RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 NFKBIBQ15653 356 aa23.58■■□□□ 1.37
HNF4A-203ENST00000372920 SLFN5Q08AF3 891 aa23.58■■□□□ 1.37
HNF4A-203ENST00000372920 DAXXQ9UER7 740 aaPredicted RBP23.57■■□□□ 1.36
HNF4A-203ENST00000372920 RTN4Q9NQC3 1192 aaKnown RBP23.56■■□□□ 1.36
HNF4A-203ENST00000372920 MADDQ8WXG6 1647 aa23.55■■□□□ 1.36
HNF4A-203ENST00000372920 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
HNF4A-203ENST00000372920 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
HNF4A-203ENST00000372920 IQGAP1P46940 1657 aa23.55■■□□□ 1.36
HNF4A-203ENST00000372920 SYNMO15061 1565 aa23.55■■□□□ 1.36
HNF4A-203ENST00000372920 PIK3C2GO75747 1445 aa23.54■■□□□ 1.36
HNF4A-203ENST00000372920 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
HNF4A-203ENST00000372920 GSE1Q14687 1217 aa23.54■■□□□ 1.36
HNF4A-203ENST00000372920 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
HNF4A-203ENST00000372920 TRMT2AQ8IZ69 625 aaKnown RBP23.53■■□□□ 1.36
HNF4A-203ENST00000372920 RGS3P49796 1198 aa23.52■■□□□ 1.36
HNF4A-203ENST00000372920 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
HNF4A-203ENST00000372920 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
HNF4A-203ENST00000372920 ANO8Q9HCE9 1232 aaPredicted RBP23.49■■□□□ 1.35
HNF4A-203ENST00000372920 APAF1O14727 1248 aa23.48■■□□□ 1.35
HNF4A-203ENST00000372920 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
HNF4A-203ENST00000372920 SCAPERQ9BY12 1400 aa23.47■■□□□ 1.35
HNF4A-203ENST00000372920 NKTRP30414 1462 aaKnown RBP23.47■■□□□ 1.35
HNF4A-203ENST00000372920 EIF3AQ14152 1382 aaKnown RBP23.47■■□□□ 1.35
HNF4A-203ENST00000372920 BCAR3O75815 825 aa23.46■■□□□ 1.35
HNF4A-203ENST00000372920 ABCC2Q92887 1545 aa23.45■■□□□ 1.34
HNF4A-203ENST00000372920 MYOM1P52179 1685 aa23.44■■□□□ 1.34
HNF4A-203ENST00000372920 FRAT1Q92837 279 aaPredicted RBP23.44■■□□□ 1.34
HNF4A-203ENST00000372920 BRPF3Q9ULD4 1205 aa23.44■■□□□ 1.34
HNF4A-203ENST00000372920 TRPM2O94759 1503 aa23.44■■□□□ 1.34
HNF4A-203ENST00000372920 SPHKAPQ2M3C7 1700 aa23.43■■□□□ 1.34
HNF4A-203ENST00000372920 PLCH2O75038 1416 aa23.43■■□□□ 1.34
HNF4A-203ENST00000372920 E9PSI1 815 aa23.42■■□□□ 1.34
HNF4A-203ENST00000372920 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
HNF4A-203ENST00000372920 TRAPPC8Q9Y2L5 1435 aa23.42■■□□□ 1.34
HNF4A-203ENST00000372920 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
HNF4A-203ENST00000372920 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
HNF4A-203ENST00000372920 IGHDP01880 384 aa23.4■■□□□ 1.34
HNF4A-203ENST00000372920 PTPRTO14522 1441 aa23.4■■□□□ 1.34
HNF4A-203ENST00000372920 FRAT2O75474 233 aaPredicted RBP23.39■■□□□ 1.33
HNF4A-203ENST00000372920 ABCC1P33527 1531 aa23.38■■□□□ 1.33
HNF4A-203ENST00000372920 CLTCL1P53675 1640 aa23.38■■□□□ 1.33
HNF4A-203ENST00000372920 CEP152O94986 1710 aa23.38■■□□□ 1.33
HNF4A-203ENST00000372920 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
HNF4A-203ENST00000372920 SPAG9O60271 1321 aaKnown RBP23.35■■□□□ 1.33
HNF4A-203ENST00000372920 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
HNF4A-203ENST00000372920 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
HNF4A-203ENST00000372920 PDE3AQ14432 1141 aa23.33■■□□□ 1.33
HNF4A-203ENST00000372920 USP19O94966 1318 aa23.33■■□□□ 1.33
HNF4A-203ENST00000372920 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
HNF4A-203ENST00000372920 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.32
HNF4A-203ENST00000372920 NGEFQ8N5V2 710 aa23.33■■□□□ 1.32
HNF4A-203ENST00000372920 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
HNF4A-203ENST00000372920 CENPJQ9HC77 1338 aaPredicted RBP23.32■■□□□ 1.32
HNF4A-203ENST00000372920 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
HNF4A-203ENST00000372920 CLUAP1Q96AJ1 413 aa23.31■■□□□ 1.32
HNF4A-203ENST00000372920 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
HNF4A-203ENST00000372920 PANK1Q8TE04 598 aa23.3■■□□□ 1.32
HNF4A-203ENST00000372920 COG6Q9Y2V7 657 aa23.3■■□□□ 1.32
HNF4A-203ENST00000372920 CHD1O14646 1710 aa23.29■■□□□ 1.32
HNF4A-203ENST00000372920 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
HNF4A-203ENST00000372920 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
HNF4A-203ENST00000372920 NINLQ9Y2I6 1382 aa23.28■■□□□ 1.32
HNF4A-203ENST00000372920 RTEL1-TNFRSF6BF6WH68 1400 aa23.28■■□□□ 1.32
HNF4A-203ENST00000372920 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
HNF4A-203ENST00000372920 SEC24BO95487 1268 aa23.28■■□□□ 1.32
HNF4A-203ENST00000372920 MAPK8IP3Q9UPT6 1336 aa23.28■■□□□ 1.32
HNF4A-203ENST00000372920 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
HNF4A-203ENST00000372920 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
HNF4A-203ENST00000372920 TET3O43151 1660 aa23.26■■□□□ 1.31
HNF4A-203ENST00000372920 POLR3AO14802 1390 aaPredicted RBP23.25■■□□□ 1.31
HNF4A-203ENST00000372920 DEPDC5O75140 1603 aa23.25■■□□□ 1.31
HNF4A-203ENST00000372920 VIRMAQ69YN4 1812 aaKnown RBP23.25■■□□□ 1.31
HNF4A-203ENST00000372920 ADGRF5Q8IZF2 1346 aa23.25■■□□□ 1.31
HNF4A-203ENST00000372920 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
HNF4A-203ENST00000372920 KANK1Q14678 1352 aa23.23■■□□□ 1.31
HNF4A-203ENST00000372920 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
HNF4A-203ENST00000372920 MAP3K4Q9Y6R4 1608 aa23.21■■□□□ 1.31
HNF4A-203ENST00000372920 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.21■■□□□ 1.31
HNF4A-203ENST00000372920 MYOM2P54296 1465 aa23.21■■□□□ 1.31
HNF4A-203ENST00000372920 NEUROD2Q15784 382 aa23.2■■□□□ 1.3
HNF4A-203ENST00000372920 NEURL4Q96JN8 1562 aa23.2■■□□□ 1.3
HNF4A-203ENST00000372920 UGGT1Q9NYU2 1555 aa23.2■■□□□ 1.3
HNF4A-203ENST00000372920 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
HNF4A-203ENST00000372920 BECN1Q14457 450 aa23.2■■□□□ 1.3
HNF4A-203ENST00000372920 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
HNF4A-203ENST00000372920 VWDEQ8N2E2 1590 aa23.19■■□□□ 1.3
HNF4A-203ENST00000372920 NLRP1Q9C000 1473 aa23.19■■□□□ 1.3
HNF4A-203ENST00000372920 KIF3BO15066 747 aa23.18■■□□□ 1.3
HNF4A-203ENST00000372920 PMFBP1Q8TBY8 1022 aa23.17■■□□□ 1.3
HNF4A-203ENST00000372920 TNNT2P45379 298 aaPredicted RBP23.16■■□□□ 1.3
HNF4A-203ENST00000372920 MORC1Q86VD1 984 aa23.16■■□□□ 1.3
HNF4A-203ENST00000372920 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
HNF4A-203ENST00000372920 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
HNF4A-203ENST00000372920 RLBP1P12271 317 aa23.16■■□□□ 1.3
HNF4A-203ENST00000372920 PRKCSHP14314 528 aaPredicted RBP23.16■■□□□ 1.3
HNF4A-203ENST00000372920 TNNQ9UQP3 1299 aa23.15■■□□□ 1.3
HNF4A-203ENST00000372920 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
HNF4A-203ENST00000372920 TCP11L2Q8N4U5 519 aa23.15■■□□□ 1.3
HNF4A-203ENST00000372920 SLKQ9H2G2 1235 aaPredicted RBP23.15■■□□□ 1.3
HNF4A-203ENST00000372920 SBNO2Q9Y2G9 1366 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms