RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 TXNDC2Q86VQ3 553 aa26.83■■□□□ 1.89
PBX3-202ENST00000373482 RIMS2Q9UQ26 1411 aa26.82■■□□□ 1.88
PBX3-202ENST00000373482 MED14O60244 1454 aa26.82■■□□□ 1.88
PBX3-202ENST00000373482 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
PBX3-202ENST00000373482 IFT172Q9UG01 1749 aa26.81■■□□□ 1.88
PBX3-202ENST00000373482 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.8■■□□□ 1.88
PBX3-202ENST00000373482 DHX57Q6P158 1386 aaKnown RBP26.8■■□□□ 1.88
PBX3-202ENST00000373482 NPHP4O75161 1426 aaPredicted RBP26.8■■□□□ 1.88
PBX3-202ENST00000373482 LTKP29376 864 aa26.79■■□□□ 1.88
PBX3-202ENST00000373482 NEXMIFQ5QGS0 1516 aa26.79■■□□□ 1.88
PBX3-202ENST00000373482 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
PBX3-202ENST00000373482 SPATA31E1Q6ZUB1 1445 aa26.74■■□□□ 1.87
PBX3-202ENST00000373482 RPGRIP1LQ68CZ1 1315 aa26.73■■□□□ 1.87
PBX3-202ENST00000373482 RGL3Q3MIN7 710 aa26.71■■□□□ 1.87
PBX3-202ENST00000373482 PLEKHG1Q9ULL1 1385 aa26.71■■□□□ 1.87
PBX3-202ENST00000373482 NUTM2DQ5VT03 806 aaPredicted RBP26.7■■□□□ 1.86
PBX3-202ENST00000373482 BCANQ96GW7 911 aa26.7■■□□□ 1.86
PBX3-202ENST00000373482 VGFO15240 615 aaPredicted RBP26.66■■□□□ 1.86
PBX3-202ENST00000373482 DIP2AQ14689 1571 aa26.66■■□□□ 1.86
PBX3-202ENST00000373482 NRXN3Q9Y4C0 1643 aa26.65■■□□□ 1.86
PBX3-202ENST00000373482 SETBP1Q9Y6X0 1596 aa26.64■■□□□ 1.86
PBX3-202ENST00000373482 CHD2O14647 1828 aaKnown RBP26.63■■□□□ 1.85
PBX3-202ENST00000373482 SENP3Q9H4L4 574 aaPredicted RBP26.61■■□□□ 1.85
PBX3-202ENST00000373482 STRCP1A6NGW2 1772 aa26.6■■□□□ 1.85
PBX3-202ENST00000373482 SLC26A8Q96RN1 970 aa26.59■■□□□ 1.85
PBX3-202ENST00000373482 MYOM2P54296 1465 aa26.58■■□□□ 1.85
PBX3-202ENST00000373482 SETD1AO15047 1707 aaKnown RBP26.58■■□□□ 1.85
PBX3-202ENST00000373482 SIN3AQ96ST3 1273 aa26.56■■□□□ 1.84
PBX3-202ENST00000373482 ADAMTS13Q76LX8 1427 aa26.56■■□□□ 1.84
PBX3-202ENST00000373482 LAMC1P11047 1609 aa26.55■■□□□ 1.84
PBX3-202ENST00000373482 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
PBX3-202ENST00000373482 TBX22Q9Y458 520 aa26.55■■□□□ 1.84
PBX3-202ENST00000373482 ZNF335Q9H4Z2 1342 aaPredicted RBP26.55■■□□□ 1.84
PBX3-202ENST00000373482 LTBP4Q8N2S1 1624 aa26.54■■□□□ 1.84
PBX3-202ENST00000373482 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
PBX3-202ENST00000373482 DCAF11Q8TEB1 546 aa26.53■■□□□ 1.84
PBX3-202ENST00000373482 STAC3Q96MF2 364 aa26.53■■□□□ 1.84
PBX3-202ENST00000373482 CPS1P31327 1500 aa26.52■■□□□ 1.84
PBX3-202ENST00000373482 ADGRF5Q8IZF2 1346 aa26.52■■□□□ 1.84
PBX3-202ENST00000373482 NWD1Q149M9 1564 aa26.5■■□□□ 1.83
PBX3-202ENST00000373482 NRXN1Q9ULB1 1477 aa26.49■■□□□ 1.83
PBX3-202ENST00000373482 PIK3C2GO75747 1445 aa26.49■■□□□ 1.83
PBX3-202ENST00000373482 PIK3R4Q99570 1358 aa26.49■■□□□ 1.83
PBX3-202ENST00000373482 KDM2AQ9Y2K7 1162 aa26.49■■□□□ 1.83
PBX3-202ENST00000373482 CLSPNQ9HAW4 1339 aa26.48■■□□□ 1.83
PBX3-202ENST00000373482 CCER1Q8TC90 406 aaPredicted RBP26.46■■□□□ 1.83
PBX3-202ENST00000373482 XIRP1Q702N8 1843 aaKnown RBP26.46■■□□□ 1.83
PBX3-202ENST00000373482 KCNA6P17658 529 aa26.45■■□□□ 1.82
PBX3-202ENST00000373482 XRN1Q8IZH2 1706 aaKnown RBP26.45■■□□□ 1.82
PBX3-202ENST00000373482 KIAA1210Q9ULL0 1709 aa26.45■■□□□ 1.82
PBX3-202ENST00000373482 TONSLQ96HA7 1378 aa26.43■■□□□ 1.82
PBX3-202ENST00000373482 NKTRP30414 1462 aaKnown RBP26.42■■□□□ 1.82
PBX3-202ENST00000373482 L3MBTL2Q969R5 705 aa26.41■■□□□ 1.82
PBX3-202ENST00000373482 METP08581 1390 aa26.41■■□□□ 1.82
PBX3-202ENST00000373482 KNDC1Q76NI1 1749 aa26.39■■□□□ 1.82
PBX3-202ENST00000373482 CERKQ8TCT0 537 aa26.39■■□□□ 1.82
PBX3-202ENST00000373482 IQSEC2Q5JU85 1478 aa26.38■■□□□ 1.81
PBX3-202ENST00000373482 PTPRUQ92729 1446 aa26.38■■□□□ 1.81
PBX3-202ENST00000373482 C14orf93Q9H972 538 aaKnown RBP26.37■■□□□ 1.81
PBX3-202ENST00000373482 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
PBX3-202ENST00000373482 LRRC7Q96NW7 1537 aa26.37■■□□□ 1.81
PBX3-202ENST00000373482 PRAG1Q86YV5 1406 aa26.35■■□□□ 1.81
PBX3-202ENST00000373482 ASXL1Q8IXJ9 1541 aa26.34■■□□□ 1.81
PBX3-202ENST00000373482 CFAP70Q5T0N1 1121 aa26.34■■□□□ 1.81
PBX3-202ENST00000373482 TRPM1Q7Z4N2 1603 aa26.33■■□□□ 1.81
PBX3-202ENST00000373482 PROSER2Q86WR7 435 aaPredicted RBP26.33■■□□□ 1.81
PBX3-202ENST00000373482 TMEM132EQ6IEE7 984 aa26.29■■□□□ 1.8
PBX3-202ENST00000373482 ADGRB1O14514 1584 aa26.29■■□□□ 1.8
PBX3-202ENST00000373482 YTHDC2Q9H6S0 1430 aaKnown RBP26.28■■□□□ 1.8
PBX3-202ENST00000373482 LRPPRCP42704 1394 aaKnown RBP26.27■■□□□ 1.8
PBX3-202ENST00000373482 TMEM94Q12767 1356 aa26.27■■□□□ 1.8
PBX3-202ENST00000373482 PTCH1Q13635 1447 aa26.27■■□□□ 1.8
PBX3-202ENST00000373482 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
PBX3-202ENST00000373482 NCOA3Q9Y6Q9 1424 aa26.25■■□□□ 1.79
PBX3-202ENST00000373482 STK26Q9P289 416 aa26.25■■□□□ 1.79
PBX3-202ENST00000373482 NALCNQ8IZF0 1738 aa26.25■■□□□ 1.79
PBX3-202ENST00000373482 ARHGEF28Q8N1W1 1705 aaKnown RBP26.24■■□□□ 1.79
PBX3-202ENST00000373482 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.24■■□□□ 1.79
PBX3-202ENST00000373482 TECPR2O15040 1411 aa26.23■■□□□ 1.79
PBX3-202ENST00000373482 ABCC11Q96J66 1382 aa26.23■■□□□ 1.79
PBX3-202ENST00000373482 RBM33Q96EV2 1170 aaKnown RBP26.22■■□□□ 1.79
PBX3-202ENST00000373482 C14orf37Q86TY3 774 aa26.21■■□□□ 1.79
PBX3-202ENST00000373482 DLC1Q96QB1 1528 aa26.2■■□□□ 1.79
PBX3-202ENST00000373482 MSH6P52701 1360 aa26.2■■□□□ 1.78
PBX3-202ENST00000373482 ROBO2Q9HCK4 1378 aa26.2■■□□□ 1.78
PBX3-202ENST00000373482 FAM135BQ49AJ0 1406 aa26.16■■□□□ 1.78
PBX3-202ENST00000373482 NBPF1Q3BBV0 1214 aa26.16■■□□□ 1.78
PBX3-202ENST00000373482 NBPF8Q3BBV2 869 aa26.16■■□□□ 1.78
PBX3-202ENST00000373482 TOM1O60784 492 aa26.15■■□□□ 1.78
PBX3-202ENST00000373482 SIRT1Q96EB6 747 aa26.15■■□□□ 1.78
PBX3-202ENST00000373482 TRAK1Q9UPV9 953 aa26.15■■□□□ 1.78
PBX3-202ENST00000373482 ROCK2O75116 1388 aaKnown RBP26.15■■□□□ 1.78
PBX3-202ENST00000373482 ADGRL3Q9HAR2 1447 aa26.14■■□□□ 1.77
PBX3-202ENST00000373482 RALGAPBQ86X10 1494 aa26.13■■□□□ 1.77
PBX3-202ENST00000373482 UBAP1LF5GYI3 381 aa26.13■■□□□ 1.77
PBX3-202ENST00000373482 C19orf44Q9H6X5 657 aa26.12■■□□□ 1.77
PBX3-202ENST00000373482 DCCP43146 1447 aa26.11■■□□□ 1.77
PBX3-202ENST00000373482 WAPLQ7Z5K2 1190 aa26.1■■□□□ 1.77
PBX3-202ENST00000373482 POGKQ9P215 609 aa26.1■■□□□ 1.77
PBX3-202ENST00000373482 FBXO41Q8TF61 875 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms