RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 NCOA1Q15788 1441 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 CASKIN1Q8WXD9 1431 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 MTERF4Q7Z6M4 381 aaKnown RBP7.13□□□□□ -1.27
RFC1-202ENST00000381897 KDM4AO75164 1064 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 MRE11P49959 708 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 SOX12O15370 315 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 SH3BP5O60239 455 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 EFCAB5A4FU69 1503 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 GPATCH11Q8N954 259 aa7.13□□□□□ -1.27
RFC1-202ENST00000381897 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
RFC1-202ENST00000381897 RBM26Q5T8P6 1007 aaKnown RBP7.12□□□□□ -1.27
RFC1-202ENST00000381897 SKOR2Q2VWA4 1001 aaPredicted RBP7.12□□□□□ -1.27
RFC1-202ENST00000381897 MYOM3Q5VTT5 1437 aa7.12□□□□□ -1.27
RFC1-202ENST00000381897 PLEKHD1A6NEE1 506 aa7.12□□□□□ -1.27
RFC1-202ENST00000381897 MIA2Q96PC5 1412 aa7.12□□□□□ -1.27
RFC1-202ENST00000381897 TDRD9Q8NDG6 1382 aaKnown RBP7.12□□□□□ -1.27
RFC1-202ENST00000381897 CRBNQ96SW2 442 aa7.12□□□□□ -1.27
RFC1-202ENST00000381897 GPBP1L1Q9HC44 474 aaPredicted RBP7.12□□□□□ -1.27
RFC1-202ENST00000381897 FHOD3Q2V2M9 1422 aa7.12□□□□□ -1.27
RFC1-202ENST00000381897 BIVM-ERCC5R4GMW8 1640 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 FRAT2O75474 233 aaPredicted RBP7.11□□□□□ -1.27
RFC1-202ENST00000381897 SLC4A3P48751 1232 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 CDCA8Q53HL2 280 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.11□□□□□ -1.27
RFC1-202ENST00000381897 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 RNF123Q5XPI4 1314 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 SLKQ9H2G2 1235 aaPredicted RBP7.11□□□□□ -1.27
RFC1-202ENST00000381897 R3HCC1Q9Y3T6 440 aaKnown RBP7.11□□□□□ -1.27
RFC1-202ENST00000381897 USP47Q96K76 1375 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 ANKRD13AQ8IZ07 590 aa7.11□□□□□ -1.27
RFC1-202ENST00000381897 NAP1L4Q99733 375 aaKnown RBP7.11□□□□□ -1.27
RFC1-202ENST00000381897 PMFBP1Q8TBY8 1022 aa7.1□□□□□ -1.27
RFC1-202ENST00000381897 SAFB2Q14151 953 aaKnown RBP eCLIP7.1□□□□□ -1.27
RFC1-202ENST00000381897 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
RFC1-202ENST00000381897 PLEKHH2Q8IVE3 1493 aa7.1□□□□□ -1.27
RFC1-202ENST00000381897 AQRO60306 1485 aaKnown RBP eCLIP7.1□□□□□ -1.272e-7■■■■■ 35.5
RFC1-202ENST00000381897 NESP48681 1621 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 PEG3Q9GZU2 1588 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 CCDC85CA6NKD9 419 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 PNISRQ8TF01 805 aaKnown RBP7.09□□□□□ -1.27
RFC1-202ENST00000381897 PTPN23Q9H3S7 1636 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 FYB1O15117 783 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 CAPN15O75808 1086 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 CCDC184Q52MB2 194 aa7.09□□□□□ -1.27
RFC1-202ENST00000381897 G3V3G9 751 aa7.09□□□□□ -1.28
RFC1-202ENST00000381897 SMARCA5O60264 1052 aaPredicted RBP7.09□□□□□ -1.28
RFC1-202ENST00000381897 PHF14O94880 888 aa7.09□□□□□ -1.28
RFC1-202ENST00000381897 HSP90AB1P08238 724 aaKnown RBP7.09□□□□□ -1.28
RFC1-202ENST00000381897 ABL2P42684 1182 aa7.09□□□□□ -1.28
RFC1-202ENST00000381897 HDGFP51858 240 aaKnown RBP7.09□□□□□ -1.28
RFC1-202ENST00000381897 CHMP5Q9NZZ3 219 aa7.09□□□□□ -1.28
RFC1-202ENST00000381897 BRPF1P55201 1214 aaPredicted RBP7.08□□□□□ -1.28
RFC1-202ENST00000381897 IGF1RP08069 1367 aa7.08□□□□□ -1.28
RFC1-202ENST00000381897 CFAP43Q8NDM7 1665 aa7.08□□□□□ -1.28
RFC1-202ENST00000381897 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
RFC1-202ENST00000381897 CLCN1P35523 988 aa7.08□□□□□ -1.28
RFC1-202ENST00000381897 FLIIQ13045 1269 aa7.08□□□□□ -1.28
RFC1-202ENST00000381897 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
RFC1-202ENST00000381897 KNSTRNQ9Y448 316 aa7.08□□□□□ -1.28
RFC1-202ENST00000381897 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 WDR75Q8IWA0 830 aaKnown RBP7.07□□□□□ -1.28
RFC1-202ENST00000381897 PDILTQ8N807 584 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 CGNL1Q0VF96 1302 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 HMGXB3Q12766 1538 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 BCL11BQ9C0K0 894 aaPredicted RBP7.07□□□□□ -1.28
RFC1-202ENST00000381897 PDCL3Q9H2J4 239 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 FGD5Q6ZNL6 1462 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 EHBP1L1Q8N3D4 1523 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 NAIPQ13075 1403 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 CT47A1Q5JQC4 288 aaPredicted RBP7.07□□□□□ -1.28
RFC1-202ENST00000381897 TTC16Q8NEE8 873 aa7.07□□□□□ -1.28
RFC1-202ENST00000381897 RWDD1Q9H446 243 aaPredicted RBP7.07□□□□□ -1.28
RFC1-202ENST00000381897 TSPY4P0CV99 314 aa7.06□□□□□ -1.28
RFC1-202ENST00000381897 TSPY10P0CW01 314 aa7.06□□□□□ -1.28
RFC1-202ENST00000381897 IFNLR1Q8IU57 520 aaPredicted RBP7.06□□□□□ -1.28
RFC1-202ENST00000381897 NGEFQ8N5V2 710 aa7.06□□□□□ -1.28
RFC1-202ENST00000381897 PCF11O94913 1555 aaKnown RBP7.06□□□□□ -1.28
RFC1-202ENST00000381897 NINLQ9Y2I6 1382 aa7.06□□□□□ -1.28
RFC1-202ENST00000381897 TMF1P82094 1093 aa7.06□□□□□ -1.28
RFC1-202ENST00000381897 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
RFC1-202ENST00000381897 ATXN8OSP0DMR3 200 aa7.05□□□□□ -1.28
RFC1-202ENST00000381897 DNTTIP2Q5QJE6 756 aaKnown RBP7.05□□□□□ -1.28
RFC1-202ENST00000381897 PUS7Q96PZ0 661 aaKnown RBP7.05□□□□□ -1.28
RFC1-202ENST00000381897 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
RFC1-202ENST00000381897 MRC2Q9UBG0 1479 aa7.05□□□□□ -1.28
RFC1-202ENST00000381897 ANKRD30AQ9BXX3 1397 aa7.05□□□□□ -1.28
RFC1-202ENST00000381897 CCDC173Q0VFZ6 552 aa7.05□□□□□ -1.28
RFC1-202ENST00000381897 GPIHBP1Q8IV16 184 aa7.05□□□□□ -1.28
RFC1-202ENST00000381897 CHMP4BQ9H444 224 aaKnown RBP7.05□□□□□ -1.28
RFC1-202ENST00000381897 ESPNB1AK53 854 aa7.04□□□□□ -1.28
RFC1-202ENST00000381897 IGSF3O75054 1194 aa7.04□□□□□ -1.28
RFC1-202ENST00000381897 hCG_2014768A0A024R1R8 64 aa7.04□□□□□ -1.28
RFC1-202ENST00000381897 PLIN1O60240 522 aa7.04□□□□□ -1.28
RFC1-202ENST00000381897 TICAM2Q86XR7 235 aa7.04□□□□□ -1.28
RFC1-202ENST00000381897 CHAF1AQ13111 956 aaPredicted RBP7.04□□□□□ -1.28
RFC1-202ENST00000381897 CC2D1BQ5T0F9 858 aaKnown RBP7.04□□□□□ -1.28
RFC1-202ENST00000381897 FAM177A1Q8N128 213 aaPredicted RBP7.04□□□□□ -1.28
RFC1-202ENST00000381897 CEP89Q96ST8 783 aa7.04□□□□□ -1.28
RFC1-202ENST00000381897 FANCD2Q9BXW9 1451 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms