RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 PLCH2O75038 1416 aa11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 NEO1Q92859 1461 aa11.61□□□□□ -0.55
SMARCA1-202ENST00000371122 SAMD9LQ8IVG5 1584 aa11.61□□□□□ -0.55
SMARCA1-202ENST00000371122 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 ABCC1P33527 1531 aa11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 KDM5CP41229 1560 aa11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 ZMYM4Q5VZL5 1548 aa11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 ARHGEF5Q12774 1597 aa11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 IPO9Q96P70 1041 aaKnown RBP11.6□□□□□ -0.55
SMARCA1-202ENST00000371122 PDE4AP27815 886 aa11.59□□□□□ -0.55
SMARCA1-202ENST00000371122 FOXD4L5Q5VV16 416 aaPredicted RBP11.59□□□□□ -0.55
SMARCA1-202ENST00000371122 FOXD4L4Q8WXT5 416 aaPredicted RBP11.59□□□□□ -0.55
SMARCA1-202ENST00000371122 MYBBP1AQ9BQG0 1328 aaKnown RBP11.59□□□□□ -0.55
SMARCA1-202ENST00000371122 ARID3AQ99856 593 aa11.59□□□□□ -0.55
SMARCA1-202ENST00000371122 MAST1Q9Y2H9 1570 aa11.59□□□□□ -0.55
SMARCA1-202ENST00000371122 PTMAP06454 111 aaKnown RBP11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 KCNJ4P48050 445 aa11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 MIA2Q96PC5 1412 aa11.58□□□□□ -0.56
SMARCA1-202ENST00000371122 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-202ENST00000371122 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-202ENST00000371122 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-202ENST00000371122 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
SMARCA1-202ENST00000371122 CCDC7Q96M83 1385 aa11.57□□□□□ -0.56
SMARCA1-202ENST00000371122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■□□□□ 8.3
SMARCA1-202ENST00000371122 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
SMARCA1-202ENST00000371122 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
SMARCA1-202ENST00000371122 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
SMARCA1-202ENST00000371122 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
SMARCA1-202ENST00000371122 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 HSCBQ8IWL3 235 aa11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 DNTTIP2Q5QJE6 756 aaKnown RBP11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 INO80Q9ULG1 1556 aaPredicted RBP11.55□□□□□ -0.56
SMARCA1-202ENST00000371122 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 FGD1P98174 961 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 MBD5Q9P267 1494 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 PTPN23Q9H3S7 1636 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 ARHGEF12Q9NZN5 1544 aa11.54□□□□□ -0.56
SMARCA1-202ENST00000371122 MYOM3Q5VTT5 1437 aa11.53□□□□□ -0.56
SMARCA1-202ENST00000371122 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
SMARCA1-202ENST00000371122 CD109Q6YHK3 1445 aa11.53□□□□□ -0.56
SMARCA1-202ENST00000371122 HMOX1P09601 288 aa11.53□□□□□ -0.56
SMARCA1-202ENST00000371122 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
SMARCA1-202ENST00000371122 RWDD1Q9H446 243 aaPredicted RBP11.52□□□□□ -0.56
SMARCA1-202ENST00000371122 TSPOAP1O95153 1857 aa11.52□□□□□ -0.56
SMARCA1-202ENST00000371122 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
SMARCA1-202ENST00000371122 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
SMARCA1-202ENST00000371122 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
SMARCA1-202ENST00000371122 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
SMARCA1-202ENST00000371122 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
SMARCA1-202ENST00000371122 FANCAO15360 1455 aa11.5□□□□□ -0.57
SMARCA1-202ENST00000371122 PLEKHH2Q8IVE3 1493 aa11.5□□□□□ -0.57
SMARCA1-202ENST00000371122 SHANK2Q9UPX8 1470 aa11.5□□□□□ -0.57
SMARCA1-202ENST00000371122 COL17A1Q9UMD9 1497 aaPredicted RBP11.5□□□□□ -0.57
SMARCA1-202ENST00000371122 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 KIDINS220Q9ULH0 1771 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 ANKRD45Q5TZF3 282 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 TERF2IPQ9NYB0 399 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
SMARCA1-202ENST00000371122 MS4A1P11836 297 aa11.48□□□□□ -0.57
SMARCA1-202ENST00000371122 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
SMARCA1-202ENST00000371122 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
SMARCA1-202ENST00000371122 AMPHP49418 695 aa11.48□□□□□ -0.57
SMARCA1-202ENST00000371122 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
SMARCA1-202ENST00000371122 SIGLEC1Q9BZZ2 1709 aa11.48□□□□□ -0.57
SMARCA1-202ENST00000371122 ANKRD50Q9ULJ7 1429 aa11.47□□□□□ -0.57
SMARCA1-202ENST00000371122 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
SMARCA1-202ENST00000371122 ARHGAP5Q13017 1502 aa11.47□□□□□ -0.57
SMARCA1-202ENST00000371122 ZFYVE16Q7Z3T8 1539 aa11.47□□□□□ -0.57
SMARCA1-202ENST00000371122 ADGRL2O95490 1459 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 MLH3Q9UHC1 1453 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 BCAR3O75815 825 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 HECW2Q9P2P5 1572 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 MTHFSP49914 203 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.57
SMARCA1-202ENST00000371122 SYCP2Q9BX26 1530 aa11.46□□□□□ -0.58
SMARCA1-202ENST00000371122 KDM6BO15054 1643 aa11.46□□□□□ -0.58
SMARCA1-202ENST00000371122 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms