RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.37■■■□□ 2.29
C5orf56-203ENST00000378953 RAB3GAP2Q9H2M9 1393 aa29.36■■■□□ 2.29
C5orf56-203ENST00000378953 CPS1P31327 1500 aa29.35■■■□□ 2.29
C5orf56-203ENST00000378953 PPP1R15AO75807 674 aaPredicted RBP29.35■■■□□ 2.29
C5orf56-203ENST00000378953 MYO5BQ9ULV0 1848 aa29.34■■■□□ 2.29
C5orf56-203ENST00000378953 PLEKHG1Q9ULL1 1385 aa29.32■■■□□ 2.28
C5orf56-203ENST00000378953 FOXD1Q16676 465 aa29.32■■■□□ 2.28
C5orf56-203ENST00000378953 BCANQ96GW7 911 aa29.31■■■□□ 2.28
C5orf56-203ENST00000378953 SLC26A8Q96RN1 970 aa29.31■■■□□ 2.28
C5orf56-203ENST00000378953 CLTCL1P53675 1640 aa29.31■■■□□ 2.28
C5orf56-203ENST00000378953 NUTM2DQ5VT03 806 aaPredicted RBP29.29■■■□□ 2.28
C5orf56-203ENST00000378953 ZNF326Q5BKZ1 582 aaKnown RBP29.28■■■□□ 2.28
C5orf56-203ENST00000378953 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
C5orf56-203ENST00000378953 HRCP23327 699 aa29.25■■■□□ 2.27
C5orf56-203ENST00000378953 STRCP1A6NGW2 1772 aa29.21■■■□□ 2.27
C5orf56-203ENST00000378953 KCNA6P17658 529 aa29.21■■■□□ 2.27
C5orf56-203ENST00000378953 TBX22Q9Y458 520 aa29.21■■■□□ 2.27
C5orf56-203ENST00000378953 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.27
C5orf56-203ENST00000378953 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
C5orf56-203ENST00000378953 CCDC144AA2RUR9 1427 aa29.19■■■□□ 2.26
C5orf56-203ENST00000378953 ADAMTS13Q76LX8 1427 aa29.17■■■□□ 2.26
C5orf56-203ENST00000378953 KIF1BO60333 1816 aa29.17■■■□□ 2.26
C5orf56-203ENST00000378953 RPGRIP1LQ68CZ1 1315 aa29.14■■■□□ 2.25
C5orf56-203ENST00000378953 NEXMIFQ5QGS0 1516 aa29.14■■■□□ 2.25
C5orf56-203ENST00000378953 TOM1O60784 492 aa29.11■■■□□ 2.25
C5orf56-203ENST00000378953 DIP2AQ14689 1571 aa29.1■■■□□ 2.25
C5orf56-203ENST00000378953 VGFO15240 615 aaPredicted RBP29.1■■■□□ 2.25
C5orf56-203ENST00000378953 PROSER2Q86WR7 435 aaPredicted RBP29.09■■■□□ 2.25
C5orf56-203ENST00000378953 PIK3R4Q99570 1358 aa29.09■■■□□ 2.25
C5orf56-203ENST00000378953 NWD1Q149M9 1564 aa29.09■■■□□ 2.25
C5orf56-203ENST00000378953 SPATA31E1Q6ZUB1 1445 aa29.08■■■□□ 2.25
C5orf56-203ENST00000378953 NKTRP30414 1462 aaKnown RBP29.08■■■□□ 2.25
C5orf56-203ENST00000378953 SETBP1Q9Y6X0 1596 aa29.08■■■□□ 2.25
C5orf56-203ENST00000378953 TMEM94Q12767 1356 aa29.07■■■□□ 2.24
C5orf56-203ENST00000378953 RGL3Q3MIN7 710 aa29.05■■■□□ 2.24
C5orf56-203ENST00000378953 NRXN3Q9Y4C0 1643 aa29.04■■■□□ 2.24
C5orf56-203ENST00000378953 ANKRD30BQ9BXX2 1392 aa29.02■■■□□ 2.24
C5orf56-203ENST00000378953 CHD2O14647 1828 aaKnown RBP29.02■■■□□ 2.24
C5orf56-203ENST00000378953 RBM33Q96EV2 1170 aaKnown RBP29.01■■■□□ 2.23
C5orf56-203ENST00000378953 PIP4K2BP78356 416 aa29■■■□□ 2.23
C5orf56-203ENST00000378953 AMOTL2Q9Y2J4 779 aa29■■■□□ 2.23
C5orf56-203ENST00000378953 PTPRUQ92729 1446 aa28.99■■■□□ 2.23
C5orf56-203ENST00000378953 METP08581 1390 aa28.99■■■□□ 2.23
C5orf56-203ENST00000378953 SCAF1Q9H7N4 1312 aaKnown RBP28.97■■■□□ 2.23
C5orf56-203ENST00000378953 ALKQ9UM73 1620 aa28.97■■■□□ 2.23
C5orf56-203ENST00000378953 XIRP1Q702N8 1843 aaKnown RBP28.97■■■□□ 2.23
C5orf56-203ENST00000378953 PPLO60437 1756 aa28.96■■■□□ 2.23
C5orf56-203ENST00000378953 ADGRF5Q8IZF2 1346 aa28.94■■■□□ 2.22
C5orf56-203ENST00000378953 NCOA3Q9Y6Q9 1424 aa28.92■■■□□ 2.22
C5orf56-203ENST00000378953 MSH6P52701 1360 aa28.89■■■□□ 2.22
C5orf56-203ENST00000378953 TRIM26Q12899 539 aaPredicted RBP28.89■■■□□ 2.22
C5orf56-203ENST00000378953 XRN1Q8IZH2 1706 aaKnown RBP28.87■■■□□ 2.21
C5orf56-203ENST00000378953 C14orf37Q86TY3 774 aa28.87■■■□□ 2.21
C5orf56-203ENST00000378953 IFT172Q9UG01 1749 aa28.86■■■□□ 2.21
C5orf56-203ENST00000378953 HSPA1LP34931 641 aa28.84■■■□□ 2.21
C5orf56-203ENST00000378953 C19orf44Q9H6X5 657 aa28.83■■■□□ 2.21
C5orf56-203ENST00000378953 PIK3C2GO75747 1445 aa28.83■■■□□ 2.21
C5orf56-203ENST00000378953 SETD1AO15047 1707 aaKnown RBP28.83■■■□□ 2.21
C5orf56-203ENST00000378953 MYOM2P54296 1465 aa28.8■■■□□ 2.2
C5orf56-203ENST00000378953 FAM135BQ49AJ0 1406 aa28.79■■■□□ 2.2
C5orf56-203ENST00000378953 SLAIN2Q9P270 581 aa28.79■■■□□ 2.2
C5orf56-203ENST00000378953 NRXN1Q9ULB1 1477 aa28.78■■■□□ 2.2
C5orf56-203ENST00000378953 CADPS2Q86UW7 1296 aa28.77■■■□□ 2.2
C5orf56-203ENST00000378953 PTCH1Q13635 1447 aa28.77■■■□□ 2.2
C5orf56-203ENST00000378953 PRAG1Q86YV5 1406 aa28.77■■■□□ 2.2
C5orf56-203ENST00000378953 ATF3P18847 181 aa28.76■■■□□ 2.19
C5orf56-203ENST00000378953 C14orf93Q9H972 538 aaKnown RBP28.76■■■□□ 2.19
C5orf56-203ENST00000378953 ROBO2Q9HCK4 1378 aa28.75■■■□□ 2.19
C5orf56-203ENST00000378953 DCAF11Q8TEB1 546 aa28.74■■■□□ 2.19
C5orf56-203ENST00000378953 STAC3Q96MF2 364 aa28.74■■■□□ 2.19
C5orf56-203ENST00000378953 TMEM132EQ6IEE7 984 aa28.73■■■□□ 2.19
C5orf56-203ENST00000378953 CFAP70Q5T0N1 1121 aa28.72■■■□□ 2.19
C5orf56-203ENST00000378953 KDM2AQ9Y2K7 1162 aa28.72■■■□□ 2.19
C5orf56-203ENST00000378953 LRPPRCP42704 1394 aaKnown RBP28.72■■■□□ 2.19
C5orf56-203ENST00000378953 DHX57Q6P158 1386 aaKnown RBP28.72■■■□□ 2.19
C5orf56-203ENST00000378953 DCCP43146 1447 aa28.71■■■□□ 2.19
C5orf56-203ENST00000378953 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.71■■■□□ 2.19
C5orf56-203ENST00000378953 ADGRL3Q9HAR2 1447 aa28.7■■■□□ 2.19
C5orf56-203ENST00000378953 STK26Q9P289 416 aa28.7■■■□□ 2.18
C5orf56-203ENST00000378953 ABCC11Q96J66 1382 aa28.69■■■□□ 2.18
C5orf56-203ENST00000378953 ASXL1Q8IXJ9 1541 aa28.69■■■□□ 2.18
C5orf56-203ENST00000378953 TECPR2O15040 1411 aa28.67■■■□□ 2.18
C5orf56-203ENST00000378953 YTHDC2Q9H6S0 1430 aaKnown RBP28.66■■■□□ 2.18
C5orf56-203ENST00000378953 DISP3Q9P2K9 1392 aa28.65■■■□□ 2.18
C5orf56-203ENST00000378953 ROBO1Q9Y6N7 1651 aa28.65■■■□□ 2.18
C5orf56-203ENST00000378953 LAMC1P11047 1609 aa28.63■■■□□ 2.17
C5orf56-203ENST00000378953 SIRT1Q96EB6 747 aa28.61■■■□□ 2.17
C5orf56-203ENST00000378953 WAPLQ7Z5K2 1190 aa28.6■■■□□ 2.17
C5orf56-203ENST00000378953 NALCNQ8IZF0 1738 aa28.6■■■□□ 2.17
C5orf56-203ENST00000378953 MST1RQ04912 1400 aa28.6■■■□□ 2.17
C5orf56-203ENST00000378953 SIN3AQ96ST3 1273 aa28.59■■■□□ 2.17
C5orf56-203ENST00000378953 BRINP3Q76B58 766 aa28.57■■■□□ 2.16
C5orf56-203ENST00000378953 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
C5orf56-203ENST00000378953 KNDC1Q76NI1 1749 aa28.55■■■□□ 2.16
C5orf56-203ENST00000378953 ADGRB1O14514 1584 aa28.54■■■□□ 2.16
C5orf56-203ENST00000378953 NEUROD1Q13562 356 aa28.53■■■□□ 2.16
C5orf56-203ENST00000378953 L3MBTL2Q969R5 705 aa28.51■■■□□ 2.15
C5orf56-203ENST00000378953 C1orf167Q5SNV9 1468 aa28.5■■■□□ 2.15
C5orf56-203ENST00000378953 PRAM1Q96QH2 718 aa28.49■■■□□ 2.15
C5orf56-203ENST00000378953 TRAK1Q9UPV9 953 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms