RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PTMSP20962 102 aa18.13■□□□□ 0.49
NOTCH4-201ENST00000375023 COG3Q96JB2 828 aa18.13■□□□□ 0.49
NOTCH4-201ENST00000375023 PPM1FP49593 454 aaPredicted RBP18.13■□□□□ 0.49
NOTCH4-201ENST00000375023 CCDC34Q96HJ3 373 aa18.13■□□□□ 0.49
NOTCH4-201ENST00000375023 CSPP1Q1MSJ5 1256 aa18.12■□□□□ 0.49
NOTCH4-201ENST00000375023 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
NOTCH4-201ENST00000375023 TEFQ10587 303 aa18.12■□□□□ 0.49
NOTCH4-201ENST00000375023 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
NOTCH4-201ENST00000375023 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
NOTCH4-201ENST00000375023 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
NOTCH4-201ENST00000375023 DDX49Q9Y6V7 483 aaKnown RBP18.1■□□□□ 0.49
NOTCH4-201ENST00000375023 CHMP4BP1P59074 171 aa18.1■□□□□ 0.49
NOTCH4-201ENST00000375023 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
NOTCH4-201ENST00000375023 DIAPH3Q9NSV4 1193 aa18.09■□□□□ 0.49
NOTCH4-201ENST00000375023 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
NOTCH4-201ENST00000375023 HMOX1P09601 288 aa18.08■□□□□ 0.49
NOTCH4-201ENST00000375023 PAF1Q8N7H5 531 aa18.08■□□□□ 0.49
NOTCH4-201ENST00000375023 GOLGA6L19H0YKK7 550 aa18.08■□□□□ 0.48
NOTCH4-201ENST00000375023 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
NOTCH4-201ENST00000375023 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
NOTCH4-201ENST00000375023 TMEM132AQ24JP5 1023 aa18.07■□□□□ 0.48
NOTCH4-201ENST00000375023 APAF1O14727 1248 aa18.07■□□□□ 0.48
NOTCH4-201ENST00000375023 IKQ13123 557 aaPredicted RBP18.07■□□□□ 0.48
NOTCH4-201ENST00000375023 BECN2A8MW95 431 aa18.06■□□□□ 0.48
NOTCH4-201ENST00000375023 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
NOTCH4-201ENST00000375023 TSR1Q2NL82 804 aaKnown RBP18.05■□□□□ 0.48
NOTCH4-201ENST00000375023 NFXL1Q6ZNB6 911 aa18.05■□□□□ 0.48
NOTCH4-201ENST00000375023 PHF14O94880 888 aa18.04■□□□□ 0.48
NOTCH4-201ENST00000375023 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
NOTCH4-201ENST00000375023 ECM2O94769 699 aaPredicted RBP18.04■□□□□ 0.48
NOTCH4-201ENST00000375023 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
NOTCH4-201ENST00000375023 IFIT2P09913 472 aaKnown RBP18.03■□□□□ 0.48
NOTCH4-201ENST00000375023 CCDC27Q2M243 656 aa18.03■□□□□ 0.48
NOTCH4-201ENST00000375023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.03■□□□□ 0.48
NOTCH4-201ENST00000375023 AMOTL1Q8IY63 956 aa18.02■□□□□ 0.48
NOTCH4-201ENST00000375023 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
NOTCH4-201ENST00000375023 NEXNQ0ZGT2 675 aa18.02■□□□□ 0.48
NOTCH4-201ENST00000375023 PDE4AP27815 886 aa18.02■□□□□ 0.47
NOTCH4-201ENST00000375023 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.47
NOTCH4-201ENST00000375023 CCDC43Q96MW1 224 aaKnown RBP18.02■□□□□ 0.47
NOTCH4-201ENST00000375023 FMN1Q68DA7 1419 aa18.02■□□□□ 0.47
NOTCH4-201ENST00000375023 RIPK4P57078 832 aa18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 TRIM29Q14134 588 aa18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 KIF15Q9NS87 1388 aa18.01■□□□□ 0.47
NOTCH4-201ENST00000375023 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
NOTCH4-201ENST00000375023 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
NOTCH4-201ENST00000375023 VPS37CA5D8V6 355 aaPredicted RBP18■□□□□ 0.47
NOTCH4-201ENST00000375023 NEUROD6Q96NK8 337 aa18■□□□□ 0.47
NOTCH4-201ENST00000375023 OSCARQ8IYS5 282 aa18■□□□□ 0.47
NOTCH4-201ENST00000375023 KIF3AQ9Y496 699 aa18■□□□□ 0.47
NOTCH4-201ENST00000375023 NACADO15069 1562 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 STK11IPQ8N1F8 1099 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 SPDYE4A6NLX3 237 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 CPLX1O14810 134 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 TPM2P07951 284 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 BICD2Q8TD16 824 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 CGNL1Q0VF96 1302 aa17.99■□□□□ 0.47
NOTCH4-201ENST00000375023 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
NOTCH4-201ENST00000375023 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
NOTCH4-201ENST00000375023 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
NOTCH4-201ENST00000375023 RRP1P56182 461 aaKnown RBP17.97■□□□□ 0.47
NOTCH4-201ENST00000375023 FAM161AQ3B820 660 aa17.97■□□□□ 0.47
NOTCH4-201ENST00000375023 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
NOTCH4-201ENST00000375023 DDX11L8A8MPP1 907 aa17.96■□□□□ 0.47
NOTCH4-201ENST00000375023 NAP1L1P55209 391 aaKnown RBP17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 TSPYL4Q9UJ04 414 aa17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
NOTCH4-201ENST00000375023 ATP2B2Q01814 1243 aa17.94■□□□□ 0.46
NOTCH4-201ENST00000375023 G3BP1Q13283 466 aaKnown RBP eCLIP17.94■□□□□ 0.46
NOTCH4-201ENST00000375023 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
NOTCH4-201ENST00000375023 TPM1P09493 284 aa17.94■□□□□ 0.46
NOTCH4-201ENST00000375023 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
NOTCH4-201ENST00000375023 CHMP4CQ96CF2 233 aa17.94■□□□□ 0.46
NOTCH4-201ENST00000375023 TTLL5Q6EMB2 1281 aa17.93■□□□□ 0.46
NOTCH4-201ENST00000375023 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
NOTCH4-201ENST00000375023 HOMER1Q86YM7 354 aa17.93■□□□□ 0.46
NOTCH4-201ENST00000375023 E9PSI1 815 aa17.92■□□□□ 0.46
NOTCH4-201ENST00000375023 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
NOTCH4-201ENST00000375023 SKIDA1Q1XH10 827 aa17.92■□□□□ 0.46
NOTCH4-201ENST00000375023 TTLL12Q14166 644 aaPredicted RBP17.92■□□□□ 0.46
NOTCH4-201ENST00000375023 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
NOTCH4-201ENST00000375023 TRDNQ13061 729 aa17.91■□□□□ 0.46
NOTCH4-201ENST00000375023 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
NOTCH4-201ENST00000375023 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
NOTCH4-201ENST00000375023 ERICH2A1L162 156 aa17.9■□□□□ 0.46
NOTCH4-201ENST00000375023 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
NOTCH4-201ENST00000375023 TMEM132EQ6IEE7 984 aa17.9■□□□□ 0.46
NOTCH4-201ENST00000375023 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
NOTCH4-201ENST00000375023 ESCO1Q5FWF5 840 aa17.9■□□□□ 0.46
NOTCH4-201ENST00000375023 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
NOTCH4-201ENST00000375023 ZNF771Q7L3S4 317 aaPredicted RBP17.89■□□□□ 0.45
NOTCH4-201ENST00000375023 PDE3BQ13370 1112 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms