RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
LMO4-202ENST00000370544 API5Q9BZZ5 524 aaKnown RBP24.26■■□□□ 1.47
LMO4-202ENST00000370544 DZIP1LQ8IYY4 767 aaKnown RBP24.26■■□□□ 1.47
LMO4-202ENST00000370544 FOXD4L5Q5VV16 416 aaPredicted RBP24.26■■□□□ 1.47
LMO4-202ENST00000370544 FOXD4L4Q8WXT5 416 aaPredicted RBP24.26■■□□□ 1.47
LMO4-202ENST00000370544 RASSF8Q8NHQ8 419 aa24.25■■□□□ 1.47
LMO4-202ENST00000370544 C9orf78Q9NZ63 289 aaPredicted RBP24.25■■□□□ 1.47
LMO4-202ENST00000370544 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
LMO4-202ENST00000370544 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
LMO4-202ENST00000370544 PHF14O94880 888 aa24.23■■□□□ 1.47
LMO4-202ENST00000370544 NECTIN2Q92692 538 aa24.23■■□□□ 1.47
LMO4-202ENST00000370544 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
LMO4-202ENST00000370544 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LMO4-202ENST00000370544 CFTRP13569 1480 aa24.22■■□□□ 1.47
LMO4-202ENST00000370544 DIAPH3Q9NSV4 1193 aa24.22■■□□□ 1.47
LMO4-202ENST00000370544 ROCK1Q13464 1354 aa24.21■■□□□ 1.47
LMO4-202ENST00000370544 CABP2Q9NPB3 220 aa24.21■■□□□ 1.47
LMO4-202ENST00000370544 SF3A1Q15459 793 aaKnown RBP24.2■■□□□ 1.46
LMO4-202ENST00000370544 GGNBP2Q9H3C7 697 aa24.2■■□□□ 1.46
LMO4-202ENST00000370544 GNAI1P63096 354 aa24.19■■□□□ 1.46
LMO4-202ENST00000370544 H3BQV1 296 aa24.19■■□□□ 1.46
LMO4-202ENST00000370544 IFFO2Q5TF58 517 aa24.19■■□□□ 1.46
LMO4-202ENST00000370544 TMEM132EQ6IEE7 984 aa24.19■■□□□ 1.46
LMO4-202ENST00000370544 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
LMO4-202ENST00000370544 PRG4Q92954 1404 aaPredicted RBP24.19■■□□□ 1.46
LMO4-202ENST00000370544 AFAP1Q8N556 730 aa24.19■■□□□ 1.46
LMO4-202ENST00000370544 HMOX1P09601 288 aa24.18■■□□□ 1.46
LMO4-202ENST00000370544 FKBP5Q13451 457 aaPredicted RBP24.18■■□□□ 1.46
LMO4-202ENST00000370544 DDX58O95786 925 aaKnown RBP24.17■■□□□ 1.46
LMO4-202ENST00000370544 SLC4A3P48751 1232 aa24.17■■□□□ 1.46
LMO4-202ENST00000370544 FAM184AQ8NB25 1140 aa24.16■■□□□ 1.46
LMO4-202ENST00000370544 RUFY2Q8WXA3 655 aa24.16■■□□□ 1.46
LMO4-202ENST00000370544 CHMP4CQ96CF2 233 aa24.16■■□□□ 1.46
LMO4-202ENST00000370544 TSPYL4Q9UJ04 414 aa24.16■■□□□ 1.46
LMO4-202ENST00000370544 EFCAB5A4FU69 1503 aa24.16■■□□□ 1.46
LMO4-202ENST00000370544 REC8O95072 547 aa24.15■■□□□ 1.46
LMO4-202ENST00000370544 LRRFIP1Q32MZ4 808 aaKnown RBP24.15■■□□□ 1.46
LMO4-202ENST00000370544 IFIT2P09913 472 aaKnown RBP24.15■■□□□ 1.46
LMO4-202ENST00000370544 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
LMO4-202ENST00000370544 WASHC2AQ641Q2 1341 aa24.14■■□□□ 1.45
LMO4-202ENST00000370544 ATP6V1DQ9Y5K8 247 aa24.13■■□□□ 1.45
LMO4-202ENST00000370544 EHBP1L1Q8N3D4 1523 aa24.13■■□□□ 1.45
LMO4-202ENST00000370544 BRD4O60885 1362 aaPredicted RBP24.13■■□□□ 1.45
LMO4-202ENST00000370544 CREBRFQ8IUR6 639 aa24.12■■□□□ 1.45
LMO4-202ENST00000370544 NESP48681 1621 aa24.11■■□□□ 1.45
LMO4-202ENST00000370544 USP35Q9P2H5 1018 aa24.11■■□□□ 1.45
LMO4-202ENST00000370544 CFAP70Q5T0N1 1121 aa24.11■■□□□ 1.45
LMO4-202ENST00000370544 IFT140Q96RY7 1462 aa24.11■■□□□ 1.45
LMO4-202ENST00000370544 MARCH6O60337 910 aa24.1■■□□□ 1.45
LMO4-202ENST00000370544 DDX49Q9Y6V7 483 aaKnown RBP24.1■■□□□ 1.45
LMO4-202ENST00000370544 ZKSCAN1P17029 563 aaPredicted RBP24.1■■□□□ 1.45
LMO4-202ENST00000370544 SYTL4Q96C24 671 aaPredicted RBP24.1■■□□□ 1.45
LMO4-202ENST00000370544 RAPGEF4Q8WZA2 1011 aa24.09■■□□□ 1.45
LMO4-202ENST00000370544 ATF3P18847 181 aa24.09■■□□□ 1.45
LMO4-202ENST00000370544 G3BP1Q13283 466 aaKnown RBP eCLIP24.09■■□□□ 1.45
LMO4-202ENST00000370544 AKAP17AQ02040 695 aaKnown RBP24.09■■□□□ 1.45
LMO4-202ENST00000370544 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.45
LMO4-202ENST00000370544 SYNE3Q6ZMZ3 975 aa24.08■■□□□ 1.45
LMO4-202ENST00000370544 C9orf84Q5VXU9 1444 aa24.08■■□□□ 1.44
LMO4-202ENST00000370544 SKOR2Q2VWA4 1001 aaPredicted RBP24.08■■□□□ 1.44
LMO4-202ENST00000370544 ANO2Q9NQ90 1003 aa24.07■■□□□ 1.44
LMO4-202ENST00000370544 ADAMTS8Q9UP79 889 aa24.07■■□□□ 1.44
LMO4-202ENST00000370544 FOXD4L6Q3SYB3 417 aaPredicted RBP24.07■■□□□ 1.44
LMO4-202ENST00000370544 FOXD4L3Q6VB84 417 aaPredicted RBP24.07■■□□□ 1.44
LMO4-202ENST00000370544 VPS53Q5VIR6 699 aa24.07■■□□□ 1.44
LMO4-202ENST00000370544 HFM1A2PYH4 1435 aa24.06■■□□□ 1.44
LMO4-202ENST00000370544 MTHFSP49914 203 aa24.06■■□□□ 1.44
LMO4-202ENST00000370544 NUTM2GQ5VZR2 741 aa24.06■■□□□ 1.44
LMO4-202ENST00000370544 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
LMO4-202ENST00000370544 NOC3LQ8WTT2 800 aaKnown RBP24.05■■□□□ 1.44
LMO4-202ENST00000370544 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
LMO4-202ENST00000370544 NLRP6P59044 892 aa24.04■■□□□ 1.44
LMO4-202ENST00000370544 MSH5O43196 834 aa24.04■■□□□ 1.44
LMO4-202ENST00000370544 PLEKHH2Q8IVE3 1493 aa24.04■■□□□ 1.44
LMO4-202ENST00000370544 AAMPQ13685 434 aa24.04■■□□□ 1.44
LMO4-202ENST00000370544 PANK1Q8TE04 598 aa24.04■■□□□ 1.44
LMO4-202ENST00000370544 HSP90AB4PQ58FF6 505 aa24.03■■□□□ 1.44
LMO4-202ENST00000370544 MCTP1Q6DN14 999 aa24.03■■□□□ 1.44
LMO4-202ENST00000370544 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
LMO4-202ENST00000370544 KIAA1107Q9UPP5 1409 aa24.03■■□□□ 1.44
LMO4-202ENST00000370544 NOL10Q9BSC4 688 aaKnown RBP24.03■■□□□ 1.44
LMO4-202ENST00000370544 CPLX2Q6PUV4 134 aaKnown RBP24.03■■□□□ 1.44
LMO4-202ENST00000370544 PPP2R1AP30153 589 aa24.02■■□□□ 1.44
LMO4-202ENST00000370544 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
LMO4-202ENST00000370544 INTS3Q68E01 1043 aaKnown RBP24.02■■□□□ 1.44
LMO4-202ENST00000370544 AMOTL1Q8IY63 956 aa24.02■■□□□ 1.44
LMO4-202ENST00000370544 NLRP2Q9NX02 1062 aa24.02■■□□□ 1.44
LMO4-202ENST00000370544 LNPKQ9C0E8 428 aa24.01■■□□□ 1.43
LMO4-202ENST00000370544 APPP05067 770 aa24.01■■□□□ 1.43
LMO4-202ENST00000370544 RNF20Q5VTR2 975 aa24.01■■□□□ 1.43
LMO4-202ENST00000370544 ARID3AQ99856 593 aa24■■□□□ 1.43
LMO4-202ENST00000370544 TROQ12816 1431 aaPredicted RBP24■■□□□ 1.43
LMO4-202ENST00000370544 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
LMO4-202ENST00000370544 NBPF1Q3BBV0 1214 aa24■■□□□ 1.43
LMO4-202ENST00000370544 AMER1Q5JTC6 1135 aaPredicted RBP24■■□□□ 1.43
LMO4-202ENST00000370544 TCP11L2Q8N4U5 519 aa24■■□□□ 1.43
LMO4-202ENST00000370544 RIC3Q7Z5B4 369 aa23.99■■□□□ 1.43
LMO4-202ENST00000370544 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
LMO4-202ENST00000370544 TPD52L1Q16890 204 aaPredicted RBP23.98■■□□□ 1.43
LMO4-202ENST00000370544 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms