RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 PIK3R4Q99570 1358 aa8.74□□□□□ -1.01
SYCP1-201ENST00000369518 NPM2Q86SE8 214 aaKnown RBP8.74□□□□□ -1.01
SYCP1-201ENST00000369518 DAPK1P53355 1430 aa8.74□□□□□ -1.01
SYCP1-201ENST00000369518 TMEM131LA2VDJ0 1609 aa8.74□□□□□ -1.01
SYCP1-201ENST00000369518 KANK1Q14678 1352 aa8.74□□□□□ -1.01
SYCP1-201ENST00000369518 ABCC5O15440 1437 aa8.73□□□□□ -1.01
SYCP1-201ENST00000369518 PRAG1Q86YV5 1406 aa8.73□□□□□ -1.01
SYCP1-201ENST00000369518 WASHC2CQ9Y4E1 1318 aa8.73□□□□□ -1.01
SYCP1-201ENST00000369518 IRX6P78412 446 aaPredicted RBP8.73□□□□□ -1.01
SYCP1-201ENST00000369518 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
SYCP1-201ENST00000369518 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
SYCP1-201ENST00000369518 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
SYCP1-201ENST00000369518 TMEM2Q9UHN6 1383 aa8.71□□□□□ -1.01
SYCP1-201ENST00000369518 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
SYCP1-201ENST00000369518 ROBO1Q9Y6N7 1651 aa8.71□□□□□ -1.01
SYCP1-201ENST00000369518 KIF3BO15066 747 aa8.71□□□□□ -1.02
SYCP1-201ENST00000369518 GGT6Q6P531 493 aa8.71□□□□□ -1.02
SYCP1-201ENST00000369518 DCCP43146 1447 aa8.71□□□□□ -1.02
SYCP1-201ENST00000369518 XRN1Q8IZH2 1706 aaKnown RBP8.71□□□□□ -1.02
SYCP1-201ENST00000369518 A0A0U1RQG5 324 aaPredicted RBP8.7□□□□□ -1.02
SYCP1-201ENST00000369518 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 ANKRD30AQ9BXX3 1397 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 PHLPP1O60346 1717 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 ZFYVE9O95405 1425 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 ROCK1Q13464 1354 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 NHSL1Q5SYE7 1610 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 CDK12Q9NYV4 1490 aaPredicted RBP8.7□□□□□ -1.02
SYCP1-201ENST00000369518 KIF15Q9NS87 1388 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 PDE4CQ08493 712 aa8.7□□□□□ -1.02
SYCP1-201ENST00000369518 SETBP1Q9Y6X0 1596 aa8.69□□□□□ -1.02
SYCP1-201ENST00000369518 TRPM2O94759 1503 aa8.69□□□□□ -1.02
SYCP1-201ENST00000369518 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
SYCP1-201ENST00000369518 PLEKHG1Q9ULL1 1385 aa8.69□□□□□ -1.02
SYCP1-201ENST00000369518 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
SYCP1-201ENST00000369518 E9PCH4 1651 aa8.69□□□□□ -1.02
SYCP1-201ENST00000369518 ZNF644Q9H582 1327 aaPredicted RBP8.69□□□□□ -1.02
SYCP1-201ENST00000369518 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
SYCP1-201ENST00000369518 SPHKAPQ2M3C7 1700 aa8.68□□□□□ -1.02
SYCP1-201ENST00000369518 SLC52A1Q9NWF4 448 aa8.67□□□□□ -1.02
SYCP1-201ENST00000369518 TRIM26Q12899 539 aaPredicted RBP8.66□□□□□ -1.02
SYCP1-201ENST00000369518 KCNA6P17658 529 aa8.66□□□□□ -1.02
SYCP1-201ENST00000369518 EID1Q9Y6B2 187 aa8.65□□□□□ -1.02
SYCP1-201ENST00000369518 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.65□□□□□ -1.02
SYCP1-201ENST00000369518 HDGFP51858 240 aaKnown RBP8.64□□□□□ -1.03
SYCP1-201ENST00000369518 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
SYCP1-201ENST00000369518 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
SYCP1-201ENST00000369518 HSPA1LP34931 641 aa8.64□□□□□ -1.03
SYCP1-201ENST00000369518 COL22A1Q8NFW1 1626 aaPredicted RBP8.64□□□□□ -1.03
SYCP1-201ENST00000369518 NRXN3Q9Y4C0 1643 aa8.64□□□□□ -1.03
SYCP1-201ENST00000369518 FBXO31Q5XUX0 539 aaPredicted RBP8.63□□□□□ -1.03
SYCP1-201ENST00000369518 KIF1BO60333 1816 aa8.63□□□□□ -1.03
SYCP1-201ENST00000369518 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
SYCP1-201ENST00000369518 KNDC1Q76NI1 1749 aa8.62□□□□□ -1.03
SYCP1-201ENST00000369518 MARF1Q9Y4F3 1742 aaKnown RBP8.61□□□□□ -1.03
SYCP1-201ENST00000369518 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
SYCP1-201ENST00000369518 JCADQ9P266 1359 aa8.6□□□□□ -1.03
SYCP1-201ENST00000369518 SPATA31A6Q5VVP1 1343 aa8.6□□□□□ -1.03
SYCP1-201ENST00000369518 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
SYCP1-201ENST00000369518 TBX22Q9Y458 520 aa8.6□□□□□ -1.03
SYCP1-201ENST00000369518 ANKRD50Q9ULJ7 1429 aa8.6□□□□□ -1.03
SYCP1-201ENST00000369518 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
SYCP1-201ENST00000369518 MSH6P52701 1360 aa8.59□□□□□ -1.03
SYCP1-201ENST00000369518 SCAF1Q9H7N4 1312 aaKnown RBP8.59□□□□□ -1.03
SYCP1-201ENST00000369518 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
SYCP1-201ENST00000369518 IFT172Q9UG01 1749 aa8.58□□□□□ -1.04
SYCP1-201ENST00000369518 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
SYCP1-201ENST00000369518 ADAMTS13Q76LX8 1427 aa8.58□□□□□ -1.04
SYCP1-201ENST00000369518 NALCNQ8IZF0 1738 aa8.58□□□□□ -1.04
SYCP1-201ENST00000369518 SETD5Q9C0A6 1442 aa8.57□□□□□ -1.04
SYCP1-201ENST00000369518 PPLO60437 1756 aa8.57□□□□□ -1.04
SYCP1-201ENST00000369518 TMEM94Q12767 1356 aa8.57□□□□□ -1.04
SYCP1-201ENST00000369518 LTKP29376 864 aa8.57□□□□□ -1.04
SYCP1-201ENST00000369518 PTCH1Q13635 1447 aa8.56□□□□□ -1.04
SYCP1-201ENST00000369518 HRCP23327 699 aa8.56□□□□□ -1.04
SYCP1-201ENST00000369518 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
SYCP1-201ENST00000369518 UBE2Q2Q8WVN8 375 aa8.56□□□□□ -1.04
SYCP1-201ENST00000369518 KIF1AQ12756 1690 aa8.55□□□□□ -1.04
SYCP1-201ENST00000369518 CDC42BPGQ6DT37 1551 aa8.55□□□□□ -1.04
SYCP1-201ENST00000369518 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
SYCP1-201ENST00000369518 PHF23Q9BUL5 403 aaPredicted RBP8.54□□□□□ -1.04
SYCP1-201ENST00000369518 CLTCL1P53675 1640 aa8.53□□□□□ -1.04
SYCP1-201ENST00000369518 IDI1Q13907 227 aa8.53□□□□□ -1.04
SYCP1-201ENST00000369518 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
SYCP1-201ENST00000369518 PAXIP1Q6ZW49 1069 aaPredicted RBP8.53□□□□□ -1.04
SYCP1-201ENST00000369518 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
SYCP1-201ENST00000369518 CADPS2Q86UW7 1296 aa8.51□□□□□ -1.05
SYCP1-201ENST00000369518 ZNF772Q68DY9 489 aaPredicted RBP8.5□□□□□ -1.05
SYCP1-201ENST00000369518 RGS17Q9UGC6 210 aaPredicted RBP8.5□□□□□ -1.05
SYCP1-201ENST00000369518 MST1RQ04912 1400 aa8.5□□□□□ -1.05
SYCP1-201ENST00000369518 NWD2Q9ULI1 1742 aa8.5□□□□□ -1.05
SYCP1-201ENST00000369518 PIP4K2BP78356 416 aa8.5□□□□□ -1.05
SYCP1-201ENST00000369518 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
SYCP1-201ENST00000369518 RRBP1Q9P2E9 1410 aaKnown RBP8.5□□□□□ -1.05
SYCP1-201ENST00000369518 RPGRIP1LQ68CZ1 1315 aa8.49□□□□□ -1.05
SYCP1-201ENST00000369518 LRP6O75581 1613 aa8.49□□□□□ -1.05
SYCP1-201ENST00000369518 TECPR2O15040 1411 aa8.49□□□□□ -1.05
SYCP1-201ENST00000369518 PROSER2Q86WR7 435 aaPredicted RBP8.49□□□□□ -1.05
SYCP1-201ENST00000369518 FMN2Q9NZ56 1722 aa8.49□□□□□ -1.05
SYCP1-201ENST00000369518 HFM1A2PYH4 1435 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms