RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 TMEM131LA2VDJ0 1609 aa29.89■■■□□ 2.38
C6orf48-205ENST00000375640 TOM1O60784 492 aa29.89■■■□□ 2.38
C6orf48-205ENST00000375640 PLEKHG1Q9ULL1 1385 aa29.89■■■□□ 2.37
C6orf48-205ENST00000375640 KCNA6P17658 529 aa29.88■■■□□ 2.37
C6orf48-205ENST00000375640 ACIN1Q9UKV3 1341 aaKnown RBP29.88■■■□□ 2.37
C6orf48-205ENST00000375640 TBX22Q9Y458 520 aa29.84■■■□□ 2.37
C6orf48-205ENST00000375640 LRRC7Q96NW7 1537 aa29.84■■■□□ 2.37
C6orf48-205ENST00000375640 NUTM2DQ5VT03 806 aaPredicted RBP29.83■■■□□ 2.37
C6orf48-205ENST00000375640 ZNF326Q5BKZ1 582 aaKnown RBP29.81■■■□□ 2.36
C6orf48-205ENST00000375640 SENP3Q9H4L4 574 aaPredicted RBP29.8■■■□□ 2.36
C6orf48-205ENST00000375640 MPHOSPH9Q99550 1183 aa29.79■■■□□ 2.36
C6orf48-205ENST00000375640 SETD5Q9C0A6 1442 aa29.79■■■□□ 2.36
C6orf48-205ENST00000375640 TRPM2O94759 1503 aa29.76■■■□□ 2.36
C6orf48-205ENST00000375640 PIP4K2BP78356 416 aa29.76■■■□□ 2.35
C6orf48-205ENST00000375640 PROSER2Q86WR7 435 aaPredicted RBP29.76■■■□□ 2.35
C6orf48-205ENST00000375640 FOXD1Q16676 465 aa29.73■■■□□ 2.35
C6orf48-205ENST00000375640 SPHKAPQ2M3C7 1700 aa29.73■■■□□ 2.35
C6orf48-205ENST00000375640 SCAF1Q9H7N4 1312 aaKnown RBP29.72■■■□□ 2.35
C6orf48-205ENST00000375640 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
C6orf48-205ENST00000375640 ADAMTS13Q76LX8 1427 aa29.71■■■□□ 2.35
C6orf48-205ENST00000375640 TMEM94Q12767 1356 aa29.71■■■□□ 2.35
C6orf48-205ENST00000375640 PIK3R4Q99570 1358 aa29.69■■■□□ 2.34
C6orf48-205ENST00000375640 RPGRIP1LQ68CZ1 1315 aa29.68■■■□□ 2.34
C6orf48-205ENST00000375640 MYO5BQ9ULV0 1848 aa29.67■■■□□ 2.34
C6orf48-205ENST00000375640 CLTCL1P53675 1640 aa29.66■■■□□ 2.34
C6orf48-205ENST00000375640 VGFO15240 615 aaPredicted RBP29.65■■■□□ 2.34
C6orf48-205ENST00000375640 NKTRP30414 1462 aaKnown RBP29.65■■■□□ 2.34
C6orf48-205ENST00000375640 RAB3GAP2Q9H2M9 1393 aa29.64■■■□□ 2.34
C6orf48-205ENST00000375640 RBM33Q96EV2 1170 aaKnown RBP29.64■■■□□ 2.34
C6orf48-205ENST00000375640 HRCP23327 699 aa29.63■■■□□ 2.33
C6orf48-205ENST00000375640 HSPA1LP34931 641 aa29.62■■■□□ 2.33
C6orf48-205ENST00000375640 NWD1Q149M9 1564 aa29.6■■■□□ 2.33
C6orf48-205ENST00000375640 AMOTL2Q9Y2J4 779 aa29.6■■■□□ 2.33
C6orf48-205ENST00000375640 CCDC144AA2RUR9 1427 aa29.6■■■□□ 2.33
C6orf48-205ENST00000375640 DIP2AQ14689 1571 aa29.6■■■□□ 2.33
C6orf48-205ENST00000375640 ALKQ9UM73 1620 aa29.59■■■□□ 2.33
C6orf48-205ENST00000375640 NCOA3Q9Y6Q9 1424 aa29.57■■■□□ 2.32
C6orf48-205ENST00000375640 NEXMIFQ5QGS0 1516 aa29.56■■■□□ 2.32
C6orf48-205ENST00000375640 MSH6P52701 1360 aa29.55■■■□□ 2.32
C6orf48-205ENST00000375640 SETBP1Q9Y6X0 1596 aa29.55■■■□□ 2.32
C6orf48-205ENST00000375640 RGL3Q3MIN7 710 aa29.52■■■□□ 2.32
C6orf48-205ENST00000375640 PTPRUQ92729 1446 aa29.52■■■□□ 2.32
C6orf48-205ENST00000375640 METP08581 1390 aa29.52■■■□□ 2.32
C6orf48-205ENST00000375640 C14orf37Q86TY3 774 aa29.5■■■□□ 2.31
C6orf48-205ENST00000375640 FAM135BQ49AJ0 1406 aa29.5■■■□□ 2.31
C6orf48-205ENST00000375640 C19orf44Q9H6X5 657 aa29.49■■■□□ 2.31
C6orf48-205ENST00000375640 CHD2O14647 1828 aaKnown RBP29.49■■■□□ 2.31
C6orf48-205ENST00000375640 KIF1BO60333 1816 aa29.48■■■□□ 2.31
C6orf48-205ENST00000375640 SPATA31E1Q6ZUB1 1445 aa29.48■■■□□ 2.31
C6orf48-205ENST00000375640 SLAIN2Q9P270 581 aa29.48■■■□□ 2.31
C6orf48-205ENST00000375640 XIRP1Q702N8 1843 aaKnown RBP29.45■■■□□ 2.3
C6orf48-205ENST00000375640 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.3
C6orf48-205ENST00000375640 ANKRD30BQ9BXX2 1392 aa29.44■■■□□ 2.3
C6orf48-205ENST00000375640 CADPS2Q86UW7 1296 aa29.44■■■□□ 2.3
C6orf48-205ENST00000375640 ATF3P18847 181 aa29.42■■■□□ 2.3
C6orf48-205ENST00000375640 ADGRF5Q8IZF2 1346 aa29.42■■■□□ 2.3
C6orf48-205ENST00000375640 DISP3Q9P2K9 1392 aa29.41■■■□□ 2.3
C6orf48-205ENST00000375640 XRN1Q8IZH2 1706 aaKnown RBP29.31■■■□□ 2.28
C6orf48-205ENST00000375640 DCCP43146 1447 aa29.29■■■□□ 2.28
C6orf48-205ENST00000375640 PPLO60437 1756 aa29.28■■■□□ 2.28
C6orf48-205ENST00000375640 PTCH1Q13635 1447 aa29.28■■■□□ 2.28
C6orf48-205ENST00000375640 ROBO2Q9HCK4 1378 aa29.27■■■□□ 2.28
C6orf48-205ENST00000375640 C14orf93Q9H972 538 aaKnown RBP29.27■■■□□ 2.28
C6orf48-205ENST00000375640 PRAG1Q86YV5 1406 aa29.27■■■□□ 2.28
C6orf48-205ENST00000375640 PIK3C2GO75747 1445 aa29.25■■■□□ 2.27
C6orf48-205ENST00000375640 STAC3Q96MF2 364 aa29.24■■■□□ 2.27
C6orf48-205ENST00000375640 ADGRL3Q9HAR2 1447 aa29.24■■■□□ 2.27
C6orf48-205ENST00000375640 TMEM132EQ6IEE7 984 aa29.23■■■□□ 2.27
C6orf48-205ENST00000375640 STK26Q9P289 416 aa29.22■■■□□ 2.27
C6orf48-205ENST00000375640 LRPPRCP42704 1394 aaKnown RBP29.22■■■□□ 2.27
C6orf48-205ENST00000375640 ROBO1Q9Y6N7 1651 aa29.21■■■□□ 2.27
C6orf48-205ENST00000375640 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.21■■■□□ 2.27
C6orf48-205ENST00000375640 BRINP3Q76B58 766 aa29.2■■■□□ 2.26
C6orf48-205ENST00000375640 ABCC11Q96J66 1382 aa29.2■■■□□ 2.26
C6orf48-205ENST00000375640 MYOM2P54296 1465 aa29.19■■■□□ 2.26
C6orf48-205ENST00000375640 NRXN1Q9ULB1 1477 aa29.19■■■□□ 2.26
C6orf48-205ENST00000375640 CFAP70Q5T0N1 1121 aa29.19■■■□□ 2.26
C6orf48-205ENST00000375640 SETD1AO15047 1707 aaKnown RBP29.18■■■□□ 2.26
C6orf48-205ENST00000375640 DCAF11Q8TEB1 546 aa29.18■■■□□ 2.26
C6orf48-205ENST00000375640 SIRT1Q96EB6 747 aa29.17■■■□□ 2.26
C6orf48-205ENST00000375640 MST1RQ04912 1400 aa29.17■■■□□ 2.26
C6orf48-205ENST00000375640 ILDR2Q71H61 639 aa29.16■■■□□ 2.26
C6orf48-205ENST00000375640 KDM2AQ9Y2K7 1162 aa29.16■■■□□ 2.26
C6orf48-205ENST00000375640 TECPR2O15040 1411 aa29.15■■■□□ 2.26
C6orf48-205ENST00000375640 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
C6orf48-205ENST00000375640 IFT172Q9UG01 1749 aa29.14■■■□□ 2.25
C6orf48-205ENST00000375640 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
C6orf48-205ENST00000375640 MED1Q15648 1581 aaPredicted RBP29.13■■■□□ 2.25
C6orf48-205ENST00000375640 YTHDC2Q9H6S0 1430 aaKnown RBP29.12■■■□□ 2.25
C6orf48-205ENST00000375640 PHF23Q9BUL5 403 aaPredicted RBP29.12■■■□□ 2.25
C6orf48-205ENST00000375640 JCADQ9P266 1359 aa29.12■■■□□ 2.25
C6orf48-205ENST00000375640 C1orf167Q5SNV9 1468 aa29.07■■■□□ 2.24
C6orf48-205ENST00000375640 ASXL1Q8IXJ9 1541 aa29.07■■■□□ 2.24
C6orf48-205ENST00000375640 PLEKHH1Q9ULM0 1364 aa29.04■■■□□ 2.24
C6orf48-205ENST00000375640 AHDC1Q5TGY3 1603 aaPredicted RBP29.04■■■□□ 2.24
C6orf48-205ENST00000375640 ORAI2Q96SN7 254 aa29.03■■■□□ 2.24
C6orf48-205ENST00000375640 TRIM26Q12899 539 aaPredicted RBP29.02■■■□□ 2.24
C6orf48-205ENST00000375640 LRRC59Q96AG4 307 aaKnown RBP29.02■■■□□ 2.24
C6orf48-205ENST00000375640 PHLPP1O60346 1717 aa29.01■■■□□ 2.23
C6orf48-205ENST00000375640 NALCNQ8IZF0 1738 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms