RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ADGRF5Q8IZF2 1346 aa27.42■■□□□ 1.98
PDLIM5-205ENST00000380180 TESK2Q96S53 571 aa27.41■■□□□ 1.98
PDLIM5-205ENST00000380180 PREX1Q8TCU6 1659 aa27.39■■□□□ 1.98
PDLIM5-205ENST00000380180 NRXN1Q9ULB1 1477 aa27.37■■□□□ 1.97
PDLIM5-205ENST00000380180 ARHGEF40Q8TER5 1519 aa27.37■■□□□ 1.97
PDLIM5-205ENST00000380180 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
PDLIM5-205ENST00000380180 SCAF11Q99590 1463 aaKnown RBP27.35■■□□□ 1.97
PDLIM5-205ENST00000380180 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
PDLIM5-205ENST00000380180 GTF3C3Q9Y5Q9 886 aa27.34■■□□□ 1.97
PDLIM5-205ENST00000380180 DISP3Q9P2K9 1392 aa27.34■■□□□ 1.97
PDLIM5-205ENST00000380180 RPGRIP1LQ68CZ1 1315 aa27.33■■□□□ 1.97
PDLIM5-205ENST00000380180 CLTCQ00610 1675 aaKnown RBP27.33■■□□□ 1.97
PDLIM5-205ENST00000380180 IDI1Q13907 227 aa27.32■■□□□ 1.96
PDLIM5-205ENST00000380180 MYO5BQ9ULV0 1848 aa27.32■■□□□ 1.96
PDLIM5-205ENST00000380180 TMF1P82094 1093 aa27.31■■□□□ 1.96
PDLIM5-205ENST00000380180 SLC52A1Q9NWF4 448 aa27.31■■□□□ 1.96
PDLIM5-205ENST00000380180 CCDC184Q52MB2 194 aa27.29■■□□□ 1.96
PDLIM5-205ENST00000380180 FBXO31Q5XUX0 539 aaPredicted RBP27.28■■□□□ 1.96
PDLIM5-205ENST00000380180 MLECQ14165 292 aa27.27■■□□□ 1.96
PDLIM5-205ENST00000380180 PIK3C2GO75747 1445 aa27.26■■□□□ 1.95
PDLIM5-205ENST00000380180 NEXMIFQ5QGS0 1516 aa27.25■■□□□ 1.95
PDLIM5-205ENST00000380180 EIF3AQ14152 1382 aaKnown RBP27.25■■□□□ 1.95
PDLIM5-205ENST00000380180 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
PDLIM5-205ENST00000380180 CNGB1Q14028 1251 aaPredicted RBP27.24■■□□□ 1.95
PDLIM5-205ENST00000380180 TMEM131LA2VDJ0 1609 aa27.24■■□□□ 1.95
PDLIM5-205ENST00000380180 ERVK-7P63135 1459 aa27.23■■□□□ 1.95
PDLIM5-205ENST00000380180 C14orf93Q9H972 538 aaKnown RBP27.23■■□□□ 1.95
PDLIM5-205ENST00000380180 VGFO15240 615 aaPredicted RBP27.21■■□□□ 1.95
PDLIM5-205ENST00000380180 NUTM2DQ5VT03 806 aaPredicted RBP27.2■■□□□ 1.94
PDLIM5-205ENST00000380180 MRS2Q9HD23 443 aa27.2■■□□□ 1.94
PDLIM5-205ENST00000380180 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
PDLIM5-205ENST00000380180 ADGRB1O14514 1584 aa27.15■■□□□ 1.94
PDLIM5-205ENST00000380180 MYO3AQ8NEV4 1616 aa27.15■■□□□ 1.94
PDLIM5-205ENST00000380180 SPATA31D1Q6ZQQ2 1576 aa27.15■■□□□ 1.94
PDLIM5-205ENST00000380180 CDCA8Q53HL2 280 aa27.14■■□□□ 1.94
PDLIM5-205ENST00000380180 ZFYVE9O95405 1425 aa27.14■■□□□ 1.93
PDLIM5-205ENST00000380180 PANK3Q9H999 370 aa27.13■■□□□ 1.93
PDLIM5-205ENST00000380180 TMEM132EQ6IEE7 984 aa27.12■■□□□ 1.93
PDLIM5-205ENST00000380180 ESF1Q9H501 851 aaKnown RBP27.12■■□□□ 1.93
PDLIM5-205ENST00000380180 KTN1Q86UP2 1357 aaKnown RBP27.11■■□□□ 1.93
PDLIM5-205ENST00000380180 KDM5AP29375 1690 aaKnown RBP27.11■■□□□ 1.93
PDLIM5-205ENST00000380180 SLC24A1O60721 1099 aa27.11■■□□□ 1.93
PDLIM5-205ENST00000380180 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
PDLIM5-205ENST00000380180 FAM9BQ8IZU0 186 aa27.1■■□□□ 1.93
PDLIM5-205ENST00000380180 RALBP1Q15311 655 aa27.09■■□□□ 1.93
PDLIM5-205ENST00000380180 TRAK1Q9UPV9 953 aa27.09■■□□□ 1.93
PDLIM5-205ENST00000380180 ZMYM3Q14202 1370 aa27.09■■□□□ 1.93
PDLIM5-205ENST00000380180 HNRNPUQ00839 825 aaKnown RBP eCLIP27.09■■□□□ 1.93
PDLIM5-205ENST00000380180 STAG3Q9UJ98 1225 aa27.08■■□□□ 1.93
PDLIM5-205ENST00000380180 MYOM1P52179 1685 aa27.07■■□□□ 1.92
PDLIM5-205ENST00000380180 CENPJQ9HC77 1338 aaPredicted RBP27.06■■□□□ 1.92
PDLIM5-205ENST00000380180 QRICH2Q9H0J4 1663 aa27.05■■□□□ 1.92
PDLIM5-205ENST00000380180 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
PDLIM5-205ENST00000380180 MYBBP1AQ9BQG0 1328 aaKnown RBP27.03■■□□□ 1.92
PDLIM5-205ENST00000380180 PARD3Q8TEW0 1356 aa27.03■■□□□ 1.92
PDLIM5-205ENST00000380180 ARHGEF28Q8N1W1 1705 aaKnown RBP27.02■■□□□ 1.92
PDLIM5-205ENST00000380180 A2ML1A8K2U0 1454 aa27.02■■□□□ 1.92
PDLIM5-205ENST00000380180 TMC1Q8TDI8 760 aa27■■□□□ 1.91
PDLIM5-205ENST00000380180 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
PDLIM5-205ENST00000380180 CC2D1BQ5T0F9 858 aaKnown RBP26.99■■□□□ 1.91
PDLIM5-205ENST00000380180 ASXL1Q8IXJ9 1541 aa26.97■■□□□ 1.91
PDLIM5-205ENST00000380180 BRD4O60885 1362 aaPredicted RBP26.97■■□□□ 1.91
PDLIM5-205ENST00000380180 KNSTRNQ9Y448 316 aa26.95■■□□□ 1.91
PDLIM5-205ENST00000380180 PNISRQ8TF01 805 aaKnown RBP26.95■■□□□ 1.9
PDLIM5-205ENST00000380180 ALKQ9UM73 1620 aa26.93■■□□□ 1.9
PDLIM5-205ENST00000380180 RIMS2Q9UQ26 1411 aa26.93■■□□□ 1.9
PDLIM5-205ENST00000380180 NLRP13Q86W25 1043 aa26.92■■□□□ 1.9
PDLIM5-205ENST00000380180 TNRQ92752 1358 aa26.91■■□□□ 1.9
PDLIM5-205ENST00000380180 STK26Q9P289 416 aa26.9■■□□□ 1.9
PDLIM5-205ENST00000380180 AMER1Q5JTC6 1135 aaPredicted RBP26.89■■□□□ 1.89
PDLIM5-205ENST00000380180 YTHDC2Q9H6S0 1430 aaKnown RBP26.87■■□□□ 1.89
PDLIM5-205ENST00000380180 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
PDLIM5-205ENST00000380180 FER1L4A9Z1Z3 1794 aa26.85■■□□□ 1.89
PDLIM5-205ENST00000380180 SETD1AO15047 1707 aaKnown RBP26.85■■□□□ 1.89
PDLIM5-205ENST00000380180 ZBED9Q6R2W3 1325 aa26.85■■□□□ 1.89
PDLIM5-205ENST00000380180 PTPRMP28827 1452 aa26.84■■□□□ 1.89
PDLIM5-205ENST00000380180 C3P01024 1663 aa26.83■■□□□ 1.89
PDLIM5-205ENST00000380180 LRPPRCP42704 1394 aaKnown RBP26.83■■□□□ 1.89
PDLIM5-205ENST00000380180 EVC2Q86UK5 1308 aa26.83■■□□□ 1.89
PDLIM5-205ENST00000380180 TULP4Q9NRJ4 1543 aa26.83■■□□□ 1.88
PDLIM5-205ENST00000380180 CEBPAP49715 358 aaPredicted RBP26.82■■□□□ 1.88
PDLIM5-205ENST00000380180 SAFB2Q14151 953 aaKnown RBP eCLIP26.82■■□□□ 1.88
PDLIM5-205ENST00000380180 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.82■■□□□ 1.88
PDLIM5-205ENST00000380180 CARD14Q9BXL6 1004 aa26.82■■□□□ 1.88
PDLIM5-205ENST00000380180 NPC1L1Q9UHC9 1359 aa26.82■■□□□ 1.88
PDLIM5-205ENST00000380180 PUS7Q96PZ0 661 aaKnown RBP26.8■■□□□ 1.88
PDLIM5-205ENST00000380180 NRXN3Q9Y4C0 1643 aa26.8■■□□□ 1.88
PDLIM5-205ENST00000380180 SLC12A5Q9H2X9 1139 aa26.79■■□□□ 1.88
PDLIM5-205ENST00000380180 PRAM1Q96QH2 718 aa26.78■■□□□ 1.88
PDLIM5-205ENST00000380180 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
PDLIM5-205ENST00000380180 POGKQ9P215 609 aa26.77■■□□□ 1.88
PDLIM5-205ENST00000380180 PPP2R1AP30153 589 aa26.75■■□□□ 1.87
PDLIM5-205ENST00000380180 TMEM2Q9UHN6 1383 aa26.75■■□□□ 1.87
PDLIM5-205ENST00000380180 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
PDLIM5-205ENST00000380180 CABP2Q9NPB3 220 aa26.74■■□□□ 1.87
PDLIM5-205ENST00000380180 SUPT16HQ9Y5B9 1047 aaKnown RBP26.73■■□□□ 1.87
PDLIM5-205ENST00000380180 MINK1Q8N4C8 1332 aaPredicted RBP26.72■■□□□ 1.87
PDLIM5-205ENST00000380180 DLC1Q96QB1 1528 aa26.71■■□□□ 1.87
PDLIM5-205ENST00000380180 PLPPR3Q6T4P5 718 aa26.7■■□□□ 1.87
PDLIM5-205ENST00000380180 NSD3Q9BZ95 1437 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms