RNA–Protein interactions for RNA: ENST00000373910.8

UBE2D1-201, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D1, Length 2,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-201ENST00000373910 SIGLEC1Q9BZZ2 1709 aa20.52■□□□□ 0.88
UBE2D1-201ENST00000373910 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.87
UBE2D1-201ENST00000373910 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
UBE2D1-201ENST00000373910 COL17A1Q9UMD9 1497 aaPredicted RBP20.51■□□□□ 0.87
UBE2D1-201ENST00000373910 NEFLP07196 543 aa20.5■□□□□ 0.87
UBE2D1-201ENST00000373910 NOS1P29475 1434 aa20.5■□□□□ 0.87
UBE2D1-201ENST00000373910 TMF1P82094 1093 aa20.5■□□□□ 0.87
UBE2D1-201ENST00000373910 NUTM2DQ5VT03 806 aaPredicted RBP20.49■□□□□ 0.87
UBE2D1-201ENST00000373910 NEURL4Q96JN8 1562 aa20.48■□□□□ 0.87
UBE2D1-201ENST00000373910 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
UBE2D1-201ENST00000373910 ADGRB3O60242 1522 aa20.48■□□□□ 0.87
UBE2D1-201ENST00000373910 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
UBE2D1-201ENST00000373910 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
UBE2D1-201ENST00000373910 IFT172Q9UG01 1749 aa20.46■□□□□ 0.87
UBE2D1-201ENST00000373910 MYOM2P54296 1465 aa20.46■□□□□ 0.87
UBE2D1-201ENST00000373910 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
UBE2D1-201ENST00000373910 SYNMO15061 1565 aa20.45■□□□□ 0.86
UBE2D1-201ENST00000373910 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
UBE2D1-201ENST00000373910 PANK3Q9H999 370 aa20.44■□□□□ 0.86
UBE2D1-201ENST00000373910 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
UBE2D1-201ENST00000373910 IDI1Q13907 227 aa20.44■□□□□ 0.86
UBE2D1-201ENST00000373910 FBXO31Q5XUX0 539 aaPredicted RBP20.43■□□□□ 0.86
UBE2D1-201ENST00000373910 MLECQ14165 292 aa20.43■□□□□ 0.86
UBE2D1-201ENST00000373910 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
UBE2D1-201ENST00000373910 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
UBE2D1-201ENST00000373910 KIAA1210Q9ULL0 1709 aa20.4■□□□□ 0.86
UBE2D1-201ENST00000373910 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
UBE2D1-201ENST00000373910 TMEM132EQ6IEE7 984 aa20.4■□□□□ 0.86
UBE2D1-201ENST00000373910 ARHGAP31Q2M1Z3 1444 aa20.4■□□□□ 0.86
UBE2D1-201ENST00000373910 PPLO60437 1756 aa20.39■□□□□ 0.85
UBE2D1-201ENST00000373910 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
UBE2D1-201ENST00000373910 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
UBE2D1-201ENST00000373910 PIK3C2BO00750 1634 aa20.37■□□□□ 0.85
UBE2D1-201ENST00000373910 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
UBE2D1-201ENST00000373910 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
UBE2D1-201ENST00000373910 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
UBE2D1-201ENST00000373910 RALBP1Q15311 655 aa20.36■□□□□ 0.85
UBE2D1-201ENST00000373910 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
UBE2D1-201ENST00000373910 C14orf93Q9H972 538 aaKnown RBP20.35■□□□□ 0.85
UBE2D1-201ENST00000373910 KTN1Q86UP2 1357 aaKnown RBP20.35■□□□□ 0.85
UBE2D1-201ENST00000373910 RPGRIP1LQ68CZ1 1315 aa20.34■□□□□ 0.85
UBE2D1-201ENST00000373910 FANCIQ9NVI1 1328 aa20.34■□□□□ 0.85
UBE2D1-201ENST00000373910 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
UBE2D1-201ENST00000373910 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
UBE2D1-201ENST00000373910 SLC52A1Q9NWF4 448 aa20.33■□□□□ 0.84
UBE2D1-201ENST00000373910 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
UBE2D1-201ENST00000373910 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
UBE2D1-201ENST00000373910 MYO5BQ9ULV0 1848 aa20.31■□□□□ 0.84
UBE2D1-201ENST00000373910 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
UBE2D1-201ENST00000373910 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
UBE2D1-201ENST00000373910 CDCA8Q53HL2 280 aa20.3■□□□□ 0.84
UBE2D1-201ENST00000373910 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
UBE2D1-201ENST00000373910 AGLP35573 1532 aa20.29■□□□□ 0.84
UBE2D1-201ENST00000373910 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
UBE2D1-201ENST00000373910 REREQ9P2R6 1566 aa20.28■□□□□ 0.84
UBE2D1-201ENST00000373910 ADGRB1O14514 1584 aa20.28■□□□□ 0.84
UBE2D1-201ENST00000373910 BRD4O60885 1362 aaPredicted RBP20.28■□□□□ 0.84
UBE2D1-201ENST00000373910 CENPJQ9HC77 1338 aaPredicted RBP20.28■□□□□ 0.84
UBE2D1-201ENST00000373910 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.84
UBE2D1-201ENST00000373910 SETBP1Q9Y6X0 1596 aa20.27■□□□□ 0.84
UBE2D1-201ENST00000373910 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
UBE2D1-201ENST00000373910 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
UBE2D1-201ENST00000373910 TMEM131LA2VDJ0 1609 aa20.26■□□□□ 0.83
UBE2D1-201ENST00000373910 ARHGEF40Q8TER5 1519 aa20.25■□□□□ 0.83
UBE2D1-201ENST00000373910 MYOM1P52179 1685 aa20.25■□□□□ 0.83
UBE2D1-201ENST00000373910 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
UBE2D1-201ENST00000373910 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
UBE2D1-201ENST00000373910 STK26Q9P289 416 aa20.23■□□□□ 0.83
UBE2D1-201ENST00000373910 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
UBE2D1-201ENST00000373910 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
UBE2D1-201ENST00000373910 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
UBE2D1-201ENST00000373910 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
UBE2D1-201ENST00000373910 MYO3AQ8NEV4 1616 aa20.21■□□□□ 0.83
UBE2D1-201ENST00000373910 DEKP35659 375 aaKnown RBP20.2■□□□□ 0.82
UBE2D1-201ENST00000373910 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
UBE2D1-201ENST00000373910 ESF1Q9H501 851 aaKnown RBP20.19■□□□□ 0.82
UBE2D1-201ENST00000373910 QRICH2Q9H0J4 1663 aa20.19■□□□□ 0.82
UBE2D1-201ENST00000373910 CARD14Q9BXL6 1004 aa20.19■□□□□ 0.82
UBE2D1-201ENST00000373910 SBNO2Q9Y2G9 1366 aa20.18■□□□□ 0.82
UBE2D1-201ENST00000373910 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
UBE2D1-201ENST00000373910 ZMYM3Q14202 1370 aa20.17■□□□□ 0.82
UBE2D1-201ENST00000373910 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
UBE2D1-201ENST00000373910 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
UBE2D1-201ENST00000373910 SLC12A5Q9H2X9 1139 aa20.16■□□□□ 0.82
UBE2D1-201ENST00000373910 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
UBE2D1-201ENST00000373910 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
UBE2D1-201ENST00000373910 SPATA31D1Q6ZQQ2 1576 aa20.15■□□□□ 0.82
UBE2D1-201ENST00000373910 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
UBE2D1-201ENST00000373910 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
UBE2D1-201ENST00000373910 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
UBE2D1-201ENST00000373910 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
UBE2D1-201ENST00000373910 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
UBE2D1-201ENST00000373910 TULP4Q9NRJ4 1543 aa20.08■□□□□ 0.81
UBE2D1-201ENST00000373910 RIMS2Q9UQ26 1411 aa20.08■□□□□ 0.81
UBE2D1-201ENST00000373910 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
UBE2D1-201ENST00000373910 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
UBE2D1-201ENST00000373910 EVC2Q86UK5 1308 aa20.08■□□□□ 0.8
UBE2D1-201ENST00000373910 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.8
UBE2D1-201ENST00000373910 CEBPAP49715 358 aaPredicted RBP20.07■□□□□ 0.8
UBE2D1-201ENST00000373910 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms