RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 BECN2A8MW95 431 aa10.61□□□□□ -0.71
PKP4-202ENST00000389759 WASHC2CQ9Y4E1 1318 aa10.61□□□□□ -0.71
PKP4-202ENST00000389759 KIF3AQ9Y496 699 aa10.61□□□□□ -0.71
PKP4-202ENST00000389759 HSP90B1P14625 803 aaKnown RBP10.61□□□□□ -0.71
PKP4-202ENST00000389759 HDGFP51858 240 aaKnown RBP10.61□□□□□ -0.71
PKP4-202ENST00000389759 GOLGA6L1Q8N7Z2 621 aa10.6□□□□□ -0.71
PKP4-202ENST00000389759 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
PKP4-202ENST00000389759 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
PKP4-202ENST00000389759 API5Q9BZZ5 524 aaKnown RBP10.6□□□□□ -0.71
PKP4-202ENST00000389759 ZNF644Q9H582 1327 aaPredicted RBP10.6□□□□□ -0.71
PKP4-202ENST00000389759 PDS5BQ9NTI5 1447 aa10.6□□□□□ -0.71
PKP4-202ENST00000389759 ESPNB1AK53 854 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 RRP9O43818 475 aaKnown RBP10.59□□□□□ -0.71
PKP4-202ENST00000389759 CCDC173Q0VFZ6 552 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 SF3A1Q15459 793 aaKnown RBP10.59□□□□□ -0.71
PKP4-202ENST00000389759 ZNF592Q92610 1267 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 CCDC34Q96HJ3 373 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 MCM4P33991 863 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 CAVIN1Q6NZI2 390 aaKnown RBP10.59□□□□□ -0.71
PKP4-202ENST00000389759 RNF214Q8ND24 703 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 GRPEL1Q9HAV7 217 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 CUX1P39880 1505 aa10.59□□□□□ -0.71
PKP4-202ENST00000389759 RIPK4P57078 832 aa10.58□□□□□ -0.72
PKP4-202ENST00000389759 DIAPH3Q9NSV4 1193 aa10.58□□□□□ -0.72
PKP4-202ENST00000389759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.728e-7■■■□□ 15.7
PKP4-202ENST00000389759 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
PKP4-202ENST00000389759 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 CDC45O75419 566 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 NCOA2Q15596 1464 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 PPP2R1AP30153 589 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 H3BQV1 296 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 BCAR3O75815 825 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 MBD3O95983 291 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
PKP4-202ENST00000389759 HFM1A2PYH4 1435 aa10.56□□□□□ -0.72
PKP4-202ENST00000389759 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
PKP4-202ENST00000389759 EVC2Q86UK5 1308 aa10.56□□□□□ -0.72
PKP4-202ENST00000389759 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
PKP4-202ENST00000389759 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
PKP4-202ENST00000389759 JPH4Q96JJ6 628 aa10.56□□□□□ -0.72
PKP4-202ENST00000389759 RBM10P98175 930 aaKnown RBP10.56□□□□□ -0.72
PKP4-202ENST00000389759 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
PKP4-202ENST00000389759 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
PKP4-202ENST00000389759 HMGN5P82970 282 aaKnown RBP10.55□□□□□ -0.72
PKP4-202ENST00000389759 FAM184AQ8NB25 1140 aa10.55□□□□□ -0.72
PKP4-202ENST00000389759 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
PKP4-202ENST00000389759 ANKRD50Q9ULJ7 1429 aa10.55□□□□□ -0.72
PKP4-202ENST00000389759 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
PKP4-202ENST00000389759 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
PKP4-202ENST00000389759 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
PKP4-202ENST00000389759 ZKSCAN1P17029 563 aaPredicted RBP10.54□□□□□ -0.72
PKP4-202ENST00000389759 IFT57Q9NWB7 429 aa10.54□□□□□ -0.72
PKP4-202ENST00000389759 RUFY2Q8WXA3 655 aa10.54□□□□□ -0.72
PKP4-202ENST00000389759 CCAR2Q8N163 923 aaKnown RBP10.53□□□□□ -0.72
PKP4-202ENST00000389759 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
PKP4-202ENST00000389759 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
PKP4-202ENST00000389759 TPM3P06753 285 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 GPS2Q13227 327 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 PRXQ9BXM0 1461 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 RABEP1Q15276 862 aa10.53□□□□□ -0.72
PKP4-202ENST00000389759 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
PKP4-202ENST00000389759 MLECQ14165 292 aa10.52□□□□□ -0.72
PKP4-202ENST00000389759 TEX35Q5T0J7 233 aa10.52□□□□□ -0.72
PKP4-202ENST00000389759 GORABQ5T7V8 394 aa10.52□□□□□ -0.73
PKP4-202ENST00000389759 GNAI1P63096 354 aa10.52□□□□□ -0.73
PKP4-202ENST00000389759 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 MTHFSP49914 203 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 NBPF1Q3BBV0 1214 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 C11orf95C9JLR9 678 aaPredicted RBP10.51□□□□□ -0.73
PKP4-202ENST00000389759 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
PKP4-202ENST00000389759 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 HOMER1Q86YM7 354 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 NINLQ9Y2I6 1382 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 SASS6Q6UVJ0 657 aa10.51□□□□□ -0.73
PKP4-202ENST00000389759 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
PKP4-202ENST00000389759 AMPHP49418 695 aa10.5□□□□□ -0.73
PKP4-202ENST00000389759 NEK4P51957 841 aa10.5□□□□□ -0.73
PKP4-202ENST00000389759 CFTRP13569 1480 aa10.5□□□□□ -0.73
PKP4-202ENST00000389759 K7ELQ4 463 aaPredicted RBP10.5□□□□□ -0.73
PKP4-202ENST00000389759 ZSCAN30Q86W11 494 aa10.5□□□□□ -0.73
PKP4-202ENST00000389759 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
PKP4-202ENST00000389759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.49□□□□□ -0.733e-7■■■■□ 24.5
PKP4-202ENST00000389759 MCM2P49736 904 aa10.49□□□□□ -0.73
PKP4-202ENST00000389759 EXOSC9Q06265 439 aaKnown RBP10.49□□□□□ -0.73
PKP4-202ENST00000389759 COG3Q96JB2 828 aa10.49□□□□□ -0.73
PKP4-202ENST00000389759 A0A0U1RQG5 324 aaPredicted RBP10.49□□□□□ -0.73
PKP4-202ENST00000389759 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
PKP4-202ENST00000389759 GCC1Q96CN9 775 aa10.49□□□□□ -0.73
PKP4-202ENST00000389759 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
PKP4-202ENST00000389759 CREBRFQ8IUR6 639 aa10.48□□□□□ -0.73
PKP4-202ENST00000389759 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
PKP4-202ENST00000389759 FANCD2Q9BXW9 1451 aa10.48□□□□□ -0.73
PKP4-202ENST00000389759 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
PKP4-202ENST00000389759 UQCRHLA0A096LP55 91 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms