■□□ 2.12
SPTBN4-203ENST00000392023 CCDC146Q8IYE0 955 aa28.27■■■□□ 2.12
SPTBN4-203ENST00000392023 TMEM131LA2VDJ0 1609 aa28.27■■■□□ 2.12
SPTBN4-203ENST00000392023 BLMP54132 1417 aaPredicted RBP28.26■■■□□ 2.12
SPTBN4-203ENST00000392023 KIF13AQ9H1H9 1805 aa28.25■■■□□ 2.11
SPTBN4-203ENST00000392023 CLTCQ00610 1675 aaKnown RBP28.24■■■□□ 2.11
SPTBN4-203ENST00000392023 RNF123Q5XPI4 1314 aa28.24■■■□□ 2.11
SPTBN4-203ENST00000392023 NSD3Q9BZ95 1437 aa28.24■■■□□ 2.11
SPTBN4-203ENST00000392023 NPC1L1Q9UHC9 1359 aa28.23■■■□□ 2.11
SPTBN4-203ENST00000392023 EVC2Q86UK5 1308 aa28.22■■■□□ 2.11
SPTBN4-203ENST00000392023 RCAN3Q9UKA8 241 aa28.21■■■□□ 2.11
SPTBN4-203ENST00000392023 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
SPTBN4-203ENST00000392023 PRAM1Q96QH2 718 aa28.2■■■□□ 2.11
SPTBN4-203ENST00000392023 ARHGEF28Q8N1W1 1705 aaKnown RBP28.19■■■□□ 2.1
SPTBN4-203ENST00000392023 MORC1Q86VD1 984 aa28.19■■■□□ 2.1
SPTBN4-203ENST00000392023 SRPK2P78362 688 aaKnown RBP28.19■■■□□ 2.1
SPTBN4-203ENST00000392023 PDE3BQ13370 1112 aa28.19■■■□□ 2.1
SPTBN4-203ENST00000392023 MSH5O43196 834 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms