RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 NBPF1Q3BBV0 1214 aa18.32■□□□□ 0.52
A1CF-204ENST00000373997 NEFLP07196 543 aa18.31■□□□□ 0.52
A1CF-204ENST00000373997 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
A1CF-204ENST00000373997 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
A1CF-204ENST00000373997 FKBP8Q14318 412 aa18.31■□□□□ 0.52
A1CF-204ENST00000373997 MYOM2P54296 1465 aa18.3■□□□□ 0.52
A1CF-204ENST00000373997 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
A1CF-204ENST00000373997 IQGAP1P46940 1657 aa18.29■□□□□ 0.52
A1CF-204ENST00000373997 ERVK-7P63135 1459 aa18.27■□□□□ 0.52
A1CF-204ENST00000373997 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.51
A1CF-204ENST00000373997 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
A1CF-204ENST00000373997 ST20-MTHFSA0A0A6YYL1 179 aa18.26■□□□□ 0.51
A1CF-204ENST00000373997 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
A1CF-204ENST00000373997 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
A1CF-204ENST00000373997 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
A1CF-204ENST00000373997 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
A1CF-204ENST00000373997 TMEM131LA2VDJ0 1609 aa18.24■□□□□ 0.51
A1CF-204ENST00000373997 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
A1CF-204ENST00000373997 NEXMIFQ5QGS0 1516 aa18.22■□□□□ 0.51
A1CF-204ENST00000373997 SPATA31D1Q6ZQQ2 1576 aa18.22■□□□□ 0.51
A1CF-204ENST00000373997 IDI1Q13907 227 aa18.22■□□□□ 0.51
A1CF-204ENST00000373997 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
A1CF-204ENST00000373997 BCANQ96GW7 911 aa18.21■□□□□ 0.51
A1CF-204ENST00000373997 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
A1CF-204ENST00000373997 SLC52A1Q9NWF4 448 aa18.19■□□□□ 0.5
A1CF-204ENST00000373997 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
A1CF-204ENST00000373997 CFAP70Q5T0N1 1121 aa18.17■□□□□ 0.5
A1CF-204ENST00000373997 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
A1CF-204ENST00000373997 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
A1CF-204ENST00000373997 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
A1CF-204ENST00000373997 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
A1CF-204ENST00000373997 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
A1CF-204ENST00000373997 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.49
A1CF-204ENST00000373997 C3P01024 1663 aa18.12■□□□□ 0.49
A1CF-204ENST00000373997 DISP3Q9P2K9 1392 aa18.12■□□□□ 0.49
A1CF-204ENST00000373997 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
A1CF-204ENST00000373997 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
A1CF-204ENST00000373997 TESK2Q96S53 571 aa18.11■□□□□ 0.49
A1CF-204ENST00000373997 EIF3AQ14152 1382 aaKnown RBP18.1■□□□□ 0.49
A1CF-204ENST00000373997 MYO3AQ8NEV4 1616 aa18.1■□□□□ 0.49
A1CF-204ENST00000373997 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
A1CF-204ENST00000373997 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
A1CF-204ENST00000373997 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
A1CF-204ENST00000373997 A2ML1A8K2U0 1454 aa18.09■□□□□ 0.49
A1CF-204ENST00000373997 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.49
A1CF-204ENST00000373997 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.49
A1CF-204ENST00000373997 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
A1CF-204ENST00000373997 ARHGEF28Q8N1W1 1705 aaKnown RBP18.07■□□□□ 0.48
A1CF-204ENST00000373997 TNRQ92752 1358 aa18.07■□□□□ 0.48
A1CF-204ENST00000373997 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
A1CF-204ENST00000373997 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
A1CF-204ENST00000373997 TMF1P82094 1093 aa18.06■□□□□ 0.48
A1CF-204ENST00000373997 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
A1CF-204ENST00000373997 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
A1CF-204ENST00000373997 TMEM132EQ6IEE7 984 aa18.05■□□□□ 0.48
A1CF-204ENST00000373997 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
A1CF-204ENST00000373997 ASXL1Q8IXJ9 1541 aa18.03■□□□□ 0.48
A1CF-204ENST00000373997 MYOM1P52179 1685 aa18.03■□□□□ 0.48
A1CF-204ENST00000373997 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
A1CF-204ENST00000373997 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
A1CF-204ENST00000373997 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
A1CF-204ENST00000373997 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
A1CF-204ENST00000373997 CEBPAP49715 358 aaPredicted RBP18.02■□□□□ 0.47
A1CF-204ENST00000373997 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.47
A1CF-204ENST00000373997 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
A1CF-204ENST00000373997 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
A1CF-204ENST00000373997 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
A1CF-204ENST00000373997 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
A1CF-204ENST00000373997 NRXN3Q9Y4C0 1643 aa17.97■□□□□ 0.47
A1CF-204ENST00000373997 NLRP1Q9C000 1473 aa17.96■□□□□ 0.46
A1CF-204ENST00000373997 CDCA8Q53HL2 280 aa17.95■□□□□ 0.46
A1CF-204ENST00000373997 STK26Q9P289 416 aa17.94■□□□□ 0.46
A1CF-204ENST00000373997 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
A1CF-204ENST00000373997 ADAMTSL3P82987 1691 aa17.94■□□□□ 0.46
A1CF-204ENST00000373997 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
A1CF-204ENST00000373997 PTPRMP28827 1452 aa17.93■□□□□ 0.46
A1CF-204ENST00000373997 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
A1CF-204ENST00000373997 CCDC184Q52MB2 194 aa17.92■□□□□ 0.46
A1CF-204ENST00000373997 PANK3Q9H999 370 aa17.92■□□□□ 0.46
A1CF-204ENST00000373997 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
A1CF-204ENST00000373997 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
A1CF-204ENST00000373997 TMEM2Q9UHN6 1383 aa17.9■□□□□ 0.46
A1CF-204ENST00000373997 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.45
A1CF-204ENST00000373997 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
A1CF-204ENST00000373997 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
A1CF-204ENST00000373997 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
A1CF-204ENST00000373997 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
A1CF-204ENST00000373997 FANCIQ9NVI1 1328 aa17.86■□□□□ 0.45
A1CF-204ENST00000373997 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
A1CF-204ENST00000373997 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
A1CF-204ENST00000373997 CEP170BQ9Y4F5 1589 aaPredicted RBP17.85■□□□□ 0.45
A1CF-204ENST00000373997 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
A1CF-204ENST00000373997 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
A1CF-204ENST00000373997 SLIT1O75093 1534 aa17.83■□□□□ 0.45
A1CF-204ENST00000373997 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.45
A1CF-204ENST00000373997 CC2D1BQ5T0F9 858 aaKnown RBP17.83■□□□□ 0.45
A1CF-204ENST00000373997 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
A1CF-204ENST00000373997 DLC1Q96QB1 1528 aa17.83■□□□□ 0.44
A1CF-204ENST00000373997 POGKQ9P215 609 aa17.83■□□□□ 0.44
A1CF-204ENST00000373997 METP08581 1390 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms