RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 RIMS2Q9UQ26 1411 aa29.23■■■□□ 2.27
DDR1-228ENST00000376575 TXNDC2Q86VQ3 553 aa29.23■■■□□ 2.27
DDR1-228ENST00000376575 EID1Q9Y6B2 187 aa29.21■■■□□ 2.27
DDR1-228ENST00000376575 NEXMIFQ5QGS0 1516 aa29.19■■■□□ 2.26
DDR1-228ENST00000376575 NPHP4O75161 1426 aaPredicted RBP29.19■■■□□ 2.26
DDR1-228ENST00000376575 HDGFP51858 240 aaKnown RBP29.17■■■□□ 2.26
DDR1-228ENST00000376575 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.17■■■□□ 2.26
DDR1-228ENST00000376575 IQGAP1P46940 1657 aa29.17■■■□□ 2.26
DDR1-228ENST00000376575 RPGRIP1LQ68CZ1 1315 aa29.16■■■□□ 2.26
DDR1-228ENST00000376575 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
DDR1-228ENST00000376575 ZNF326Q5BKZ1 582 aaKnown RBP29.12■■■□□ 2.25
DDR1-228ENST00000376575 PPLO60437 1756 aa29.11■■■□□ 2.25
DDR1-228ENST00000376575 IFT172Q9UG01 1749 aa29.09■■■□□ 2.25
DDR1-228ENST00000376575 NUTM2DQ5VT03 806 aaPredicted RBP29.07■■■□□ 2.24
DDR1-228ENST00000376575 RGL3Q3MIN7 710 aa29.06■■■□□ 2.24
DDR1-228ENST00000376575 VGFO15240 615 aaPredicted RBP29.04■■■□□ 2.24
DDR1-228ENST00000376575 PPP1R15AO75807 674 aaPredicted RBP29.04■■■□□ 2.24
DDR1-228ENST00000376575 SETBP1Q9Y6X0 1596 aa29.04■■■□□ 2.24
DDR1-228ENST00000376575 ADAMTS13Q76LX8 1427 aa29.03■■■□□ 2.24
DDR1-228ENST00000376575 NRXN3Q9Y4C0 1643 aa29.03■■■□□ 2.24
DDR1-228ENST00000376575 SIN3AQ96ST3 1273 aa28.99■■■□□ 2.23
DDR1-228ENST00000376575 TBX22Q9Y458 520 aa28.99■■■□□ 2.23
DDR1-228ENST00000376575 DIP2AQ14689 1571 aa28.98■■■□□ 2.23
DDR1-228ENST00000376575 LTBP4Q8N2S1 1624 aa28.98■■■□□ 2.23
DDR1-228ENST00000376575 MYOM2P54296 1465 aa28.97■■■□□ 2.23
DDR1-228ENST00000376575 NRXN1Q9ULB1 1477 aa28.97■■■□□ 2.23
DDR1-228ENST00000376575 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
DDR1-228ENST00000376575 SLC26A8Q96RN1 970 aa28.96■■■□□ 2.23
DDR1-228ENST00000376575 ZNF335Q9H4Z2 1342 aaPredicted RBP28.95■■■□□ 2.23
DDR1-228ENST00000376575 STAC3Q96MF2 364 aa28.95■■■□□ 2.22
DDR1-228ENST00000376575 PIK3C2GO75747 1445 aa28.93■■■□□ 2.22
DDR1-228ENST00000376575 STRCP1A6NGW2 1772 aa28.92■■■□□ 2.22
DDR1-228ENST00000376575 CLSPNQ9HAW4 1339 aa28.92■■■□□ 2.22
DDR1-228ENST00000376575 SETD1AO15047 1707 aaKnown RBP28.91■■■□□ 2.22
DDR1-228ENST00000376575 PIK3R4Q99570 1358 aa28.9■■■□□ 2.22
DDR1-228ENST00000376575 BCANQ96GW7 911 aa28.9■■■□□ 2.22
DDR1-228ENST00000376575 ALKQ9UM73 1620 aa28.89■■■□□ 2.22
DDR1-228ENST00000376575 CHD2O14647 1828 aaKnown RBP28.89■■■□□ 2.22
DDR1-228ENST00000376575 DCAF11Q8TEB1 546 aa28.88■■■□□ 2.21
DDR1-228ENST00000376575 SENP3Q9H4L4 574 aaPredicted RBP28.88■■■□□ 2.21
DDR1-228ENST00000376575 NWD1Q149M9 1564 aa28.88■■■□□ 2.21
DDR1-228ENST00000376575 KCNA6P17658 529 aa28.86■■■□□ 2.21
DDR1-228ENST00000376575 NEUROD1Q13562 356 aa28.86■■■□□ 2.21
DDR1-228ENST00000376575 CPS1P31327 1500 aa28.85■■■□□ 2.21
DDR1-228ENST00000376575 METP08581 1390 aa28.85■■■□□ 2.21
DDR1-228ENST00000376575 L3MBTL2Q969R5 705 aa28.84■■■□□ 2.21
DDR1-228ENST00000376575 PTPRUQ92729 1446 aa28.83■■■□□ 2.21
DDR1-228ENST00000376575 C14orf93Q9H972 538 aaKnown RBP28.82■■■□□ 2.2
DDR1-228ENST00000376575 KDM2AQ9Y2K7 1162 aa28.8■■■□□ 2.2
DDR1-228ENST00000376575 NKTRP30414 1462 aaKnown RBP28.78■■■□□ 2.2
DDR1-228ENST00000376575 XRN1Q8IZH2 1706 aaKnown RBP28.78■■■□□ 2.2
DDR1-228ENST00000376575 LAMC1P11047 1609 aa28.78■■■□□ 2.2
DDR1-228ENST00000376575 PRAG1Q86YV5 1406 aa28.77■■■□□ 2.2
DDR1-228ENST00000376575 ASXL1Q8IXJ9 1541 aa28.76■■■□□ 2.19
DDR1-228ENST00000376575 LRRC7Q96NW7 1537 aa28.76■■■□□ 2.19
DDR1-228ENST00000376575 CERKQ8TCT0 537 aa28.76■■■□□ 2.19
DDR1-228ENST00000376575 IQSEC2Q5JU85 1478 aa28.75■■■□□ 2.19
DDR1-228ENST00000376575 CFAP70Q5T0N1 1121 aa28.74■■■□□ 2.19
DDR1-228ENST00000376575 CCER1Q8TC90 406 aaPredicted RBP28.74■■■□□ 2.19
DDR1-228ENST00000376575 AMOTL2Q9Y2J4 779 aa28.74■■■□□ 2.19
DDR1-228ENST00000376575 KIAA1210Q9ULL0 1709 aa28.71■■■□□ 2.19
DDR1-228ENST00000376575 ADGRB1O14514 1584 aa28.71■■■□□ 2.19
DDR1-228ENST00000376575 XIRP1Q702N8 1843 aaKnown RBP28.7■■■□□ 2.18
DDR1-228ENST00000376575 TONSLQ96HA7 1378 aa28.7■■■□□ 2.18
DDR1-228ENST00000376575 TECPR2O15040 1411 aa28.68■■■□□ 2.18
DDR1-228ENST00000376575 LRPPRCP42704 1394 aaKnown RBP28.67■■■□□ 2.18
DDR1-228ENST00000376575 TMEM132EQ6IEE7 984 aa28.67■■■□□ 2.18
DDR1-228ENST00000376575 TIMELESSQ9UNS1 1208 aa28.67■■■□□ 2.18
DDR1-228ENST00000376575 PTCH1Q13635 1447 aa28.67■■■□□ 2.18
DDR1-228ENST00000376575 ABCC11Q96J66 1382 aa28.66■■■□□ 2.18
DDR1-228ENST00000376575 NCOA3Q9Y6Q9 1424 aa28.66■■■□□ 2.18
DDR1-228ENST00000376575 TMEM94Q12767 1356 aa28.65■■■□□ 2.18
DDR1-228ENST00000376575 PROSER2Q86WR7 435 aaPredicted RBP28.65■■■□□ 2.18
DDR1-228ENST00000376575 YTHDC2Q9H6S0 1430 aaKnown RBP28.65■■■□□ 2.18
DDR1-228ENST00000376575 KNDC1Q76NI1 1749 aa28.64■■■□□ 2.18
DDR1-228ENST00000376575 ROBO2Q9HCK4 1378 aa28.62■■■□□ 2.17
DDR1-228ENST00000376575 NBPF8Q3BBV2 869 aa28.6■■■□□ 2.17
DDR1-228ENST00000376575 SIRT1Q96EB6 747 aa28.6■■■□□ 2.17
DDR1-228ENST00000376575 TRPM1Q7Z4N2 1603 aa28.59■■■□□ 2.17
DDR1-228ENST00000376575 NBPF1Q3BBV0 1214 aa28.57■■■□□ 2.16
DDR1-228ENST00000376575 RBM33Q96EV2 1170 aaKnown RBP28.57■■■□□ 2.16
DDR1-228ENST00000376575 DLC1Q96QB1 1528 aa28.57■■■□□ 2.16
DDR1-228ENST00000376575 FAM135BQ49AJ0 1406 aa28.55■■■□□ 2.16
DDR1-228ENST00000376575 STK26Q9P289 416 aa28.54■■■□□ 2.16
DDR1-228ENST00000376575 GPRASP1Q5JY77 1395 aa28.51■■■□□ 2.16
DDR1-228ENST00000376575 C19orf44Q9H6X5 657 aa28.5■■■□□ 2.15
DDR1-228ENST00000376575 RALGAPBQ86X10 1494 aa28.49■■■□□ 2.15
DDR1-228ENST00000376575 ADGRL3Q9HAR2 1447 aa28.49■■■□□ 2.15
DDR1-228ENST00000376575 WAPLQ7Z5K2 1190 aa28.48■■■□□ 2.15
DDR1-228ENST00000376575 MSH6P52701 1360 aa28.48■■■□□ 2.15
DDR1-228ENST00000376575 PLEKHH1Q9ULM0 1364 aa28.48■■■□□ 2.15
DDR1-228ENST00000376575 NALCNQ8IZF0 1738 aa28.47■■■□□ 2.15
DDR1-228ENST00000376575 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.47■■■□□ 2.15
DDR1-228ENST00000376575 ARHGEF28Q8N1W1 1705 aaKnown RBP28.46■■■□□ 2.15
DDR1-228ENST00000376575 DCCP43146 1447 aa28.46■■■□□ 2.15
DDR1-228ENST00000376575 TRAK1Q9UPV9 953 aa28.46■■■□□ 2.15
DDR1-228ENST00000376575 ROCK2O75116 1388 aaKnown RBP28.45■■■□□ 2.14
DDR1-228ENST00000376575 FBXO41Q8TF61 875 aa28.44■■■□□ 2.14
DDR1-228ENST00000376575 PRAM1Q96QH2 718 aa28.43■■■□□ 2.14
DDR1-228ENST00000376575 TOM1O60784 492 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms