RNA–Protein interactions for RNA: ENST00000373187.5

PTPRT-203, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRT, Length 12,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-203ENST00000373187 SYNJ2O15056 1496 aa7.36□□□□□ -1.23
PTPRT-203ENST00000373187 ARHGAP5Q13017 1502 aa7.36□□□□□ -1.23
PTPRT-203ENST00000373187 JPH4Q96JJ6 628 aa7.36□□□□□ -1.23
PTPRT-203ENST00000373187 DHX8Q14562 1220 aaKnown RBP7.36□□□□□ -1.23
PTPRT-203ENST00000373187 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-203ENST00000373187 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-203ENST00000373187 DHX57Q6P158 1386 aaKnown RBP7.35□□□□□ -1.23
PTPRT-203ENST00000373187 ERC2O15083 957 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 HFM1A2PYH4 1435 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 FOXD1Q16676 465 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 CCDC7Q96M83 1385 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 MARCH6O60337 910 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 FAM184AQ8NB25 1140 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 SPRYD3Q8NCJ5 442 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 TEFQ10587 303 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
PTPRT-203ENST00000373187 KIF7Q2M1P5 1343 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 BECN2A8MW95 431 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 TRIM29Q14134 588 aa7.35□□□□□ -1.23
PTPRT-203ENST00000373187 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
PTPRT-203ENST00000373187 SLC4A10Q6U841 1118 aa7.34□□□□□ -1.23
PTPRT-203ENST00000373187 GRIN2BQ13224 1484 aa7.34□□□□□ -1.23
PTPRT-203ENST00000373187 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.23
PTPRT-203ENST00000373187 DAPK1P53355 1430 aa7.34□□□□□ -1.23
PTPRT-203ENST00000373187 GNAI1P63096 354 aa7.34□□□□□ -1.23
PTPRT-203ENST00000373187 LRRC9Q6ZRR7 1453 aa7.34□□□□□ -1.23
PTPRT-203ENST00000373187 RRP1P56182 461 aaKnown RBP7.34□□□□□ -1.24
PTPRT-203ENST00000373187 C9orf78Q9NZ63 289 aaPredicted RBP7.34□□□□□ -1.24
PTPRT-203ENST00000373187 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 HNRNPMP52272 730 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRT-203ENST00000373187 TOMM22Q9NS69 142 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 CPLX1O14810 134 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 TRDNQ13061 729 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 ST20-MTHFSA0A0A6YYL1 179 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 CDR1P51861 262 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRT-203ENST00000373187 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
PTPRT-203ENST00000373187 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
PTPRT-203ENST00000373187 NAT10Q9H0A0 1025 aaKnown RBP7.33□□□□□ -1.24
PTPRT-203ENST00000373187 PANK3Q9H999 370 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 NCAPD3P42695 1498 aa7.33□□□□□ -1.24
PTPRT-203ENST00000373187 NUCB2P80303 420 aa7.32□□□□□ -1.24
PTPRT-203ENST00000373187 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
PTPRT-203ENST00000373187 INTS3Q68E01 1043 aaKnown RBP7.32□□□□□ -1.24
PTPRT-203ENST00000373187 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
PTPRT-203ENST00000373187 PRKRIP1Q9H875 184 aaPredicted RBP7.32□□□□□ -1.24
PTPRT-203ENST00000373187 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
PTPRT-203ENST00000373187 IFIT2P09913 472 aaKnown RBP7.32□□□□□ -1.24
PTPRT-203ENST00000373187 NCOA2Q15596 1464 aa7.32□□□□□ -1.24
PTPRT-203ENST00000373187 CT47B1P0C2W7 299 aaPredicted RBP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 SENP3-EIF4A1A0A087X0R7 540 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 ERICH2A1L162 156 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 SAFBQ15424 915 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 TEX35Q5T0J7 233 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 CCDC141Q6ZP82 1450 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 HIP1O00291 1037 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 DZIP1LQ8IYY4 767 aaKnown RBP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 MTERF4Q7Z6M4 381 aaKnown RBP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 PDIA4P13667 645 aaKnown RBP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 CCP110O43303 1012 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 RUNDC1Q96C34 613 aa7.31□□□□□ -1.24
PTPRT-203ENST00000373187 GZF1Q9H116 711 aaPredicted RBP7.31□□□□□ -1.24
PTPRT-203ENST00000373187 VPS37DQ86XT2 251 aa7.3□□□□□ -1.24
PTPRT-203ENST00000373187 G3BP1Q13283 466 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTPRT-203ENST00000373187 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-203ENST00000373187 OSCARQ8IYS5 282 aa7.3□□□□□ -1.24
PTPRT-203ENST00000373187 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
PTPRT-203ENST00000373187 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
PTPRT-203ENST00000373187 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-203ENST00000373187 XBP1P17861 261 aa7.3□□□□□ -1.24
PTPRT-203ENST00000373187 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
PTPRT-203ENST00000373187 CTDP1Q9Y5B0 961 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-203ENST00000373187 MYO6Q9UM54 1294 aa7.3□□□□□ -1.24
PTPRT-203ENST00000373187 MCM2P49736 904 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 DDX49Q9Y6V7 483 aaKnown RBP7.29□□□□□ -1.24
PTPRT-203ENST00000373187 PDCP20941 246 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
PTPRT-203ENST00000373187 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
PTPRT-203ENST00000373187 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 DHX16O60231 1041 aaKnown RBP7.29□□□□□ -1.24
PTPRT-203ENST00000373187 CLUAP1Q96AJ1 413 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 CCDC43Q96MW1 224 aaKnown RBP7.29□□□□□ -1.24
PTPRT-203ENST00000373187 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.29□□□□□ -1.24
PTPRT-203ENST00000373187 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 ANKRD45Q5TZF3 282 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 CCDC73Q6ZRK6 1079 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 GPRASP1Q5JY77 1395 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 PSMA5P28066 241 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 TRAK1Q9UPV9 953 aa7.29□□□□□ -1.24
PTPRT-203ENST00000373187 TIAM1Q13009 1591 aa7.28□□□□□ -1.24
PTPRT-203ENST00000373187 LETM1O95202 739 aaPredicted RBP7.28□□□□□ -1.24
PTPRT-203ENST00000373187 EVA1CP58658 441 aa7.28□□□□□ -1.24
PTPRT-203ENST00000373187 RILPL2Q969X0 211 aa7.28□□□□□ -1.24
PTPRT-203ENST00000373187 AK7Q96M32 723 aa7.28□□□□□ -1.24
PTPRT-203ENST00000373187 GSE1Q14687 1217 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms