RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
PCDHA1-201ENST00000378133 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
PCDHA1-201ENST00000378133 ADAMTS8Q9UP79 889 aa21.84■■□□□ 1.09
PCDHA1-201ENST00000378133 ABCC1P33527 1531 aa21.84■■□□□ 1.09
PCDHA1-201ENST00000378133 KNSTRNQ9Y448 316 aa21.81■■□□□ 1.08
PCDHA1-201ENST00000378133 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
PCDHA1-201ENST00000378133 INSRP06213 1382 aa21.81■■□□□ 1.08
PCDHA1-201ENST00000378133 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
PCDHA1-201ENST00000378133 DDRGK1Q96HY6 314 aa21.79■■□□□ 1.08
PCDHA1-201ENST00000378133 FANCAO15360 1455 aa21.78■■□□□ 1.08
PCDHA1-201ENST00000378133 PPP2R1AP30153 589 aa21.78■■□□□ 1.08
PCDHA1-201ENST00000378133 CRBNQ96SW2 442 aa21.78■■□□□ 1.08
PCDHA1-201ENST00000378133 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.08
PCDHA1-201ENST00000378133 ZMYM4Q5VZL5 1548 aa21.77■■□□□ 1.07
PCDHA1-201ENST00000378133 AMER1Q5JTC6 1135 aaPredicted RBP21.75■■□□□ 1.07
PCDHA1-201ENST00000378133 WDR43Q15061 677 aaKnown RBP eCLIP21.74■■□□□ 1.07
PCDHA1-201ENST00000378133 MADDQ8WXG6 1647 aa21.73■■□□□ 1.07
PCDHA1-201ENST00000378133 GSE1Q14687 1217 aa21.73■■□□□ 1.07
PCDHA1-201ENST00000378133 CDCA8Q53HL2 280 aa21.72■■□□□ 1.07
PCDHA1-201ENST00000378133 C20orf194Q5TEA3 1177 aa21.72■■□□□ 1.07
PCDHA1-201ENST00000378133 SKAP1Q86WV1 359 aa21.71■■□□□ 1.07
PCDHA1-201ENST00000378133 CD109Q6YHK3 1445 aa21.71■■□□□ 1.07
PCDHA1-201ENST00000378133 PLEKHH1Q9ULM0 1364 aa21.7■■□□□ 1.06
PCDHA1-201ENST00000378133 IQGAP1P46940 1657 aa21.7■■□□□ 1.06
PCDHA1-201ENST00000378133 SCAF11Q99590 1463 aaKnown RBP21.7■■□□□ 1.06
PCDHA1-201ENST00000378133 BRPF3Q9ULD4 1205 aa21.69■■□□□ 1.06
PCDHA1-201ENST00000378133 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
PCDHA1-201ENST00000378133 TRPM2O94759 1503 aa21.69■■□□□ 1.06
PCDHA1-201ENST00000378133 NFKBIBQ15653 356 aa21.69■■□□□ 1.06
PCDHA1-201ENST00000378133 DUSP27Q5VZP5 1158 aa21.68■■□□□ 1.06
PCDHA1-201ENST00000378133 STAC3Q96MF2 364 aa21.68■■□□□ 1.06
PCDHA1-201ENST00000378133 PTPRTO14522 1441 aa21.68■■□□□ 1.06
PCDHA1-201ENST00000378133 RTEL1-TNFRSF6BF6WH68 1400 aa21.67■■□□□ 1.06
PCDHA1-201ENST00000378133 EIF5BO60841 1220 aaKnown RBP21.67■■□□□ 1.06
PCDHA1-201ENST00000378133 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
PCDHA1-201ENST00000378133 SCAPERQ9BY12 1400 aa21.66■■□□□ 1.06
PCDHA1-201ENST00000378133 CLTCL1P53675 1640 aa21.66■■□□□ 1.06
PCDHA1-201ENST00000378133 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
PCDHA1-201ENST00000378133 KIF3BO15066 747 aa21.65■■□□□ 1.06
PCDHA1-201ENST00000378133 SLC4A3P48751 1232 aa21.65■■□□□ 1.06
PCDHA1-201ENST00000378133 GOLGA2Q08379 1002 aa21.65■■□□□ 1.06
PCDHA1-201ENST00000378133 CEP152O94986 1710 aa21.65■■□□□ 1.06
PCDHA1-201ENST00000378133 ZFYVE16Q7Z3T8 1539 aa21.64■■□□□ 1.06
PCDHA1-201ENST00000378133 ZNF521Q96K83 1311 aa21.63■■□□□ 1.05
PCDHA1-201ENST00000378133 ASXL1Q8IXJ9 1541 aa21.63■■□□□ 1.05
PCDHA1-201ENST00000378133 CCDC146Q8IYE0 955 aa21.63■■□□□ 1.05
PCDHA1-201ENST00000378133 SYNMO15061 1565 aa21.63■■□□□ 1.05
PCDHA1-201ENST00000378133 MAP3K4Q9Y6R4 1608 aa21.63■■□□□ 1.05
PCDHA1-201ENST00000378133 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
PCDHA1-201ENST00000378133 CFAP74Q9C0B2 1584 aa21.62■■□□□ 1.05
PCDHA1-201ENST00000378133 KANK1Q14678 1352 aa21.62■■□□□ 1.05
PCDHA1-201ENST00000378133 FRAT1Q92837 279 aaPredicted RBP21.61■■□□□ 1.05
PCDHA1-201ENST00000378133 PKNOX2Q96KN3 472 aa21.61■■□□□ 1.05
PCDHA1-201ENST00000378133 INO80Q9ULG1 1556 aaPredicted RBP21.61■■□□□ 1.05
PCDHA1-201ENST00000378133 EIF3AQ14152 1382 aaKnown RBP21.6■■□□□ 1.05
PCDHA1-201ENST00000378133 GLI2P10070 1586 aa21.6■■□□□ 1.05
PCDHA1-201ENST00000378133 DIP2BQ9P265 1576 aa21.59■■□□□ 1.05
PCDHA1-201ENST00000378133 PIK3C2GO75747 1445 aa21.59■■□□□ 1.05
PCDHA1-201ENST00000378133 SLFN5Q08AF3 891 aa21.58■■□□□ 1.05
PCDHA1-201ENST00000378133 ATP7AQ04656 1500 aa21.58■■□□□ 1.05
PCDHA1-201ENST00000378133 TET3O43151 1660 aa21.58■■□□□ 1.05
PCDHA1-201ENST00000378133 DEPDC5O75140 1603 aa21.58■■□□□ 1.04
PCDHA1-201ENST00000378133 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.04
PCDHA1-201ENST00000378133 KDM2BQ8NHM5 1336 aa21.57■■□□□ 1.04
PCDHA1-201ENST00000378133 APAF1O14727 1248 aa21.57■■□□□ 1.04
PCDHA1-201ENST00000378133 NPC1L1Q9UHC9 1359 aa21.57■■□□□ 1.04
PCDHA1-201ENST00000378133 MYOM1P52179 1685 aa21.57■■□□□ 1.04
PCDHA1-201ENST00000378133 SPINK5Q9NQ38 1064 aaPredicted RBP21.56■■□□□ 1.04
PCDHA1-201ENST00000378133 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
PCDHA1-201ENST00000378133 CARD14Q9BXL6 1004 aa21.55■■□□□ 1.04
PCDHA1-201ENST00000378133 UGGT1Q9NYU2 1555 aa21.54■■□□□ 1.04
PCDHA1-201ENST00000378133 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
PCDHA1-201ENST00000378133 NEO1Q92859 1461 aa21.54■■□□□ 1.04
PCDHA1-201ENST00000378133 POGZQ7Z3K3 1410 aa21.53■■□□□ 1.04
PCDHA1-201ENST00000378133 ZNF518AQ6AHZ1 1483 aa21.53■■□□□ 1.04
PCDHA1-201ENST00000378133 FAM69CQ0P6D2 419 aa21.53■■□□□ 1.04
PCDHA1-201ENST00000378133 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
PCDHA1-201ENST00000378133 TRMT2AQ8IZ69 625 aaKnown RBP21.53■■□□□ 1.04
PCDHA1-201ENST00000378133 KIDINS220Q9ULH0 1771 aa21.52■■□□□ 1.04
PCDHA1-201ENST00000378133 KDM5AP29375 1690 aaKnown RBP21.52■■□□□ 1.04
PCDHA1-201ENST00000378133 VWDEQ8N2E2 1590 aa21.52■■□□□ 1.04
PCDHA1-201ENST00000378133 ERVK-7P63135 1459 aa21.51■■□□□ 1.03
PCDHA1-201ENST00000378133 KIAA1210Q9ULL0 1709 aa21.5■■□□□ 1.03
PCDHA1-201ENST00000378133 SLC24A1O60721 1099 aa21.5■■□□□ 1.03
PCDHA1-201ENST00000378133 C8orf34Q49A92 452 aa21.49■■□□□ 1.03
PCDHA1-201ENST00000378133 BCAR3O75815 825 aa21.49■■□□□ 1.03
PCDHA1-201ENST00000378133 FRAT2O75474 233 aaPredicted RBP21.48■■□□□ 1.03
PCDHA1-201ENST00000378133 PPRC1Q5VV67 1664 aaKnown RBP21.47■■□□□ 1.03
PCDHA1-201ENST00000378133 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
PCDHA1-201ENST00000378133 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
PCDHA1-201ENST00000378133 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
PCDHA1-201ENST00000378133 TSPOAP1O95153 1857 aa21.47■■□□□ 1.03
PCDHA1-201ENST00000378133 MYOM2P54296 1465 aa21.46■■□□□ 1.03
PCDHA1-201ENST00000378133 E9PSI1 815 aa21.45■■□□□ 1.02
PCDHA1-201ENST00000378133 RAPGEF3O95398 923 aa21.45■■□□□ 1.02
PCDHA1-201ENST00000378133 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.02
PCDHA1-201ENST00000378133 MROH1Q8NDA8 1641 aa21.45■■□□□ 1.02
PCDHA1-201ENST00000378133 HECW2Q9P2P5 1572 aa21.45■■□□□ 1.02
PCDHA1-201ENST00000378133 KIF13AQ9H1H9 1805 aa21.44■■□□□ 1.02
PCDHA1-201ENST00000378133 KIF1BO60333 1816 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms