RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
PRNP-201ENST00000379440 NEURL4Q96JN8 1562 aa20.15■□□□□ 0.82
PRNP-201ENST00000379440 RIMBP3CA6NJZ7 1639 aa20.15■□□□□ 0.82
PRNP-201ENST00000379440 RIMBP3BA6NNM3 1639 aa20.15■□□□□ 0.82
PRNP-201ENST00000379440 RIMBP3Q9UFD9 1639 aa20.15■□□□□ 0.82
PRNP-201ENST00000379440 MAP3K4Q9Y6R4 1608 aa20.15■□□□□ 0.82
PRNP-201ENST00000379440 MROH2AA6NES4 1674 aa20.15■□□□□ 0.82
PRNP-201ENST00000379440 KTN1Q86UP2 1357 aaKnown RBP20.14■□□□□ 0.81
PRNP-201ENST00000379440 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
PRNP-201ENST00000379440 DIP2CQ9Y2E4 1556 aa20.13■□□□□ 0.81
PRNP-201ENST00000379440 PARD3Q8TEW0 1356 aa20.12■□□□□ 0.81
PRNP-201ENST00000379440 ABCC3O15438 1527 aa20.12■□□□□ 0.81
PRNP-201ENST00000379440 IRX6P78412 446 aaPredicted RBP20.12■□□□□ 0.81
PRNP-201ENST00000379440 FAM69CQ0P6D2 419 aa20.12■□□□□ 0.81
PRNP-201ENST00000379440 BRD4O60885 1362 aaPredicted RBP20.12■□□□□ 0.81
PRNP-201ENST00000379440 RICTORQ6R327 1708 aa20.12■□□□□ 0.81
PRNP-201ENST00000379440 MYOM2P54296 1465 aa20.11■□□□□ 0.81
PRNP-201ENST00000379440 YEATS2Q9ULM3 1422 aa20.11■□□□□ 0.81
PRNP-201ENST00000379440 NOS1P29475 1434 aa20.09■□□□□ 0.81
PRNP-201ENST00000379440 KIAA1210Q9ULL0 1709 aa20.09■□□□□ 0.81
PRNP-201ENST00000379440 IFT172Q9UG01 1749 aa20.08■□□□□ 0.81
PRNP-201ENST00000379440 ADGRB3O60242 1522 aa20.08■□□□□ 0.81
PRNP-201ENST00000379440 GLI2P10070 1586 aa20.08■□□□□ 0.8
PRNP-201ENST00000379440 NLRP13Q86W25 1043 aa20.08■□□□□ 0.8
PRNP-201ENST00000379440 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
PRNP-201ENST00000379440 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
PRNP-201ENST00000379440 CAMSAP1Q5T5Y3 1602 aa20.06■□□□□ 0.8
PRNP-201ENST00000379440 NRXN1Q9ULB1 1477 aa20.05■□□□□ 0.8
PRNP-201ENST00000379440 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
PRNP-201ENST00000379440 CDCA8Q53HL2 280 aa20.03■□□□□ 0.8
PRNP-201ENST00000379440 DIP2BQ9P265 1576 aa20.02■□□□□ 0.8
PRNP-201ENST00000379440 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
PRNP-201ENST00000379440 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
PRNP-201ENST00000379440 TSPOAP1O95153 1857 aa20■□□□□ 0.79
PRNP-201ENST00000379440 PPLO60437 1756 aa19.99■□□□□ 0.79
PRNP-201ENST00000379440 SYNMO15061 1565 aa19.99■□□□□ 0.79
PRNP-201ENST00000379440 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
PRNP-201ENST00000379440 C14orf93Q9H972 538 aaKnown RBP19.99■□□□□ 0.79
PRNP-201ENST00000379440 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
PRNP-201ENST00000379440 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
PRNP-201ENST00000379440 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
PRNP-201ENST00000379440 IDI1Q13907 227 aa19.97■□□□□ 0.79
PRNP-201ENST00000379440 ERVK-7P63135 1459 aa19.97■□□□□ 0.79
PRNP-201ENST00000379440 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
PRNP-201ENST00000379440 AMER1Q5JTC6 1135 aaPredicted RBP19.97■□□□□ 0.79
PRNP-201ENST00000379440 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
PRNP-201ENST00000379440 ARHGAP31Q2M1Z3 1444 aa19.96■□□□□ 0.79
PRNP-201ENST00000379440 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
PRNP-201ENST00000379440 MYOM1P52179 1685 aa19.95■□□□□ 0.78
PRNP-201ENST00000379440 PIK3C2BO00750 1634 aa19.95■□□□□ 0.78
PRNP-201ENST00000379440 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
PRNP-201ENST00000379440 EIF5BO60841 1220 aaKnown RBP19.94■□□□□ 0.78
PRNP-201ENST00000379440 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
PRNP-201ENST00000379440 ZMYM4Q5VZL5 1548 aa19.93■□□□□ 0.78
PRNP-201ENST00000379440 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
PRNP-201ENST00000379440 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
PRNP-201ENST00000379440 ZC3H13Q5T200 1668 aaKnown RBP19.93■□□□□ 0.78
PRNP-201ENST00000379440 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
PRNP-201ENST00000379440 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
PRNP-201ENST00000379440 FBXO31Q5XUX0 539 aaPredicted RBP19.91■□□□□ 0.78
PRNP-201ENST00000379440 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
PRNP-201ENST00000379440 VGFO15240 615 aaPredicted RBP19.9■□□□□ 0.78
PRNP-201ENST00000379440 SLC52A1Q9NWF4 448 aa19.9■□□□□ 0.78
PRNP-201ENST00000379440 NEXMIFQ5QGS0 1516 aa19.9■□□□□ 0.78
PRNP-201ENST00000379440 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
PRNP-201ENST00000379440 MYO3AQ8NEV4 1616 aa19.9■□□□□ 0.78
PRNP-201ENST00000379440 CARD14Q9BXL6 1004 aa19.88■□□□□ 0.77
PRNP-201ENST00000379440 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
PRNP-201ENST00000379440 ERICH6BQ5W0A0 696 aa19.87■□□□□ 0.77
PRNP-201ENST00000379440 PREX1Q8TCU6 1659 aa19.86■□□□□ 0.77
PRNP-201ENST00000379440 ANO8Q9HCE9 1232 aaPredicted RBP19.86■□□□□ 0.77
PRNP-201ENST00000379440 PPP4R2Q9NY27 417 aa19.85■□□□□ 0.77
PRNP-201ENST00000379440 ADAMTS8Q9UP79 889 aa19.85■□□□□ 0.77
PRNP-201ENST00000379440 MLECQ14165 292 aa19.84■□□□□ 0.77
PRNP-201ENST00000379440 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.77
PRNP-201ENST00000379440 QRICH2Q9H0J4 1663 aa19.83■□□□□ 0.77
PRNP-201ENST00000379440 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.77
PRNP-201ENST00000379440 BLMP54132 1417 aaPredicted RBP19.83■□□□□ 0.76
PRNP-201ENST00000379440 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
PRNP-201ENST00000379440 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
PRNP-201ENST00000379440 TMEM131LA2VDJ0 1609 aa19.81■□□□□ 0.76
PRNP-201ENST00000379440 CDCA7LQ96GN5 454 aa19.81■□□□□ 0.76
PRNP-201ENST00000379440 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
PRNP-201ENST00000379440 SAFB2Q14151 953 aaKnown RBP eCLIP19.79■□□□□ 0.76
PRNP-201ENST00000379440 STK26Q9P289 416 aa19.79■□□□□ 0.76
PRNP-201ENST00000379440 INSRP06213 1382 aa19.79■□□□□ 0.76
PRNP-201ENST00000379440 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
PRNP-201ENST00000379440 ZFYVE9O95405 1425 aa19.78■□□□□ 0.76
PRNP-201ENST00000379440 REREQ9P2R6 1566 aa19.78■□□□□ 0.76
PRNP-201ENST00000379440 AGLP35573 1532 aa19.78■□□□□ 0.76
PRNP-201ENST00000379440 UBE2Q2Q8WVN8 375 aa19.78■□□□□ 0.76
PRNP-201ENST00000379440 KIF13AQ9H1H9 1805 aa19.78■□□□□ 0.76
PRNP-201ENST00000379440 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
PRNP-201ENST00000379440 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
PRNP-201ENST00000379440 CLTCQ00610 1675 aaKnown RBP19.76■□□□□ 0.75
PRNP-201ENST00000379440 ARHGEF28Q8N1W1 1705 aaKnown RBP19.76■□□□□ 0.75
PRNP-201ENST00000379440 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
PRNP-201ENST00000379440 NSD3Q9BZ95 1437 aa19.75■□□□□ 0.75
PRNP-201ENST00000379440 CABP2Q9NPB3 220 aa19.74■□□□□ 0.75
PRNP-201ENST00000379440 EVC2Q86UK5 1308 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms