RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 DMRT2Q9Y5R5 561 aa24.56■■□□□ 1.52
HLA-F-218ENST00000376861 SLIT1O75093 1534 aa24.56■■□□□ 1.52
HLA-F-218ENST00000376861 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
HLA-F-218ENST00000376861 NEUROD1Q13562 356 aa24.56■■□□□ 1.52
HLA-F-218ENST00000376861 ZEB1P37275 1124 aaPredicted RBP24.55■■□□□ 1.52
HLA-F-218ENST00000376861 SCAF11Q99590 1463 aaKnown RBP24.54■■□□□ 1.52
HLA-F-218ENST00000376861 ARHGAP23Q9P227 1491 aa24.54■■□□□ 1.52
HLA-F-218ENST00000376861 NUTM2DQ5VT03 806 aaPredicted RBP24.53■■□□□ 1.52
HLA-F-218ENST00000376861 RPGRIP1LQ68CZ1 1315 aa24.53■■□□□ 1.52
HLA-F-218ENST00000376861 STRCQ7RTU9 1775 aa24.51■■□□□ 1.51
HLA-F-218ENST00000376861 VGFO15240 615 aaPredicted RBP24.51■■□□□ 1.51
HLA-F-218ENST00000376861 LTKP29376 864 aa24.51■■□□□ 1.51
HLA-F-218ENST00000376861 SIN3AQ96ST3 1273 aa24.51■■□□□ 1.51
HLA-F-218ENST00000376861 NEURL4Q96JN8 1562 aa24.49■■□□□ 1.51
HLA-F-218ENST00000376861 SPATA31E1Q6ZUB1 1445 aa24.49■■□□□ 1.51
HLA-F-218ENST00000376861 ZFYVE9O95405 1425 aa24.48■■□□□ 1.51
HLA-F-218ENST00000376861 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
HLA-F-218ENST00000376861 NPHP4O75161 1426 aaPredicted RBP24.47■■□□□ 1.51
HLA-F-218ENST00000376861 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.5
HLA-F-218ENST00000376861 IQGAP1P46940 1657 aa24.45■■□□□ 1.5
HLA-F-218ENST00000376861 PPLO60437 1756 aa24.44■■□□□ 1.5
HLA-F-218ENST00000376861 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
HLA-F-218ENST00000376861 MED14O60244 1454 aa24.43■■□□□ 1.5
HLA-F-218ENST00000376861 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
HLA-F-218ENST00000376861 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
HLA-F-218ENST00000376861 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
HLA-F-218ENST00000376861 STAC3Q96MF2 364 aa24.4■■□□□ 1.5
HLA-F-218ENST00000376861 IFT172Q9UG01 1749 aa24.39■■□□□ 1.5
HLA-F-218ENST00000376861 SLC26A8Q96RN1 970 aa24.37■■□□□ 1.49
HLA-F-218ENST00000376861 ADGRF5Q8IZF2 1346 aa24.34■■□□□ 1.49
HLA-F-218ENST00000376861 L3MBTL2Q969R5 705 aa24.33■■□□□ 1.49
HLA-F-218ENST00000376861 MYOM2P54296 1465 aa24.33■■□□□ 1.48
HLA-F-218ENST00000376861 DIP2AQ14689 1571 aa24.3■■□□□ 1.48
HLA-F-218ENST00000376861 TBX22Q9Y458 520 aa24.3■■□□□ 1.48
HLA-F-218ENST00000376861 SETBP1Q9Y6X0 1596 aa24.3■■□□□ 1.48
HLA-F-218ENST00000376861 TIMELESSQ9UNS1 1208 aa24.29■■□□□ 1.48
HLA-F-218ENST00000376861 PIK3C2GO75747 1445 aa24.26■■□□□ 1.47
HLA-F-218ENST00000376861 ADAMTS13Q76LX8 1427 aa24.26■■□□□ 1.47
HLA-F-218ENST00000376861 ALKQ9UM73 1620 aa24.25■■□□□ 1.47
HLA-F-218ENST00000376861 NRXN3Q9Y4C0 1643 aa24.25■■□□□ 1.47
HLA-F-218ENST00000376861 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
HLA-F-218ENST00000376861 LAMC1P11047 1609 aa24.23■■□□□ 1.47
HLA-F-218ENST00000376861 NRXN1Q9ULB1 1477 aa24.22■■□□□ 1.47
HLA-F-218ENST00000376861 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
HLA-F-218ENST00000376861 CFAP70Q5T0N1 1121 aa24.21■■□□□ 1.47
HLA-F-218ENST00000376861 C14orf93Q9H972 538 aaKnown RBP24.21■■□□□ 1.47
HLA-F-218ENST00000376861 KCNA6P17658 529 aa24.2■■□□□ 1.46
HLA-F-218ENST00000376861 PRAG1Q86YV5 1406 aa24.18■■□□□ 1.46
HLA-F-218ENST00000376861 METP08581 1390 aa24.18■■□□□ 1.46
HLA-F-218ENST00000376861 AMOTL2Q9Y2J4 779 aa24.17■■□□□ 1.46
HLA-F-218ENST00000376861 CHD2O14647 1828 aaKnown RBP24.17■■□□□ 1.46
HLA-F-218ENST00000376861 TMEM132EQ6IEE7 984 aa24.16■■□□□ 1.46
HLA-F-218ENST00000376861 STK26Q9P289 416 aa24.15■■□□□ 1.46
HLA-F-218ENST00000376861 SETD1AO15047 1707 aaKnown RBP24.15■■□□□ 1.46
HLA-F-218ENST00000376861 CPS1P31327 1500 aa24.14■■□□□ 1.46
HLA-F-218ENST00000376861 PROSER2Q86WR7 435 aaPredicted RBP24.14■■□□□ 1.45
HLA-F-218ENST00000376861 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
HLA-F-218ENST00000376861 NWD1Q149M9 1564 aa24.11■■□□□ 1.45
HLA-F-218ENST00000376861 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
HLA-F-218ENST00000376861 STRCP1A6NGW2 1772 aa24.1■■□□□ 1.45
HLA-F-218ENST00000376861 C14orf37Q86TY3 774 aa24.1■■□□□ 1.45
HLA-F-218ENST00000376861 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
HLA-F-218ENST00000376861 PTPRUQ92729 1446 aa24.1■■□□□ 1.45
HLA-F-218ENST00000376861 LTBP4Q8N2S1 1624 aa24.08■■□□□ 1.45
HLA-F-218ENST00000376861 YTHDC2Q9H6S0 1430 aaKnown RBP24.08■■□□□ 1.45
HLA-F-218ENST00000376861 NBPF8Q3BBV2 869 aa24.08■■□□□ 1.45
HLA-F-218ENST00000376861 LRPPRCP42704 1394 aaKnown RBP24.07■■□□□ 1.44
HLA-F-218ENST00000376861 TRPM1Q7Z4N2 1603 aa24.07■■□□□ 1.44
HLA-F-218ENST00000376861 NBPF1Q3BBV0 1214 aa24.06■■□□□ 1.44
HLA-F-218ENST00000376861 XRN1Q8IZH2 1706 aaKnown RBP24.06■■□□□ 1.44
HLA-F-218ENST00000376861 TRAK1Q9UPV9 953 aa24.05■■□□□ 1.44
HLA-F-218ENST00000376861 ASXL1Q8IXJ9 1541 aa24.05■■□□□ 1.44
HLA-F-218ENST00000376861 CERKQ8TCT0 537 aa24.04■■□□□ 1.44
HLA-F-218ENST00000376861 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
HLA-F-218ENST00000376861 RBM33Q96EV2 1170 aaKnown RBP24.03■■□□□ 1.44
HLA-F-218ENST00000376861 POGKQ9P215 609 aa24.03■■□□□ 1.44
HLA-F-218ENST00000376861 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
HLA-F-218ENST00000376861 LRRC7Q96NW7 1537 aa24.02■■□□□ 1.44
HLA-F-218ENST00000376861 TMEM94Q12767 1356 aa24.02■■□□□ 1.44
HLA-F-218ENST00000376861 KNDC1Q76NI1 1749 aa24.01■■□□□ 1.43
HLA-F-218ENST00000376861 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
HLA-F-218ENST00000376861 CARD11Q9BXL7 1154 aa24.01■■□□□ 1.43
HLA-F-218ENST00000376861 RALGAPBQ86X10 1494 aa23.99■■□□□ 1.43
HLA-F-218ENST00000376861 ROBO2Q9HCK4 1378 aa23.99■■□□□ 1.43
HLA-F-218ENST00000376861 TECPR2O15040 1411 aa23.98■■□□□ 1.43
HLA-F-218ENST00000376861 MSH6P52701 1360 aa23.97■■□□□ 1.43
HLA-F-218ENST00000376861 WAPLQ7Z5K2 1190 aa23.97■■□□□ 1.43
HLA-F-218ENST00000376861 SIRT1Q96EB6 747 aa23.97■■□□□ 1.43
HLA-F-218ENST00000376861 PRAM1Q96QH2 718 aa23.97■■□□□ 1.43
HLA-F-218ENST00000376861 SAFB2Q14151 953 aaKnown RBP eCLIP23.96■■□□□ 1.43
HLA-F-218ENST00000376861 NCOA3Q9Y6Q9 1424 aa23.96■■□□□ 1.43
HLA-F-218ENST00000376861 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
HLA-F-218ENST00000376861 FAM135BQ49AJ0 1406 aa23.95■■□□□ 1.42
HLA-F-218ENST00000376861 DLC1Q96QB1 1528 aa23.95■■□□□ 1.42
HLA-F-218ENST00000376861 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
HLA-F-218ENST00000376861 ATF3P18847 181 aa23.93■■□□□ 1.42
HLA-F-218ENST00000376861 C19orf44Q9H6X5 657 aa23.93■■□□□ 1.42
HLA-F-218ENST00000376861 XIRP1Q702N8 1843 aaKnown RBP23.92■■□□□ 1.42
HLA-F-218ENST00000376861 GPRASP1Q5JY77 1395 aa23.92■■□□□ 1.42
HLA-F-218ENST00000376861 ARHGEF28Q8N1W1 1705 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms