RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ANKRD30BQ9BXX2 1392 aa29.74■■■□□ 2.35
SYNC-201ENST00000373484 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
SYNC-201ENST00000373484 LTKP29376 864 aa29.71■■■□□ 2.35
SYNC-201ENST00000373484 TXNDC2Q86VQ3 553 aa29.71■■■□□ 2.35
SYNC-201ENST00000373484 RIMS2Q9UQ26 1411 aa29.7■■■□□ 2.35
SYNC-201ENST00000373484 EID1Q9Y6B2 187 aa29.7■■■□□ 2.34
SYNC-201ENST00000373484 NPHP4O75161 1426 aaPredicted RBP29.68■■■□□ 2.34
SYNC-201ENST00000373484 DIEXFQ68CQ4 756 aaKnown RBP29.65■■■□□ 2.34
SYNC-201ENST00000373484 NEXMIFQ5QGS0 1516 aa29.65■■■□□ 2.34
SYNC-201ENST00000373484 SPATA31E1Q6ZUB1 1445 aa29.65■■■□□ 2.34
SYNC-201ENST00000373484 DHX57Q6P158 1386 aaKnown RBP29.64■■■□□ 2.34
SYNC-201ENST00000373484 CENPBP07199 599 aaPredicted RBP29.64■■■□□ 2.34
SYNC-201ENST00000373484 PPLO60437 1756 aa29.63■■■□□ 2.33
SYNC-201ENST00000373484 HDGFP51858 240 aaKnown RBP29.63■■■□□ 2.33
SYNC-201ENST00000373484 ZNF326Q5BKZ1 582 aaKnown RBP29.63■■■□□ 2.33
SYNC-201ENST00000373484 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.61■■■□□ 2.33
SYNC-201ENST00000373484 IFT172Q9UG01 1749 aa29.61■■■□□ 2.33
SYNC-201ENST00000373484 PLEKHG1Q9ULL1 1385 aa29.58■■■□□ 2.33
SYNC-201ENST00000373484 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
SYNC-201ENST00000373484 RPGRIP1LQ68CZ1 1315 aa29.56■■■□□ 2.32
SYNC-201ENST00000373484 NUTM2DQ5VT03 806 aaPredicted RBP29.56■■■□□ 2.32
SYNC-201ENST00000373484 RGL3Q3MIN7 710 aa29.53■■■□□ 2.32
SYNC-201ENST00000373484 NRXN3Q9Y4C0 1643 aa29.51■■■□□ 2.32
SYNC-201ENST00000373484 SETBP1Q9Y6X0 1596 aa29.5■■■□□ 2.31
SYNC-201ENST00000373484 DIP2AQ14689 1571 aa29.48■■■□□ 2.31
SYNC-201ENST00000373484 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
SYNC-201ENST00000373484 VGFO15240 615 aaPredicted RBP29.47■■■□□ 2.31
SYNC-201ENST00000373484 LTBP4Q8N2S1 1624 aa29.46■■■□□ 2.31
SYNC-201ENST00000373484 BCANQ96GW7 911 aa29.46■■■□□ 2.31
SYNC-201ENST00000373484 ADAMTS13Q76LX8 1427 aa29.46■■■□□ 2.31
SYNC-201ENST00000373484 STRCP1A6NGW2 1772 aa29.45■■■□□ 2.31
SYNC-201ENST00000373484 ZNF335Q9H4Z2 1342 aaPredicted RBP29.45■■■□□ 2.31
SYNC-201ENST00000373484 SLC26A8Q96RN1 970 aa29.45■■■□□ 2.3
SYNC-201ENST00000373484 SENP3Q9H4L4 574 aaPredicted RBP29.45■■■□□ 2.3
SYNC-201ENST00000373484 ZNF316A6NFI3 1004 aaPredicted RBP29.43■■■□□ 2.3
SYNC-201ENST00000373484 CHD2O14647 1828 aaKnown RBP29.41■■■□□ 2.3
SYNC-201ENST00000373484 MYOM2P54296 1465 aa29.41■■■□□ 2.3
SYNC-201ENST00000373484 SETD1AO15047 1707 aaKnown RBP29.41■■■□□ 2.3
SYNC-201ENST00000373484 TBX22Q9Y458 520 aa29.4■■■□□ 2.3
SYNC-201ENST00000373484 SIN3AQ96ST3 1273 aa29.39■■■□□ 2.3
SYNC-201ENST00000373484 ADGRF5Q8IZF2 1346 aa29.38■■■□□ 2.29
SYNC-201ENST00000373484 NWD1Q149M9 1564 aa29.37■■■□□ 2.29
SYNC-201ENST00000373484 NRXN1Q9ULB1 1477 aa29.36■■■□□ 2.29
SYNC-201ENST00000373484 ALKQ9UM73 1620 aa29.36■■■□□ 2.29
SYNC-201ENST00000373484 CPS1P31327 1500 aa29.36■■■□□ 2.29
SYNC-201ENST00000373484 PIK3C2GO75747 1445 aa29.35■■■□□ 2.29
SYNC-201ENST00000373484 PIK3R4Q99570 1358 aa29.33■■■□□ 2.29
SYNC-201ENST00000373484 DCAF11Q8TEB1 546 aa29.31■■■□□ 2.28
SYNC-201ENST00000373484 STAC3Q96MF2 364 aa29.31■■■□□ 2.28
SYNC-201ENST00000373484 KCNA6P17658 529 aa29.29■■■□□ 2.28
SYNC-201ENST00000373484 LAMC1P11047 1609 aa29.29■■■□□ 2.28
SYNC-201ENST00000373484 METP08581 1390 aa29.28■■■□□ 2.28
SYNC-201ENST00000373484 XRN1Q8IZH2 1706 aaKnown RBP29.27■■■□□ 2.28
SYNC-201ENST00000373484 NKTRP30414 1462 aaKnown RBP29.27■■■□□ 2.28
SYNC-201ENST00000373484 PTPRUQ92729 1446 aa29.26■■■□□ 2.27
SYNC-201ENST00000373484 CERKQ8TCT0 537 aa29.26■■■□□ 2.27
SYNC-201ENST00000373484 KDM2AQ9Y2K7 1162 aa29.26■■■□□ 2.27
SYNC-201ENST00000373484 XIRP1Q702N8 1843 aaKnown RBP29.25■■■□□ 2.27
SYNC-201ENST00000373484 LRRC7Q96NW7 1537 aa29.25■■■□□ 2.27
SYNC-201ENST00000373484 CLSPNQ9HAW4 1339 aa29.24■■■□□ 2.27
SYNC-201ENST00000373484 GTF3C3Q9Y5Q9 886 aa29.24■■■□□ 2.27
SYNC-201ENST00000373484 IQSEC2Q5JU85 1478 aa29.23■■■□□ 2.27
SYNC-201ENST00000373484 L3MBTL2Q969R5 705 aa29.22■■■□□ 2.27
SYNC-201ENST00000373484 ASXL1Q8IXJ9 1541 aa29.21■■■□□ 2.27
SYNC-201ENST00000373484 C14orf93Q9H972 538 aaKnown RBP29.2■■■□□ 2.27
SYNC-201ENST00000373484 AMOTL2Q9Y2J4 779 aa29.2■■■□□ 2.26
SYNC-201ENST00000373484 KIAA1210Q9ULL0 1709 aa29.18■■■□□ 2.26
SYNC-201ENST00000373484 CFAP70Q5T0N1 1121 aa29.17■■■□□ 2.26
SYNC-201ENST00000373484 MYT1Q01538 1121 aa29.16■■■□□ 2.26
SYNC-201ENST00000373484 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
SYNC-201ENST00000373484 TONSLQ96HA7 1378 aa29.15■■■□□ 2.26
SYNC-201ENST00000373484 KNDC1Q76NI1 1749 aa29.15■■■□□ 2.26
SYNC-201ENST00000373484 PROSER2Q86WR7 435 aaPredicted RBP29.13■■■□□ 2.25
SYNC-201ENST00000373484 ADGRB1O14514 1584 aa29.13■■■□□ 2.25
SYNC-201ENST00000373484 TMEM94Q12767 1356 aa29.12■■■□□ 2.25
SYNC-201ENST00000373484 TMEM132EQ6IEE7 984 aa29.11■■■□□ 2.25
SYNC-201ENST00000373484 PTCH1Q13635 1447 aa29.1■■■□□ 2.25
SYNC-201ENST00000373484 LRPPRCP42704 1394 aaKnown RBP29.09■■■□□ 2.25
SYNC-201ENST00000373484 YTHDC2Q9H6S0 1430 aaKnown RBP29.09■■■□□ 2.25
SYNC-201ENST00000373484 TECPR2O15040 1411 aa29.08■■■□□ 2.25
SYNC-201ENST00000373484 TRPM1Q7Z4N2 1603 aa29.07■■■□□ 2.24
SYNC-201ENST00000373484 NCOA3Q9Y6Q9 1424 aa29.07■■■□□ 2.24
SYNC-201ENST00000373484 RBM33Q96EV2 1170 aaKnown RBP29.07■■■□□ 2.24
SYNC-201ENST00000373484 ABCC11Q96J66 1382 aa29.05■■■□□ 2.24
SYNC-201ENST00000373484 ROBO2Q9HCK4 1378 aa29.05■■■□□ 2.24
SYNC-201ENST00000373484 STK26Q9P289 416 aa29.02■■■□□ 2.24
SYNC-201ENST00000373484 NALCNQ8IZF0 1738 aa29.02■■■□□ 2.24
SYNC-201ENST00000373484 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.01■■■□□ 2.23
SYNC-201ENST00000373484 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
SYNC-201ENST00000373484 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
SYNC-201ENST00000373484 NBPF8Q3BBV2 869 aa28.98■■■□□ 2.23
SYNC-201ENST00000373484 MSH6P52701 1360 aa28.98■■■□□ 2.23
SYNC-201ENST00000373484 ARHGEF28Q8N1W1 1705 aaKnown RBP28.97■■■□□ 2.23
SYNC-201ENST00000373484 FAM135BQ49AJ0 1406 aa28.97■■■□□ 2.23
SYNC-201ENST00000373484 NBPF1Q3BBV0 1214 aa28.97■■■□□ 2.23
SYNC-201ENST00000373484 ADGRL3Q9HAR2 1447 aa28.95■■■□□ 2.23
SYNC-201ENST00000373484 FBXO41Q8TF61 875 aa28.95■■■□□ 2.23
SYNC-201ENST00000373484 SIRT1Q96EB6 747 aa28.95■■■□□ 2.23
SYNC-201ENST00000373484 C14orf37Q86TY3 774 aa28.94■■■□□ 2.22
SYNC-201ENST00000373484 UBAP1LF5GYI3 381 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms