RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PPP1R15AO75807 674 aaPredicted RBP23.48■■□□□ 1.35
HDHD3-202ENST00000374180 MYO5BQ9ULV0 1848 aa23.47■■□□□ 1.35
HDHD3-202ENST00000374180 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
HDHD3-202ENST00000374180 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.34
HDHD3-202ENST00000374180 BCANQ96GW7 911 aa23.45■■□□□ 1.34
HDHD3-202ENST00000374180 ANKRD30BQ9BXX2 1392 aa23.43■■□□□ 1.34
HDHD3-202ENST00000374180 KIF1BO60333 1816 aa23.43■■□□□ 1.34
HDHD3-202ENST00000374180 IQGAP1P46940 1657 aa23.42■■□□□ 1.34
HDHD3-202ENST00000374180 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
HDHD3-202ENST00000374180 RGL3Q3MIN7 710 aa23.4■■□□□ 1.34
HDHD3-202ENST00000374180 PCGF6Q9BYE7 350 aa23.4■■□□□ 1.34
HDHD3-202ENST00000374180 ZNF335Q9H4Z2 1342 aaPredicted RBP23.4■■□□□ 1.34
HDHD3-202ENST00000374180 PLEKHG1Q9ULL1 1385 aa23.39■■□□□ 1.33
HDHD3-202ENST00000374180 SLC26A8Q96RN1 970 aa23.38■■□□□ 1.33
HDHD3-202ENST00000374180 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
HDHD3-202ENST00000374180 VGFO15240 615 aaPredicted RBP23.36■■□□□ 1.33
HDHD3-202ENST00000374180 SPATA31E1Q6ZUB1 1445 aa23.35■■□□□ 1.33
HDHD3-202ENST00000374180 CERKQ8TCT0 537 aa23.32■■□□□ 1.32
HDHD3-202ENST00000374180 NEXMIFQ5QGS0 1516 aa23.32■■□□□ 1.32
HDHD3-202ENST00000374180 TBX22Q9Y458 520 aa23.31■■□□□ 1.32
HDHD3-202ENST00000374180 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
HDHD3-202ENST00000374180 DHX57Q6P158 1386 aaKnown RBP23.28■■□□□ 1.32
HDHD3-202ENST00000374180 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
HDHD3-202ENST00000374180 KCNA6P17658 529 aa23.25■■□□□ 1.31
HDHD3-202ENST00000374180 ADGRF5Q8IZF2 1346 aa23.23■■□□□ 1.31
HDHD3-202ENST00000374180 CPS1P31327 1500 aa23.23■■□□□ 1.31
HDHD3-202ENST00000374180 PPLO60437 1756 aa23.22■■□□□ 1.31
HDHD3-202ENST00000374180 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
HDHD3-202ENST00000374180 DIP2AQ14689 1571 aa23.2■■□□□ 1.31
HDHD3-202ENST00000374180 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
HDHD3-202ENST00000374180 SIN3AQ96ST3 1273 aa23.19■■□□□ 1.3
HDHD3-202ENST00000374180 PIK3R4Q99570 1358 aa23.19■■□□□ 1.3
HDHD3-202ENST00000374180 KDM2AQ9Y2K7 1162 aa23.18■■□□□ 1.3
HDHD3-202ENST00000374180 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
HDHD3-202ENST00000374180 NEUROD1Q13562 356 aa23.17■■□□□ 1.3
HDHD3-202ENST00000374180 STRCP1A6NGW2 1772 aa23.17■■□□□ 1.3
HDHD3-202ENST00000374180 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
HDHD3-202ENST00000374180 STAC3Q96MF2 364 aa23.17■■□□□ 1.3
HDHD3-202ENST00000374180 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
HDHD3-202ENST00000374180 METP08581 1390 aa23.16■■□□□ 1.3
HDHD3-202ENST00000374180 LRRC7Q96NW7 1537 aa23.15■■□□□ 1.3
HDHD3-202ENST00000374180 IFT172Q9UG01 1749 aa23.15■■□□□ 1.3
HDHD3-202ENST00000374180 IQSEC2Q5JU85 1478 aa23.14■■□□□ 1.3
HDHD3-202ENST00000374180 CHD2O14647 1828 aaKnown RBP23.13■■□□□ 1.29
HDHD3-202ENST00000374180 ALKQ9UM73 1620 aa23.13■■□□□ 1.29
HDHD3-202ENST00000374180 MYOM2P54296 1465 aa23.13■■□□□ 1.29
HDHD3-202ENST00000374180 FBXO41Q8TF61 875 aa23.12■■□□□ 1.29
HDHD3-202ENST00000374180 PIK3C2GO75747 1445 aa23.12■■□□□ 1.29
HDHD3-202ENST00000374180 PTPRUQ92729 1446 aa23.12■■□□□ 1.29
HDHD3-202ENST00000374180 NWD1Q149M9 1564 aa23.11■■□□□ 1.29
HDHD3-202ENST00000374180 RBM33Q96EV2 1170 aaKnown RBP23.11■■□□□ 1.29
HDHD3-202ENST00000374180 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
HDHD3-202ENST00000374180 TMEM94Q12767 1356 aa23.1■■□□□ 1.29
HDHD3-202ENST00000374180 C14orf93Q9H972 538 aaKnown RBP23.1■■□□□ 1.29
HDHD3-202ENST00000374180 NRXN1Q9ULB1 1477 aa23.1■■□□□ 1.29
HDHD3-202ENST00000374180 CFAP70Q5T0N1 1121 aa23.08■■□□□ 1.29
HDHD3-202ENST00000374180 UBAP1LF5GYI3 381 aa23.07■■□□□ 1.28
HDHD3-202ENST00000374180 L3MBTL2Q969R5 705 aa23.07■■□□□ 1.28
HDHD3-202ENST00000374180 TMEM132EQ6IEE7 984 aa23.06■■□□□ 1.28
HDHD3-202ENST00000374180 TOM1O60784 492 aa23.04■■□□□ 1.28
HDHD3-202ENST00000374180 C14orf37Q86TY3 774 aa23.04■■□□□ 1.28
HDHD3-202ENST00000374180 STK26Q9P289 416 aa23.04■■□□□ 1.28
HDHD3-202ENST00000374180 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
HDHD3-202ENST00000374180 ILDR1Q86SU0 546 aaPredicted RBP23.03■■□□□ 1.28
HDHD3-202ENST00000374180 XRN1Q8IZH2 1706 aaKnown RBP23.01■■□□□ 1.27
HDHD3-202ENST00000374180 NCOA3Q9Y6Q9 1424 aa23■■□□□ 1.27
HDHD3-202ENST00000374180 LRPPRCP42704 1394 aaKnown RBP22.99■■□□□ 1.27
HDHD3-202ENST00000374180 MSH6P52701 1360 aa22.99■■□□□ 1.27
HDHD3-202ENST00000374180 CCER1Q8TC90 406 aaPredicted RBP22.98■■□□□ 1.27
HDHD3-202ENST00000374180 XIRP1Q702N8 1843 aaKnown RBP22.98■■□□□ 1.27
HDHD3-202ENST00000374180 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
HDHD3-202ENST00000374180 C19orf44Q9H6X5 657 aa22.98■■□□□ 1.27
HDHD3-202ENST00000374180 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
HDHD3-202ENST00000374180 ABCC11Q96J66 1382 aa22.97■■□□□ 1.27
HDHD3-202ENST00000374180 ROBO2Q9HCK4 1378 aa22.97■■□□□ 1.27
HDHD3-202ENST00000374180 LAMC1P11047 1609 aa22.97■■□□□ 1.27
HDHD3-202ENST00000374180 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
HDHD3-202ENST00000374180 PIP4K2BP78356 416 aa22.96■■□□□ 1.27
HDHD3-202ENST00000374180 PTCH1Q13635 1447 aa22.96■■□□□ 1.27
HDHD3-202ENST00000374180 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
HDHD3-202ENST00000374180 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
HDHD3-202ENST00000374180 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
HDHD3-202ENST00000374180 TECPR2O15040 1411 aa22.92■■□□□ 1.26
HDHD3-202ENST00000374180 ATF3P18847 181 aa22.92■■□□□ 1.26
HDHD3-202ENST00000374180 WAPLQ7Z5K2 1190 aa22.92■■□□□ 1.26
HDHD3-202ENST00000374180 CADPS2Q86UW7 1296 aa22.91■■□□□ 1.26
HDHD3-202ENST00000374180 SIRT1Q96EB6 747 aa22.91■■□□□ 1.26
HDHD3-202ENST00000374180 NBPF1Q3BBV0 1214 aa22.9■■□□□ 1.26
HDHD3-202ENST00000374180 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
HDHD3-202ENST00000374180 ADGRB1O14514 1584 aa22.9■■□□□ 1.26
HDHD3-202ENST00000374180 SLAIN2Q9P270 581 aa22.89■■□□□ 1.25
HDHD3-202ENST00000374180 FAM135BQ49AJ0 1406 aa22.87■■□□□ 1.25
HDHD3-202ENST00000374180 ADGRL3Q9HAR2 1447 aa22.87■■□□□ 1.25
HDHD3-202ENST00000374180 PRAM1Q96QH2 718 aa22.86■■□□□ 1.25
HDHD3-202ENST00000374180 POGKQ9P215 609 aa22.86■■□□□ 1.25
HDHD3-202ENST00000374180 NBPF8Q3BBV2 869 aa22.85■■□□□ 1.25
HDHD3-202ENST00000374180 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
HDHD3-202ENST00000374180 PLEKHH1Q9ULM0 1364 aa22.85■■□□□ 1.25
HDHD3-202ENST00000374180 KIAA1210Q9ULL0 1709 aa22.85■■□□□ 1.25
HDHD3-202ENST00000374180 DCCP43146 1447 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms