RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 FOXD1Q16676 465 aa31.76■■■□□ 2.67
TMEM54-202ENST00000373463 MPHOSPH9Q99550 1183 aa31.74■■■□□ 2.67
TMEM54-202ENST00000373463 IQSEC2Q5JU85 1478 aa31.73■■■□□ 2.67
TMEM54-202ENST00000373463 CPS1P31327 1500 aa31.71■■■□□ 2.67
TMEM54-202ENST00000373463 KIF1BO60333 1816 aa31.7■■■□□ 2.66
TMEM54-202ENST00000373463 PLEKHG1Q9ULL1 1385 aa31.68■■■□□ 2.66
TMEM54-202ENST00000373463 NUTM2DQ5VT03 806 aaPredicted RBP31.67■■■□□ 2.66
TMEM54-202ENST00000373463 SLC26A8Q96RN1 970 aa31.66■■■□□ 2.66
TMEM54-202ENST00000373463 SENP3Q9H4L4 574 aaPredicted RBP31.65■■■□□ 2.66
TMEM54-202ENST00000373463 NEXMIFQ5QGS0 1516 aa31.64■■■□□ 2.66
TMEM54-202ENST00000373463 ACIN1Q9UKV3 1341 aaKnown RBP31.63■■■□□ 2.65
TMEM54-202ENST00000373463 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.62■■■□□ 2.65
TMEM54-202ENST00000373463 LRRC7Q96NW7 1537 aa31.61■■■□□ 2.65
TMEM54-202ENST00000373463 ADAMTS13Q76LX8 1427 aa31.61■■■□□ 2.65
TMEM54-202ENST00000373463 PPP1R15AO75807 674 aaPredicted RBP31.61■■■□□ 2.65
TMEM54-202ENST00000373463 HDGFP51858 240 aaKnown RBP31.6■■■□□ 2.65
TMEM54-202ENST00000373463 NRXN3Q9Y4C0 1643 aa31.6■■■□□ 2.65
TMEM54-202ENST00000373463 NWD1Q149M9 1564 aa31.57■■■□□ 2.64
TMEM54-202ENST00000373463 HRCP23327 699 aa31.57■■■□□ 2.64
TMEM54-202ENST00000373463 XIRP1Q702N8 1843 aaKnown RBP31.56■■■□□ 2.64
TMEM54-202ENST00000373463 ZNF326Q5BKZ1 582 aaKnown RBP31.56■■■□□ 2.64
TMEM54-202ENST00000373463 CHD2O14647 1828 aaKnown RBP31.54■■■□□ 2.64
TMEM54-202ENST00000373463 BCANQ96GW7 911 aa31.54■■■□□ 2.64
TMEM54-202ENST00000373463 CCDC144AA2RUR9 1427 aa31.54■■■□□ 2.64
TMEM54-202ENST00000373463 SETBP1Q9Y6X0 1596 aa31.53■■■□□ 2.64
TMEM54-202ENST00000373463 DIP2AQ14689 1571 aa31.52■■■□□ 2.64
TMEM54-202ENST00000373463 SPATA31E1Q6ZUB1 1445 aa31.52■■■□□ 2.64
TMEM54-202ENST00000373463 PPLO60437 1756 aa31.51■■■□□ 2.64
TMEM54-202ENST00000373463 ALKQ9UM73 1620 aa31.51■■■□□ 2.63
TMEM54-202ENST00000373463 TBX22Q9Y458 520 aa31.51■■■□□ 2.63
TMEM54-202ENST00000373463 KCNA6P17658 529 aa31.5■■■□□ 2.63
TMEM54-202ENST00000373463 NKTRP30414 1462 aaKnown RBP31.46■■■□□ 2.63
TMEM54-202ENST00000373463 IFT172Q9UG01 1749 aa31.45■■■□□ 2.63
TMEM54-202ENST00000373463 UBAP1LF5GYI3 381 aa31.44■■■□□ 2.62
TMEM54-202ENST00000373463 ANKRD30BQ9BXX2 1392 aa31.43■■■□□ 2.62
TMEM54-202ENST00000373463 PTPRUQ92729 1446 aa31.43■■■□□ 2.62
TMEM54-202ENST00000373463 SETD1AO15047 1707 aaKnown RBP31.42■■■□□ 2.62
TMEM54-202ENST00000373463 RPGRIP1LQ68CZ1 1315 aa31.42■■■□□ 2.62
TMEM54-202ENST00000373463 TMEM94Q12767 1356 aa31.41■■■□□ 2.62
TMEM54-202ENST00000373463 PIK3R4Q99570 1358 aa31.4■■■□□ 2.62
TMEM54-202ENST00000373463 RBM33Q96EV2 1170 aaKnown RBP31.38■■■□□ 2.61
TMEM54-202ENST00000373463 METP08581 1390 aa31.38■■■□□ 2.61
TMEM54-202ENST00000373463 XRN1Q8IZH2 1706 aaKnown RBP31.38■■■□□ 2.61
TMEM54-202ENST00000373463 RGL3Q3MIN7 710 aa31.37■■■□□ 2.61
TMEM54-202ENST00000373463 VGFO15240 615 aaPredicted RBP31.36■■■□□ 2.61
TMEM54-202ENST00000373463 PROSER2Q86WR7 435 aaPredicted RBP31.35■■■□□ 2.61
TMEM54-202ENST00000373463 ADGRF5Q8IZF2 1346 aa31.32■■■□□ 2.6
TMEM54-202ENST00000373463 TOM1O60784 492 aa31.3■■■□□ 2.6
TMEM54-202ENST00000373463 AMOTL2Q9Y2J4 779 aa31.3■■■□□ 2.6
TMEM54-202ENST00000373463 PIP4K2BP78356 416 aa31.26■■■□□ 2.59
TMEM54-202ENST00000373463 PIK3C2GO75747 1445 aa31.23■■■□□ 2.59
TMEM54-202ENST00000373463 NRXN1Q9ULB1 1477 aa31.22■■■□□ 2.59
TMEM54-202ENST00000373463 TRIM26Q12899 539 aaPredicted RBP31.22■■■□□ 2.59
TMEM54-202ENST00000373463 MYOM2P54296 1465 aa31.21■■■□□ 2.59
TMEM54-202ENST00000373463 ASXL1Q8IXJ9 1541 aa31.21■■■□□ 2.59
TMEM54-202ENST00000373463 NCOA3Q9Y6Q9 1424 aa31.2■■■□□ 2.59
TMEM54-202ENST00000373463 SCAF1Q9H7N4 1312 aaKnown RBP31.2■■■□□ 2.58
TMEM54-202ENST00000373463 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.18■■■□□ 2.58
TMEM54-202ENST00000373463 PRAG1Q86YV5 1406 aa31.17■■■□□ 2.58
TMEM54-202ENST00000373463 MSH6P52701 1360 aa31.17■■■□□ 2.58
TMEM54-202ENST00000373463 DHX57Q6P158 1386 aaKnown RBP31.14■■■□□ 2.58
TMEM54-202ENST00000373463 ROBO2Q9HCK4 1378 aa31.13■■■□□ 2.57
TMEM54-202ENST00000373463 PTCH1Q13635 1447 aa31.13■■■□□ 2.57
TMEM54-202ENST00000373463 HSPA1LP34931 641 aa31.12■■■□□ 2.57
TMEM54-202ENST00000373463 NALCNQ8IZF0 1738 aa31.11■■■□□ 2.57
TMEM54-202ENST00000373463 C19orf44Q9H6X5 657 aa31.08■■■□□ 2.57
TMEM54-202ENST00000373463 ROBO1Q9Y6N7 1651 aa31.08■■■□□ 2.57
TMEM54-202ENST00000373463 FAM135BQ49AJ0 1406 aa31.07■■■□□ 2.57
TMEM54-202ENST00000373463 LAMC1P11047 1609 aa31.07■■■□□ 2.56
TMEM54-202ENST00000373463 TMEM132EQ6IEE7 984 aa31.07■■■□□ 2.56
TMEM54-202ENST00000373463 C14orf93Q9H972 538 aaKnown RBP31.07■■■□□ 2.56
TMEM54-202ENST00000373463 C14orf37Q86TY3 774 aa31.06■■■□□ 2.56
TMEM54-202ENST00000373463 ADGRL3Q9HAR2 1447 aa31.06■■■□□ 2.56
TMEM54-202ENST00000373463 KNDC1Q76NI1 1749 aa31.05■■■□□ 2.56
TMEM54-202ENST00000373463 CFAP70Q5T0N1 1121 aa31.05■■■□□ 2.56
TMEM54-202ENST00000373463 TECPR2O15040 1411 aa31.05■■■□□ 2.56
TMEM54-202ENST00000373463 DCAF11Q8TEB1 546 aa31.04■■■□□ 2.56
TMEM54-202ENST00000373463 LRPPRCP42704 1394 aaKnown RBP31.04■■■□□ 2.56
TMEM54-202ENST00000373463 SLAIN2Q9P270 581 aa31.03■■■□□ 2.56
TMEM54-202ENST00000373463 DCCP43146 1447 aa31.03■■■□□ 2.56
TMEM54-202ENST00000373463 KDM2AQ9Y2K7 1162 aa31.02■■■□□ 2.56
TMEM54-202ENST00000373463 YTHDC2Q9H6S0 1430 aaKnown RBP31■■■□□ 2.55
TMEM54-202ENST00000373463 ABCC11Q96J66 1382 aa31■■■□□ 2.55
TMEM54-202ENST00000373463 ADGRB1O14514 1584 aa31■■■□□ 2.55
TMEM54-202ENST00000373463 CADPS2Q86UW7 1296 aa30.98■■■□□ 2.55
TMEM54-202ENST00000373463 STK26Q9P289 416 aa30.98■■■□□ 2.55
TMEM54-202ENST00000373463 SIN3AQ96ST3 1273 aa30.97■■■□□ 2.55
TMEM54-202ENST00000373463 ATF3P18847 181 aa30.96■■■□□ 2.55
TMEM54-202ENST00000373463 MST1RQ04912 1400 aa30.96■■■□□ 2.55
TMEM54-202ENST00000373463 PLEKHH1Q9ULM0 1364 aa30.94■■■□□ 2.54
TMEM54-202ENST00000373463 STAC3Q96MF2 364 aa30.94■■■□□ 2.54
TMEM54-202ENST00000373463 WAPLQ7Z5K2 1190 aa30.92■■■□□ 2.54
TMEM54-202ENST00000373463 CDC42BPGQ6DT37 1551 aa30.87■■■□□ 2.53
TMEM54-202ENST00000373463 BRINP3Q76B58 766 aa30.86■■■□□ 2.53
TMEM54-202ENST00000373463 DLC1Q96QB1 1528 aa30.86■■■□□ 2.53
TMEM54-202ENST00000373463 PHLPP1O60346 1717 aa30.86■■■□□ 2.53
TMEM54-202ENST00000373463 L3MBTL2Q969R5 705 aa30.85■■■□□ 2.53
TMEM54-202ENST00000373463 COL16A1Q07092 1604 aaPredicted RBP30.84■■■□□ 2.53
TMEM54-202ENST00000373463 AHDC1Q5TGY3 1603 aaPredicted RBP30.84■■■□□ 2.53
TMEM54-202ENST00000373463 SIRT1Q96EB6 747 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms