RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 RALBP1Q15311 655 aa16.6■□□□□ 0.25
UBR4-203ENST00000375225 BCANQ96GW7 911 aa16.6■□□□□ 0.25
UBR4-203ENST00000375225 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
UBR4-203ENST00000375225 GPRASP1Q5JY77 1395 aa16.6■□□□□ 0.25
UBR4-203ENST00000375225 PREX1Q8TCU6 1659 aa16.58■□□□□ 0.25
UBR4-203ENST00000375225 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
UBR4-203ENST00000375225 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
UBR4-203ENST00000375225 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
UBR4-203ENST00000375225 NOS1P29475 1434 aa16.56■□□□□ 0.24
UBR4-203ENST00000375225 UGGT1Q9NYU2 1555 aa16.56■□□□□ 0.24
UBR4-203ENST00000375225 ESF1Q9H501 851 aaKnown RBP16.55■□□□□ 0.24
UBR4-203ENST00000375225 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
UBR4-203ENST00000375225 PIK3C2BO00750 1634 aa16.55■□□□□ 0.24
UBR4-203ENST00000375225 TMC1Q8TDI8 760 aa16.55■□□□□ 0.24
UBR4-203ENST00000375225 SYNMO15061 1565 aa16.54■□□□□ 0.24
UBR4-203ENST00000375225 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
UBR4-203ENST00000375225 MROH2AA6NES4 1674 aa16.54■□□□□ 0.24
UBR4-203ENST00000375225 ADGRB3O60242 1522 aa16.54■□□□□ 0.24
UBR4-203ENST00000375225 MLECQ14165 292 aa16.54■□□□□ 0.24
UBR4-203ENST00000375225 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
UBR4-203ENST00000375225 IFT172Q9UG01 1749 aa16.52■□□□□ 0.23
UBR4-203ENST00000375225 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
UBR4-203ENST00000375225 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
UBR4-203ENST00000375225 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
UBR4-203ENST00000375225 MADDQ8WXG6 1647 aa16.5■□□□□ 0.23
UBR4-203ENST00000375225 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
UBR4-203ENST00000375225 TMF1P82094 1093 aa16.5■□□□□ 0.23
UBR4-203ENST00000375225 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
UBR4-203ENST00000375225 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
UBR4-203ENST00000375225 MYOM2P54296 1465 aa16.48■□□□□ 0.23
UBR4-203ENST00000375225 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
UBR4-203ENST00000375225 PPLO60437 1756 aa16.47■□□□□ 0.23
UBR4-203ENST00000375225 FER1L4A9Z1Z3 1794 aa16.47■□□□□ 0.23
UBR4-203ENST00000375225 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
UBR4-203ENST00000375225 KIAA1210Q9ULL0 1709 aa16.46■□□□□ 0.22
UBR4-203ENST00000375225 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
UBR4-203ENST00000375225 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
UBR4-203ENST00000375225 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
UBR4-203ENST00000375225 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
UBR4-203ENST00000375225 INSRP06213 1382 aa16.44■□□□□ 0.22
UBR4-203ENST00000375225 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
UBR4-203ENST00000375225 ZMYM3Q14202 1370 aa16.44■□□□□ 0.22
UBR4-203ENST00000375225 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
UBR4-203ENST00000375225 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
UBR4-203ENST00000375225 TMEM131LA2VDJ0 1609 aa16.43■□□□□ 0.22
UBR4-203ENST00000375225 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
UBR4-203ENST00000375225 NBPF1Q3BBV0 1214 aa16.41■□□□□ 0.22
UBR4-203ENST00000375225 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
UBR4-203ENST00000375225 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
UBR4-203ENST00000375225 IDI1Q13907 227 aa16.4■□□□□ 0.22
UBR4-203ENST00000375225 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
UBR4-203ENST00000375225 NEXMIFQ5QGS0 1516 aa16.39■□□□□ 0.21
UBR4-203ENST00000375225 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
UBR4-203ENST00000375225 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
UBR4-203ENST00000375225 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
UBR4-203ENST00000375225 TESK2Q96S53 571 aa16.39■□□□□ 0.21
UBR4-203ENST00000375225 C3P01024 1663 aa16.38■□□□□ 0.21
UBR4-203ENST00000375225 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
UBR4-203ENST00000375225 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
UBR4-203ENST00000375225 TNRQ92752 1358 aa16.37■□□□□ 0.21
UBR4-203ENST00000375225 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
UBR4-203ENST00000375225 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
UBR4-203ENST00000375225 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
UBR4-203ENST00000375225 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
UBR4-203ENST00000375225 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
UBR4-203ENST00000375225 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
UBR4-203ENST00000375225 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
UBR4-203ENST00000375225 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
UBR4-203ENST00000375225 PER1O15534 1290 aaPredicted RBP16.34■□□□□ 0.21
UBR4-203ENST00000375225 RIMS1Q86UR5 1692 aaKnown RBP16.33■□□□□ 0.2
UBR4-203ENST00000375225 PANK3Q9H999 370 aa16.33■□□□□ 0.2
UBR4-203ENST00000375225 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
UBR4-203ENST00000375225 A2ML1A8K2U0 1454 aa16.32■□□□□ 0.2
UBR4-203ENST00000375225 NLRP1Q9C000 1473 aa16.32■□□□□ 0.2
UBR4-203ENST00000375225 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
UBR4-203ENST00000375225 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
UBR4-203ENST00000375225 UBR1Q8IWV7 1749 aa16.3■□□□□ 0.2
UBR4-203ENST00000375225 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
UBR4-203ENST00000375225 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.2
UBR4-203ENST00000375225 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.2
UBR4-203ENST00000375225 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.2
UBR4-203ENST00000375225 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
UBR4-203ENST00000375225 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
UBR4-203ENST00000375225 HDGFP51858 240 aaKnown RBP16.26■□□□□ 0.19
UBR4-203ENST00000375225 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
UBR4-203ENST00000375225 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBR4-203ENST00000375225 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
UBR4-203ENST00000375225 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
UBR4-203ENST00000375225 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
UBR4-203ENST00000375225 ADGRB1O14514 1584 aa16.24■□□□□ 0.19
UBR4-203ENST00000375225 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
UBR4-203ENST00000375225 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBR4-203ENST00000375225 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
UBR4-203ENST00000375225 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
UBR4-203ENST00000375225 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
UBR4-203ENST00000375225 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
UBR4-203ENST00000375225 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
UBR4-203ENST00000375225 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
UBR4-203ENST00000375225 TMEM2Q9UHN6 1383 aa16.2■□□□□ 0.18
UBR4-203ENST00000375225 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms