RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 TXNDC2Q86VQ3 553 aa39.37■■■■□ 3.89
ATRAID-201ENST00000380171 ANKRD30BQ9BXX2 1392 aa39.34■■■■□ 3.89
ATRAID-201ENST00000380171 LTKP29376 864 aa39.34■■■■□ 3.89
ATRAID-201ENST00000380171 ZNF326Q5BKZ1 582 aaKnown RBP39.33■■■■□ 3.89
ATRAID-201ENST00000380171 NEXMIFQ5QGS0 1516 aa39.29■■■■□ 3.88
ATRAID-201ENST00000380171 PPP1R15AO75807 674 aaPredicted RBP39.28■■■■□ 3.88
ATRAID-201ENST00000380171 HDGFP51858 240 aaKnown RBP39.27■■■■□ 3.88
ATRAID-201ENST00000380171 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.25■■■■□ 3.87
ATRAID-201ENST00000380171 SPATA31E1Q6ZUB1 1445 aa39.24■■■■□ 3.87
ATRAID-201ENST00000380171 DHX57Q6P158 1386 aaKnown RBP39.24■■■■□ 3.87
ATRAID-201ENST00000380171 PPLO60437 1756 aa39.23■■■■□ 3.87
ATRAID-201ENST00000380171 NUTM2DQ5VT03 806 aaPredicted RBP39.21■■■■□ 3.87
ATRAID-201ENST00000380171 PLEKHG1Q9ULL1 1385 aa39.2■■■■□ 3.87
ATRAID-201ENST00000380171 IFT172Q9UG01 1749 aa39.19■■■■□ 3.86
ATRAID-201ENST00000380171 BCANQ96GW7 911 aa39.15■■■■□ 3.86
ATRAID-201ENST00000380171 RPGRIP1LQ68CZ1 1315 aa39.14■■■■□ 3.86
ATRAID-201ENST00000380171 RGL3Q3MIN7 710 aa39.14■■■■□ 3.86
ATRAID-201ENST00000380171 SENP3Q9H4L4 574 aaPredicted RBP39.13■■■■□ 3.85
ATRAID-201ENST00000380171 DIP2AQ14689 1571 aa39.08■■■■□ 3.85
ATRAID-201ENST00000380171 SETBP1Q9Y6X0 1596 aa39.08■■■■□ 3.85
ATRAID-201ENST00000380171 NRXN3Q9Y4C0 1643 aa39.08■■■■□ 3.85
ATRAID-201ENST00000380171 ZNF335Q9H4Z2 1342 aaPredicted RBP39.07■■■■□ 3.84
ATRAID-201ENST00000380171 SLC26A8Q96RN1 970 aa39.05■■■■□ 3.84
ATRAID-201ENST00000380171 VGFO15240 615 aaPredicted RBP39.03■■■■□ 3.84
ATRAID-201ENST00000380171 LTBP4Q8N2S1 1624 aa39.03■■■■□ 3.84
ATRAID-201ENST00000380171 ADAMTS13Q76LX8 1427 aa39.02■■■■□ 3.84
ATRAID-201ENST00000380171 STRCP1A6NGW2 1772 aa38.98■■■■□ 3.83
ATRAID-201ENST00000380171 MYOM2P54296 1465 aa38.98■■■■□ 3.83
ATRAID-201ENST00000380171 CPS1P31327 1500 aa38.95■■■■□ 3.83
ATRAID-201ENST00000380171 NWD1Q149M9 1564 aa38.93■■■■□ 3.82
ATRAID-201ENST00000380171 SETD1AO15047 1707 aaKnown RBP38.92■■■■□ 3.82
ATRAID-201ENST00000380171 TBX22Q9Y458 520 aa38.92■■■■□ 3.82
ATRAID-201ENST00000380171 ADGRF5Q8IZF2 1346 aa38.91■■■■□ 3.82
ATRAID-201ENST00000380171 CHD2O14647 1828 aaKnown RBP38.91■■■■□ 3.82
ATRAID-201ENST00000380171 SIN3AQ96ST3 1273 aa38.9■■■■□ 3.82
ATRAID-201ENST00000380171 ALKQ9UM73 1620 aa38.89■■■■□ 3.82
ATRAID-201ENST00000380171 PIK3C2GO75747 1445 aa38.88■■■■□ 3.81
ATRAID-201ENST00000380171 NRXN1Q9ULB1 1477 aa38.87■■■■□ 3.81
ATRAID-201ENST00000380171 NEUROD1Q13562 356 aa38.86■■■■□ 3.81
ATRAID-201ENST00000380171 PIK3R4Q99570 1358 aa38.85■■■■□ 3.81
ATRAID-201ENST00000380171 DCAF11Q8TEB1 546 aa38.84■■■■□ 3.81
ATRAID-201ENST00000380171 LAMC1P11047 1609 aa38.84■■■■□ 3.81
ATRAID-201ENST00000380171 NKTRP30414 1462 aaKnown RBP38.82■■■■□ 3.81
ATRAID-201ENST00000380171 KCNA6P17658 529 aa38.81■■■■□ 3.8
ATRAID-201ENST00000380171 CERKQ8TCT0 537 aa38.8■■■■□ 3.8
ATRAID-201ENST00000380171 KDM2AQ9Y2K7 1162 aa38.8■■■■□ 3.8
ATRAID-201ENST00000380171 XRN1Q8IZH2 1706 aaKnown RBP38.79■■■■□ 3.8
ATRAID-201ENST00000380171 METP08581 1390 aa38.79■■■■□ 3.8
ATRAID-201ENST00000380171 LRRC7Q96NW7 1537 aa38.76■■■■□ 3.8
ATRAID-201ENST00000380171 IQSEC2Q5JU85 1478 aa38.75■■■■□ 3.79
ATRAID-201ENST00000380171 PTPRUQ92729 1446 aa38.75■■■■□ 3.79
ATRAID-201ENST00000380171 STAC3Q96MF2 364 aa38.75■■■■□ 3.79
ATRAID-201ENST00000380171 ASXL1Q8IXJ9 1541 aa38.72■■■■□ 3.79
ATRAID-201ENST00000380171 XIRP1Q702N8 1843 aaKnown RBP38.7■■■■□ 3.79
ATRAID-201ENST00000380171 L3MBTL2Q969R5 705 aa38.68■■■■□ 3.78
ATRAID-201ENST00000380171 AMOTL2Q9Y2J4 779 aa38.68■■■■□ 3.78
ATRAID-201ENST00000380171 TONSLQ96HA7 1378 aa38.68■■■■□ 3.78
ATRAID-201ENST00000380171 CCER1Q8TC90 406 aaPredicted RBP38.67■■■■□ 3.78
ATRAID-201ENST00000380171 CLSPNQ9HAW4 1339 aa38.66■■■■□ 3.78
ATRAID-201ENST00000380171 PROSER2Q86WR7 435 aaPredicted RBP38.64■■■■□ 3.78
ATRAID-201ENST00000380171 C14orf93Q9H972 538 aaKnown RBP38.64■■■■□ 3.78
ATRAID-201ENST00000380171 CFAP70Q5T0N1 1121 aa38.63■■■■□ 3.77
ATRAID-201ENST00000380171 PRAG1Q86YV5 1406 aa38.63■■■■□ 3.77
ATRAID-201ENST00000380171 TMEM94Q12767 1356 aa38.62■■■■□ 3.77
ATRAID-201ENST00000380171 KNDC1Q76NI1 1749 aa38.62■■■■□ 3.77
ATRAID-201ENST00000380171 KIAA1210Q9ULL0 1709 aa38.61■■■■□ 3.77
ATRAID-201ENST00000380171 PTCH1Q13635 1447 aa38.58■■■■□ 3.77
ATRAID-201ENST00000380171 TMEM132EQ6IEE7 984 aa38.57■■■■□ 3.76
ATRAID-201ENST00000380171 ADGRB1O14514 1584 aa38.57■■■■□ 3.76
ATRAID-201ENST00000380171 LRPPRCP42704 1394 aaKnown RBP38.56■■■■□ 3.76
ATRAID-201ENST00000380171 YTHDC2Q9H6S0 1430 aaKnown RBP38.55■■■■□ 3.76
ATRAID-201ENST00000380171 RBM33Q96EV2 1170 aaKnown RBP38.55■■■■□ 3.76
ATRAID-201ENST00000380171 TECPR2O15040 1411 aa38.52■■■■□ 3.76
ATRAID-201ENST00000380171 STK26Q9P289 416 aa38.51■■■■□ 3.76
ATRAID-201ENST00000380171 ROBO2Q9HCK4 1378 aa38.5■■■■□ 3.75
ATRAID-201ENST00000380171 TRPM1Q7Z4N2 1603 aa38.49■■■■□ 3.75
ATRAID-201ENST00000380171 NCOA3Q9Y6Q9 1424 aa38.48■■■■□ 3.75
ATRAID-201ENST00000380171 C14orf37Q86TY3 774 aa38.48■■■■□ 3.75
ATRAID-201ENST00000380171 NALCNQ8IZF0 1738 aa38.46■■■■□ 3.75
ATRAID-201ENST00000380171 MSH6P52701 1360 aa38.46■■■■□ 3.75
ATRAID-201ENST00000380171 ABCC11Q96J66 1382 aa38.46■■■■□ 3.75
ATRAID-201ENST00000380171 UBAP1LF5GYI3 381 aa38.43■■■■□ 3.74
ATRAID-201ENST00000380171 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.42■■■■□ 3.74
ATRAID-201ENST00000380171 DLC1Q96QB1 1528 aa38.41■■■■□ 3.74
ATRAID-201ENST00000380171 FBXO41Q8TF61 875 aa38.4■■■■□ 3.74
ATRAID-201ENST00000380171 ADGRL3Q9HAR2 1447 aa38.39■■■■□ 3.74
ATRAID-201ENST00000380171 ARHGEF28Q8N1W1 1705 aaKnown RBP38.38■■■■□ 3.73
ATRAID-201ENST00000380171 FAM135BQ49AJ0 1406 aa38.37■■■■□ 3.73
ATRAID-201ENST00000380171 TOM1O60784 492 aa38.36■■■■□ 3.73
ATRAID-201ENST00000380171 NBPF1Q3BBV0 1214 aa38.34■■■■□ 3.73
ATRAID-201ENST00000380171 NBPF8Q3BBV2 869 aa38.34■■■■□ 3.73
ATRAID-201ENST00000380171 TRAK1Q9UPV9 953 aa38.33■■■■□ 3.73
ATRAID-201ENST00000380171 PLEKHH1Q9ULM0 1364 aa38.32■■■■□ 3.73
ATRAID-201ENST00000380171 DCCP43146 1447 aa38.32■■■■□ 3.73
ATRAID-201ENST00000380171 ROCK2O75116 1388 aaKnown RBP38.31■■■■□ 3.72
ATRAID-201ENST00000380171 RALGAPBQ86X10 1494 aa38.31■■■■□ 3.72
ATRAID-201ENST00000380171 WAPLQ7Z5K2 1190 aa38.31■■■■□ 3.72
ATRAID-201ENST00000380171 C19orf44Q9H6X5 657 aa38.31■■■■□ 3.72
ATRAID-201ENST00000380171 TIMELESSQ9UNS1 1208 aa38.31■■■■□ 3.72
ATRAID-201ENST00000380171 SIRT1Q96EB6 747 aa38.28■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms