RNA–Protein interactions for RNA: ENST00000371723.4

SDCCAG3-203, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-203ENST00000371723 CPS1P31327 1500 aa38.79■■■■□ 3.8
SDCCAG3-203ENST00000371723 ACIN1Q9UKV3 1341 aaKnown RBP38.76■■■■□ 3.8
SDCCAG3-203ENST00000371723 KIF1BO60333 1816 aa38.75■■■■□ 3.79
SDCCAG3-203ENST00000371723 RAB3GAP2Q9H2M9 1393 aa38.72■■■■□ 3.79
SDCCAG3-203ENST00000371723 HDGFP51858 240 aaKnown RBP38.72■■■■□ 3.79
SDCCAG3-203ENST00000371723 MPHOSPH9Q99550 1183 aa38.7■■■■□ 3.79
SDCCAG3-203ENST00000371723 PLEKHG1Q9ULL1 1385 aa38.69■■■■□ 3.78
SDCCAG3-203ENST00000371723 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.68■■■■□ 3.78
SDCCAG3-203ENST00000371723 FOXD1Q16676 465 aa38.65■■■■□ 3.78
SDCCAG3-203ENST00000371723 PPP1R15AO75807 674 aaPredicted RBP38.64■■■■□ 3.78
SDCCAG3-203ENST00000371723 SLC26A8Q96RN1 970 aa38.62■■■■□ 3.77
SDCCAG3-203ENST00000371723 NUTM2DQ5VT03 806 aaPredicted RBP38.6■■■■□ 3.77
SDCCAG3-203ENST00000371723 LRRC7Q96NW7 1537 aa38.58■■■■□ 3.77
SDCCAG3-203ENST00000371723 BCANQ96GW7 911 aa38.57■■■■□ 3.76
SDCCAG3-203ENST00000371723 ZNF326Q5BKZ1 582 aaKnown RBP38.56■■■■□ 3.76
SDCCAG3-203ENST00000371723 NEXMIFQ5QGS0 1516 aa38.56■■■■□ 3.76
SDCCAG3-203ENST00000371723 HRCP23327 699 aa38.55■■■■□ 3.76
SDCCAG3-203ENST00000371723 CHD2O14647 1828 aaKnown RBP38.54■■■■□ 3.76
SDCCAG3-203ENST00000371723 SENP3Q9H4L4 574 aaPredicted RBP38.54■■■■□ 3.76
SDCCAG3-203ENST00000371723 XIRP1Q702N8 1843 aaKnown RBP38.53■■■■□ 3.76
SDCCAG3-203ENST00000371723 ADAMTS13Q76LX8 1427 aa38.53■■■■□ 3.76
SDCCAG3-203ENST00000371723 NWD1Q149M9 1564 aa38.52■■■■□ 3.76
SDCCAG3-203ENST00000371723 KCNA6P17658 529 aa38.51■■■■□ 3.76
SDCCAG3-203ENST00000371723 DIP2AQ14689 1571 aa38.51■■■■□ 3.76
SDCCAG3-203ENST00000371723 TBX22Q9Y458 520 aa38.5■■■■□ 3.75
SDCCAG3-203ENST00000371723 NRXN3Q9Y4C0 1643 aa38.49■■■■□ 3.75
SDCCAG3-203ENST00000371723 CCDC144AA2RUR9 1427 aa38.48■■■■□ 3.75
SDCCAG3-203ENST00000371723 SETBP1Q9Y6X0 1596 aa38.47■■■■□ 3.75
SDCCAG3-203ENST00000371723 PPLO60437 1756 aa38.45■■■■□ 3.75
SDCCAG3-203ENST00000371723 UBAP1LF5GYI3 381 aa38.45■■■■□ 3.75
SDCCAG3-203ENST00000371723 NKTRP30414 1462 aaKnown RBP38.41■■■■□ 3.74
SDCCAG3-203ENST00000371723 RPGRIP1LQ68CZ1 1315 aa38.4■■■■□ 3.74
SDCCAG3-203ENST00000371723 SPATA31E1Q6ZUB1 1445 aa38.39■■■■□ 3.74
SDCCAG3-203ENST00000371723 PIK3R4Q99570 1358 aa38.38■■■■□ 3.73
SDCCAG3-203ENST00000371723 ALKQ9UM73 1620 aa38.38■■■■□ 3.73
SDCCAG3-203ENST00000371723 TOM1O60784 492 aa38.34■■■■□ 3.73
SDCCAG3-203ENST00000371723 IFT172Q9UG01 1749 aa38.34■■■■□ 3.73
SDCCAG3-203ENST00000371723 VGFO15240 615 aaPredicted RBP38.33■■■■□ 3.73
SDCCAG3-203ENST00000371723 TMEM94Q12767 1356 aa38.32■■■■□ 3.73
SDCCAG3-203ENST00000371723 PROSER2Q86WR7 435 aaPredicted RBP38.32■■■■□ 3.72
SDCCAG3-203ENST00000371723 ANKRD30BQ9BXX2 1392 aa38.29■■■■□ 3.72
SDCCAG3-203ENST00000371723 SETD1AO15047 1707 aaKnown RBP38.29■■■■□ 3.72
SDCCAG3-203ENST00000371723 PTPRUQ92729 1446 aa38.29■■■■□ 3.72
SDCCAG3-203ENST00000371723 RGL3Q3MIN7 710 aa38.26■■■■□ 3.72
SDCCAG3-203ENST00000371723 XRN1Q8IZH2 1706 aaKnown RBP38.26■■■■□ 3.71
SDCCAG3-203ENST00000371723 METP08581 1390 aa38.24■■■■□ 3.71
SDCCAG3-203ENST00000371723 RBM33Q96EV2 1170 aaKnown RBP38.24■■■■□ 3.71
SDCCAG3-203ENST00000371723 AMOTL2Q9Y2J4 779 aa38.21■■■■□ 3.71
SDCCAG3-203ENST00000371723 PIP4K2BP78356 416 aa38.2■■■■□ 3.71
SDCCAG3-203ENST00000371723 NCOA3Q9Y6Q9 1424 aa38.17■■■■□ 3.7
SDCCAG3-203ENST00000371723 ADGRF5Q8IZF2 1346 aa38.15■■■■□ 3.7
SDCCAG3-203ENST00000371723 SCAF1Q9H7N4 1312 aaKnown RBP38.15■■■■□ 3.7
SDCCAG3-203ENST00000371723 MSH6P52701 1360 aa38.11■■■■□ 3.69
SDCCAG3-203ENST00000371723 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.07■■■■□ 3.68
SDCCAG3-203ENST00000371723 PIK3C2GO75747 1445 aa38.06■■■■□ 3.68
SDCCAG3-203ENST00000371723 MYOM2P54296 1465 aa38.06■■■■□ 3.68
SDCCAG3-203ENST00000371723 NRXN1Q9ULB1 1477 aa38.04■■■■□ 3.68
SDCCAG3-203ENST00000371723 TRIM26Q12899 539 aaPredicted RBP38.03■■■■□ 3.68
SDCCAG3-203ENST00000371723 PRAG1Q86YV5 1406 aa38.02■■■■□ 3.68
SDCCAG3-203ENST00000371723 HSPA1LP34931 641 aa38.01■■■■□ 3.68
SDCCAG3-203ENST00000371723 C14orf37Q86TY3 774 aa38■■■■□ 3.67
SDCCAG3-203ENST00000371723 FAM135BQ49AJ0 1406 aa37.99■■■■□ 3.67
SDCCAG3-203ENST00000371723 C19orf44Q9H6X5 657 aa37.99■■■■□ 3.67
SDCCAG3-203ENST00000371723 PTCH1Q13635 1447 aa37.98■■■■□ 3.67
SDCCAG3-203ENST00000371723 ROBO1Q9Y6N7 1651 aa37.96■■■■□ 3.67
SDCCAG3-203ENST00000371723 ASXL1Q8IXJ9 1541 aa37.96■■■■□ 3.67
SDCCAG3-203ENST00000371723 LAMC1P11047 1609 aa37.94■■■■□ 3.66
SDCCAG3-203ENST00000371723 ROBO2Q9HCK4 1378 aa37.93■■■■□ 3.66
SDCCAG3-203ENST00000371723 NALCNQ8IZF0 1738 aa37.93■■■■□ 3.66
SDCCAG3-203ENST00000371723 SLAIN2Q9P270 581 aa37.93■■■■□ 3.66
SDCCAG3-203ENST00000371723 DCCP43146 1447 aa37.91■■■■□ 3.66
SDCCAG3-203ENST00000371723 CADPS2Q86UW7 1296 aa37.91■■■■□ 3.66
SDCCAG3-203ENST00000371723 C14orf93Q9H972 538 aaKnown RBP37.91■■■■□ 3.66
SDCCAG3-203ENST00000371723 KNDC1Q76NI1 1749 aa37.9■■■■□ 3.66
SDCCAG3-203ENST00000371723 ADGRL3Q9HAR2 1447 aa37.89■■■■□ 3.66
SDCCAG3-203ENST00000371723 DHX57Q6P158 1386 aaKnown RBP37.89■■■■□ 3.66
SDCCAG3-203ENST00000371723 ATF3P18847 181 aa37.88■■■■□ 3.65
SDCCAG3-203ENST00000371723 DCAF11Q8TEB1 546 aa37.87■■■■□ 3.65
SDCCAG3-203ENST00000371723 LRPPRCP42704 1394 aaKnown RBP37.87■■■■□ 3.65
SDCCAG3-203ENST00000371723 TECPR2O15040 1411 aa37.87■■■■□ 3.65
SDCCAG3-203ENST00000371723 TMEM132EQ6IEE7 984 aa37.86■■■■□ 3.65
SDCCAG3-203ENST00000371723 STAC3Q96MF2 364 aa37.86■■■■□ 3.65
SDCCAG3-203ENST00000371723 CFAP70Q5T0N1 1121 aa37.84■■■■□ 3.65
SDCCAG3-203ENST00000371723 ABCC11Q96J66 1382 aa37.82■■■■□ 3.65
SDCCAG3-203ENST00000371723 KDM2AQ9Y2K7 1162 aa37.82■■■■□ 3.64
SDCCAG3-203ENST00000371723 YTHDC2Q9H6S0 1430 aaKnown RBP37.81■■■■□ 3.64
SDCCAG3-203ENST00000371723 STK26Q9P289 416 aa37.79■■■■□ 3.64
SDCCAG3-203ENST00000371723 MST1RQ04912 1400 aa37.77■■■■□ 3.64
SDCCAG3-203ENST00000371723 ADGRB1O14514 1584 aa37.75■■■■□ 3.63
SDCCAG3-203ENST00000371723 PHLPP1O60346 1717 aa37.73■■■■□ 3.63
SDCCAG3-203ENST00000371723 WAPLQ7Z5K2 1190 aa37.7■■■■□ 3.63
SDCCAG3-203ENST00000371723 SIRT1Q96EB6 747 aa37.7■■■■□ 3.63
SDCCAG3-203ENST00000371723 PLEKHH1Q9ULM0 1364 aa37.68■■■■□ 3.62
SDCCAG3-203ENST00000371723 SIN3AQ96ST3 1273 aa37.68■■■■□ 3.62
SDCCAG3-203ENST00000371723 CDC42BPGQ6DT37 1551 aa37.67■■■■□ 3.62
SDCCAG3-203ENST00000371723 AHDC1Q5TGY3 1603 aaPredicted RBP37.66■■■■□ 3.62
SDCCAG3-203ENST00000371723 BRINP3Q76B58 766 aa37.66■■■■□ 3.62
SDCCAG3-203ENST00000371723 KIAA1210Q9ULL0 1709 aa37.65■■■■□ 3.62
SDCCAG3-203ENST00000371723 DLC1Q96QB1 1528 aa37.65■■■■□ 3.62
SDCCAG3-203ENST00000371723 COL16A1Q07092 1604 aaPredicted RBP37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms