RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ZNF326Q5BKZ1 582 aaKnown RBP28.58■■■□□ 2.17
GTF3A-201ENST00000381140 PPP1R15AO75807 674 aaPredicted RBP28.56■■■□□ 2.16
GTF3A-201ENST00000381140 NUTM2DQ5VT03 806 aaPredicted RBP28.56■■■□□ 2.16
GTF3A-201ENST00000381140 CCDC144AA2RUR9 1427 aa28.56■■■□□ 2.16
GTF3A-201ENST00000381140 ZFYVE9O95405 1425 aa28.54■■■□□ 2.16
GTF3A-201ENST00000381140 BCANQ96GW7 911 aa28.53■■■□□ 2.16
GTF3A-201ENST00000381140 HDGFP51858 240 aaKnown RBP28.51■■■□□ 2.16
GTF3A-201ENST00000381140 ZNF335Q9H4Z2 1342 aaPredicted RBP28.5■■■□□ 2.15
GTF3A-201ENST00000381140 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.49■■■□□ 2.15
GTF3A-201ENST00000381140 NEXMIFQ5QGS0 1516 aa28.44■■■□□ 2.14
GTF3A-201ENST00000381140 SLC26A8Q96RN1 970 aa28.44■■■□□ 2.14
GTF3A-201ENST00000381140 PLEKHG1Q9ULL1 1385 aa28.43■■■□□ 2.14
GTF3A-201ENST00000381140 RGL3Q3MIN7 710 aa28.43■■■□□ 2.14
GTF3A-201ENST00000381140 PPLO60437 1756 aa28.43■■■□□ 2.14
GTF3A-201ENST00000381140 ANKRD30BQ9BXX2 1392 aa28.43■■■□□ 2.14
GTF3A-201ENST00000381140 LTBP4Q8N2S1 1624 aa28.43■■■□□ 2.14
GTF3A-201ENST00000381140 PCGF6Q9BYE7 350 aa28.42■■■□□ 2.14
GTF3A-201ENST00000381140 STRCP1A6NGW2 1772 aa28.39■■■□□ 2.14
GTF3A-201ENST00000381140 SPATA31E1Q6ZUB1 1445 aa28.37■■■□□ 2.13
GTF3A-201ENST00000381140 CERKQ8TCT0 537 aa28.37■■■□□ 2.13
GTF3A-201ENST00000381140 IFT172Q9UG01 1749 aa28.35■■■□□ 2.13
GTF3A-201ENST00000381140 RPGRIP1LQ68CZ1 1315 aa28.34■■■□□ 2.13
GTF3A-201ENST00000381140 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
GTF3A-201ENST00000381140 VGFO15240 615 aaPredicted RBP28.31■■■□□ 2.12
GTF3A-201ENST00000381140 ADAMTS13Q76LX8 1427 aa28.31■■■□□ 2.12
GTF3A-201ENST00000381140 CPS1P31327 1500 aa28.3■■■□□ 2.12
GTF3A-201ENST00000381140 DIP2AQ14689 1571 aa28.3■■■□□ 2.12
GTF3A-201ENST00000381140 SETBP1Q9Y6X0 1596 aa28.3■■■□□ 2.12
GTF3A-201ENST00000381140 DHX57Q6P158 1386 aaKnown RBP28.29■■■□□ 2.12
GTF3A-201ENST00000381140 CHD2O14647 1828 aaKnown RBP28.28■■■□□ 2.12
GTF3A-201ENST00000381140 TBX22Q9Y458 520 aa28.26■■■□□ 2.12
GTF3A-201ENST00000381140 ADGRF5Q8IZF2 1346 aa28.23■■■□□ 2.11
GTF3A-201ENST00000381140 KCNA6P17658 529 aa28.23■■■□□ 2.11
GTF3A-201ENST00000381140 NWD1Q149M9 1564 aa28.22■■■□□ 2.11
GTF3A-201ENST00000381140 LRRC7Q96NW7 1537 aa28.2■■■□□ 2.11
GTF3A-201ENST00000381140 SETD1AO15047 1707 aaKnown RBP28.2■■■□□ 2.1
GTF3A-201ENST00000381140 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
GTF3A-201ENST00000381140 ALKQ9UM73 1620 aa28.19■■■□□ 2.1
GTF3A-201ENST00000381140 KDM2AQ9Y2K7 1162 aa28.18■■■□□ 2.1
GTF3A-201ENST00000381140 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
GTF3A-201ENST00000381140 METP08581 1390 aa28.17■■■□□ 2.1
GTF3A-201ENST00000381140 IQSEC2Q5JU85 1478 aa28.17■■■□□ 2.1
GTF3A-201ENST00000381140 DCAF11Q8TEB1 546 aa28.16■■■□□ 2.1
GTF3A-201ENST00000381140 NEUROD1Q13562 356 aa28.15■■■□□ 2.1
GTF3A-201ENST00000381140 PROSER2Q86WR7 435 aaPredicted RBP28.15■■■□□ 2.1
GTF3A-201ENST00000381140 RBM33Q96EV2 1170 aaKnown RBP28.15■■■□□ 2.1
GTF3A-201ENST00000381140 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
GTF3A-201ENST00000381140 NKTRP30414 1462 aaKnown RBP28.15■■■□□ 2.1
GTF3A-201ENST00000381140 MYOM2P54296 1465 aa28.15■■■□□ 2.1
GTF3A-201ENST00000381140 PTPRUQ92729 1446 aa28.14■■■□□ 2.1
GTF3A-201ENST00000381140 AMOTL2Q9Y2J4 779 aa28.12■■■□□ 2.09
GTF3A-201ENST00000381140 XRN1Q8IZH2 1706 aaKnown RBP28.12■■■□□ 2.09
GTF3A-201ENST00000381140 PIK3C2GO75747 1445 aa28.12■■■□□ 2.09
GTF3A-201ENST00000381140 FBXO41Q8TF61 875 aa28.11■■■□□ 2.09
GTF3A-201ENST00000381140 TMEM94Q12767 1356 aa28.1■■■□□ 2.09
GTF3A-201ENST00000381140 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
GTF3A-201ENST00000381140 UBAP1LF5GYI3 381 aa28.08■■■□□ 2.09
GTF3A-201ENST00000381140 LAMC1P11047 1609 aa28.07■■■□□ 2.08
GTF3A-201ENST00000381140 ILDR1Q86SU0 546 aaPredicted RBP28.06■■■□□ 2.08
GTF3A-201ENST00000381140 C14orf37Q86TY3 774 aa28.04■■■□□ 2.08
GTF3A-201ENST00000381140 CFAP70Q5T0N1 1121 aa28.03■■■□□ 2.08
GTF3A-201ENST00000381140 TMEM132EQ6IEE7 984 aa28.03■■■□□ 2.08
GTF3A-201ENST00000381140 ASXL1Q8IXJ9 1541 aa28.03■■■□□ 2.08
GTF3A-201ENST00000381140 STK26Q9P289 416 aa28.01■■■□□ 2.07
GTF3A-201ENST00000381140 C14orf93Q9H972 538 aaKnown RBP28■■■□□ 2.07
GTF3A-201ENST00000381140 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
GTF3A-201ENST00000381140 STAC3Q96MF2 364 aa27.99■■■□□ 2.07
GTF3A-201ENST00000381140 TOM1O60784 492 aa27.99■■■□□ 2.07
GTF3A-201ENST00000381140 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
GTF3A-201ENST00000381140 PIP4K2BP78356 416 aa27.97■■■□□ 2.07
GTF3A-201ENST00000381140 MSH6P52701 1360 aa27.96■■■□□ 2.07
GTF3A-201ENST00000381140 KNDC1Q76NI1 1749 aa27.95■■■□□ 2.06
GTF3A-201ENST00000381140 ROBO2Q9HCK4 1378 aa27.94■■■□□ 2.06
GTF3A-201ENST00000381140 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.94■■■□□ 2.06
GTF3A-201ENST00000381140 LRPPRCP42704 1394 aaKnown RBP27.94■■■□□ 2.06
GTF3A-201ENST00000381140 YTHDC2Q9H6S0 1430 aaKnown RBP27.93■■■□□ 2.06
GTF3A-201ENST00000381140 PTCH1Q13635 1447 aa27.93■■■□□ 2.06
GTF3A-201ENST00000381140 NALCNQ8IZF0 1738 aa27.92■■■□□ 2.06
GTF3A-201ENST00000381140 TONSLQ96HA7 1378 aa27.92■■■□□ 2.06
GTF3A-201ENST00000381140 NCOA3Q9Y6Q9 1424 aa27.91■■■□□ 2.06
GTF3A-201ENST00000381140 PRAG1Q86YV5 1406 aa27.9■■■□□ 2.06
GTF3A-201ENST00000381140 KIAA1210Q9ULL0 1709 aa27.89■■■□□ 2.06
GTF3A-201ENST00000381140 ADGRB1O14514 1584 aa27.89■■■□□ 2.05
GTF3A-201ENST00000381140 CCER1Q8TC90 406 aaPredicted RBP27.88■■■□□ 2.05
GTF3A-201ENST00000381140 ABCC11Q96J66 1382 aa27.87■■■□□ 2.05
GTF3A-201ENST00000381140 C19orf44Q9H6X5 657 aa27.86■■■□□ 2.05
GTF3A-201ENST00000381140 TECPR2O15040 1411 aa27.86■■■□□ 2.05
GTF3A-201ENST00000381140 ATF3P18847 181 aa27.86■■■□□ 2.05
GTF3A-201ENST00000381140 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
GTF3A-201ENST00000381140 ADGRL3Q9HAR2 1447 aa27.84■■■□□ 2.05
GTF3A-201ENST00000381140 TRAK1Q9UPV9 953 aa27.83■■■□□ 2.05
GTF3A-201ENST00000381140 PLEKHH1Q9ULM0 1364 aa27.82■■■□□ 2.04
GTF3A-201ENST00000381140 TRPM1Q7Z4N2 1603 aa27.81■■■□□ 2.04
GTF3A-201ENST00000381140 NBPF1Q3BBV0 1214 aa27.8■■■□□ 2.04
GTF3A-201ENST00000381140 CADPS2Q86UW7 1296 aa27.8■■■□□ 2.04
GTF3A-201ENST00000381140 SAFB2Q14151 953 aaKnown RBP eCLIP27.79■■■□□ 2.04
GTF3A-201ENST00000381140 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
GTF3A-201ENST00000381140 PRAM1Q96QH2 718 aa27.78■■■□□ 2.04
GTF3A-201ENST00000381140 SLAIN2Q9P270 581 aa27.78■■■□□ 2.04
GTF3A-201ENST00000381140 ARHGEF28Q8N1W1 1705 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms