RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 RALGAPBQ86X10 1494 aa16.42■□□□□ 0.22
CSGALNACT2-201ENST00000374466 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
CSGALNACT2-201ENST00000374466 GGT6Q6P531 493 aa16.41■□□□□ 0.22
CSGALNACT2-201ENST00000374466 PLEKHG1Q9ULL1 1385 aa16.39■□□□□ 0.21
CSGALNACT2-201ENST00000374466 TMEM2Q9UHN6 1383 aa16.39■□□□□ 0.21
CSGALNACT2-201ENST00000374466 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
CSGALNACT2-201ENST00000374466 CPS1P31327 1500 aa16.38■□□□□ 0.21
CSGALNACT2-201ENST00000374466 TECPR2O15040 1411 aa16.38■□□□□ 0.21
CSGALNACT2-201ENST00000374466 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
CSGALNACT2-201ENST00000374466 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
CSGALNACT2-201ENST00000374466 SCAF11Q99590 1463 aaKnown RBP16.36■□□□□ 0.21
CSGALNACT2-201ENST00000374466 TRIM52Q96A61 297 aa16.36■□□□□ 0.21
CSGALNACT2-201ENST00000374466 ADGRB2O60241 1585 aa16.35■□□□□ 0.21
CSGALNACT2-201ENST00000374466 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
CSGALNACT2-201ENST00000374466 ALKQ9UM73 1620 aa16.35■□□□□ 0.21
CSGALNACT2-201ENST00000374466 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
CSGALNACT2-201ENST00000374466 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.21
CSGALNACT2-201ENST00000374466 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
CSGALNACT2-201ENST00000374466 ARHGEF28Q8N1W1 1705 aaKnown RBP16.32■□□□□ 0.2
CSGALNACT2-201ENST00000374466 IDI1Q13907 227 aa16.32■□□□□ 0.2
CSGALNACT2-201ENST00000374466 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
CSGALNACT2-201ENST00000374466 CFAP65Q6ZU64 1925 aaKnown RBP16.31■□□□□ 0.2
CSGALNACT2-201ENST00000374466 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
CSGALNACT2-201ENST00000374466 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
CSGALNACT2-201ENST00000374466 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
CSGALNACT2-201ENST00000374466 SIRT1Q96EB6 747 aa16.29■□□□□ 0.2
CSGALNACT2-201ENST00000374466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSGALNACT2-201ENST00000374466 IQSEC2Q5JU85 1478 aa16.28■□□□□ 0.2
CSGALNACT2-201ENST00000374466 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
CSGALNACT2-201ENST00000374466 PTCH1Q13635 1447 aa16.27■□□□□ 0.2
CSGALNACT2-201ENST00000374466 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.2
CSGALNACT2-201ENST00000374466 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
CSGALNACT2-201ENST00000374466 HDGFP51858 240 aaKnown RBP16.26■□□□□ 0.19
CSGALNACT2-201ENST00000374466 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
CSGALNACT2-201ENST00000374466 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
CSGALNACT2-201ENST00000374466 PPP1R15AO75807 674 aaPredicted RBP16.22■□□□□ 0.19
CSGALNACT2-201ENST00000374466 NPHP4O75161 1426 aaPredicted RBP16.22■□□□□ 0.19
CSGALNACT2-201ENST00000374466 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
CSGALNACT2-201ENST00000374466 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
CSGALNACT2-201ENST00000374466 C14orf93Q9H972 538 aaKnown RBP16.21■□□□□ 0.19
CSGALNACT2-201ENST00000374466 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
CSGALNACT2-201ENST00000374466 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
CSGALNACT2-201ENST00000374466 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
CSGALNACT2-201ENST00000374466 TOPAZ1Q8N9V7 1692 aa16.18■□□□□ 0.18
CSGALNACT2-201ENST00000374466 MLECQ14165 292 aa16.18■□□□□ 0.18
CSGALNACT2-201ENST00000374466 TBX22Q9Y458 520 aa16.18■□□□□ 0.18
CSGALNACT2-201ENST00000374466 LRPPRCP42704 1394 aaKnown RBP16.18■□□□□ 0.18
CSGALNACT2-201ENST00000374466 FOXD1Q16676 465 aa16.17■□□□□ 0.18
CSGALNACT2-201ENST00000374466 L3MBTL2Q969R5 705 aa16.16■□□□□ 0.18
CSGALNACT2-201ENST00000374466 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
CSGALNACT2-201ENST00000374466 CDC42BPGQ6DT37 1551 aa16.16■□□□□ 0.18
CSGALNACT2-201ENST00000374466 LTBP4Q8N2S1 1624 aa16.16■□□□□ 0.18
CSGALNACT2-201ENST00000374466 USP54Q70EL1 1684 aa16.15■□□□□ 0.18
CSGALNACT2-201ENST00000374466 PUS7Q96PZ0 661 aaKnown RBP16.15■□□□□ 0.18
CSGALNACT2-201ENST00000374466 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
CSGALNACT2-201ENST00000374466 DCCP43146 1447 aa16.13■□□□□ 0.17
CSGALNACT2-201ENST00000374466 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
CSGALNACT2-201ENST00000374466 FMN2Q9NZ56 1722 aa16.12■□□□□ 0.17
CSGALNACT2-201ENST00000374466 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
CSGALNACT2-201ENST00000374466 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
CSGALNACT2-201ENST00000374466 PTPRUQ92729 1446 aa16.1■□□□□ 0.17
CSGALNACT2-201ENST00000374466 NALCNQ8IZF0 1738 aa16.1■□□□□ 0.17
CSGALNACT2-201ENST00000374466 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
CSGALNACT2-201ENST00000374466 ITSN1Q15811 1721 aa16.1■□□□□ 0.17
CSGALNACT2-201ENST00000374466 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
CSGALNACT2-201ENST00000374466 ADGRF5Q8IZF2 1346 aa16.09■□□□□ 0.17
CSGALNACT2-201ENST00000374466 LTKP29376 864 aa16.09■□□□□ 0.17
CSGALNACT2-201ENST00000374466 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.09■□□□□ 0.17
CSGALNACT2-201ENST00000374466 USP32Q8NFA0 1604 aa16.08■□□□□ 0.16
CSGALNACT2-201ENST00000374466 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
CSGALNACT2-201ENST00000374466 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
CSGALNACT2-201ENST00000374466 MYOM1P52179 1685 aa16.06■□□□□ 0.16
CSGALNACT2-201ENST00000374466 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
CSGALNACT2-201ENST00000374466 EIF3AQ14152 1382 aaKnown RBP16.05■□□□□ 0.16
CSGALNACT2-201ENST00000374466 LRRC7Q96NW7 1537 aa16.05■□□□□ 0.16
CSGALNACT2-201ENST00000374466 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
CSGALNACT2-201ENST00000374466 MST1RQ04912 1400 aa16.03■□□□□ 0.16
CSGALNACT2-201ENST00000374466 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
CSGALNACT2-201ENST00000374466 METP08581 1390 aa16.02■□□□□ 0.16
CSGALNACT2-201ENST00000374466 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.16
CSGALNACT2-201ENST00000374466 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
CSGALNACT2-201ENST00000374466 TULP4Q9NRJ4 1543 aa16.01■□□□□ 0.15
CSGALNACT2-201ENST00000374466 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
CSGALNACT2-201ENST00000374466 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
CSGALNACT2-201ENST00000374466 KCNA6P17658 529 aa15.99■□□□□ 0.15
CSGALNACT2-201ENST00000374466 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
CSGALNACT2-201ENST00000374466 MON2Q7Z3U7 1717 aa15.98■□□□□ 0.15
CSGALNACT2-201ENST00000374466 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
CSGALNACT2-201ENST00000374466 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
CSGALNACT2-201ENST00000374466 BRD4O60885 1362 aaPredicted RBP15.96■□□□□ 0.15
CSGALNACT2-201ENST00000374466 NHSL1Q5SYE7 1610 aa15.95■□□□□ 0.14
CSGALNACT2-201ENST00000374466 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
CSGALNACT2-201ENST00000374466 USP47Q96K76 1375 aa15.94■□□□□ 0.14
CSGALNACT2-201ENST00000374466 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
CSGALNACT2-201ENST00000374466 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
CSGALNACT2-201ENST00000374466 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
CSGALNACT2-201ENST00000374466 TESK2Q96S53 571 aa15.91■□□□□ 0.14
CSGALNACT2-201ENST00000374466 ATP7BP35670 1465 aa15.91■□□□□ 0.14
CSGALNACT2-201ENST00000374466 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
CSGALNACT2-201ENST00000374466 TRPM3Q9HCF6 1732 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms