RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 SIGLEC1Q9BZZ2 1709 aa32.29■■■□□ 2.76
PRDM13-202ENST00000369215 TMF1P82094 1093 aa32.29■■■□□ 2.76
PRDM13-202ENST00000369215 DNAJC5Q9H3Z4 198 aa32.29■■■□□ 2.76
PRDM13-202ENST00000369215 NRXN1Q9ULB1 1477 aa32.27■■■□□ 2.76
PRDM13-202ENST00000369215 ADGRF5Q8IZF2 1346 aa32.26■■■□□ 2.76
PRDM13-202ENST00000369215 CHGAP10645 457 aaKnown RBP32.25■■■□□ 2.75
PRDM13-202ENST00000369215 KIF13AQ9H1H9 1805 aa32.25■■■□□ 2.75
PRDM13-202ENST00000369215 HNRNPUQ00839 825 aaKnown RBP eCLIP32.25■■■□□ 2.75
PRDM13-202ENST00000369215 PIK3C2BO00750 1634 aa32.24■■■□□ 2.75
PRDM13-202ENST00000369215 SYNMO15061 1565 aa32.23■■■□□ 2.75
PRDM13-202ENST00000369215 PPLO60437 1756 aa32.23■■■□□ 2.75
PRDM13-202ENST00000369215 REREQ9P2R6 1566 aa32.22■■■□□ 2.75
PRDM13-202ENST00000369215 EIF3AQ14152 1382 aaKnown RBP32.22■■■□□ 2.75
PRDM13-202ENST00000369215 KTN1Q86UP2 1357 aaKnown RBP32.21■■■□□ 2.75
PRDM13-202ENST00000369215 CNGB1Q14028 1251 aaPredicted RBP32.2■■■□□ 2.75
PRDM13-202ENST00000369215 CFAP70Q5T0N1 1121 aa32.2■■■□□ 2.74
PRDM13-202ENST00000369215 FAM9BQ8IZU0 186 aa32.18■■■□□ 2.74
PRDM13-202ENST00000369215 RPGRIP1LQ68CZ1 1315 aa32.18■■■□□ 2.74
PRDM13-202ENST00000369215 AGLP35573 1532 aa32.16■■■□□ 2.74
PRDM13-202ENST00000369215 RALBP1Q15311 655 aa32.15■■■□□ 2.74
PRDM13-202ENST00000369215 SETBP1Q9Y6X0 1596 aa32.12■■■□□ 2.73
PRDM13-202ENST00000369215 PREX1Q8TCU6 1659 aa32.12■■■□□ 2.73
PRDM13-202ENST00000369215 PIK3C2GO75747 1445 aa32.12■■■□□ 2.73
PRDM13-202ENST00000369215 PER1O15534 1290 aaPredicted RBP32.11■■■□□ 2.73
PRDM13-202ENST00000369215 CDCA8Q53HL2 280 aa32.1■■■□□ 2.73
PRDM13-202ENST00000369215 MYBBP1AQ9BQG0 1328 aaKnown RBP32.09■■■□□ 2.73
PRDM13-202ENST00000369215 SLC52A1Q9NWF4 448 aa32.08■■■□□ 2.73
PRDM13-202ENST00000369215 PANK3Q9H999 370 aa32.07■■■□□ 2.72
PRDM13-202ENST00000369215 PPP6R1Q9UPN7 881 aa32.06■■■□□ 2.72
PRDM13-202ENST00000369215 NEXMIFQ5QGS0 1516 aa32.05■■■□□ 2.72
PRDM13-202ENST00000369215 PARD3Q8TEW0 1356 aa32.05■■■□□ 2.72
PRDM13-202ENST00000369215 SLC24A1O60721 1099 aa32.05■■■□□ 2.72
PRDM13-202ENST00000369215 IDI1Q13907 227 aa32.05■■■□□ 2.72
PRDM13-202ENST00000369215 C14orf93Q9H972 538 aaKnown RBP32.05■■■□□ 2.72
PRDM13-202ENST00000369215 ARHGEF40Q8TER5 1519 aa32.05■■■□□ 2.72
PRDM13-202ENST00000369215 MYO3AQ8NEV4 1616 aa32.05■■■□□ 2.72
PRDM13-202ENST00000369215 BRD4O60885 1362 aaPredicted RBP32.04■■■□□ 2.72
PRDM13-202ENST00000369215 TMC1Q8TDI8 760 aa32.02■■■□□ 2.72
PRDM13-202ENST00000369215 KDM5AP29375 1690 aaKnown RBP32■■■□□ 2.71
PRDM13-202ENST00000369215 ADGRB1O14514 1584 aa31.99■■■□□ 2.71
PRDM13-202ENST00000369215 VGFO15240 615 aaPredicted RBP31.99■■■□□ 2.71
PRDM13-202ENST00000369215 ZBED9Q6R2W3 1325 aa31.99■■■□□ 2.71
PRDM13-202ENST00000369215 ERVK-7P63135 1459 aa31.98■■■□□ 2.71
PRDM13-202ENST00000369215 CLTCQ00610 1675 aaKnown RBP31.97■■■□□ 2.71
PRDM13-202ENST00000369215 PNISRQ8TF01 805 aaKnown RBP31.97■■■□□ 2.71
PRDM13-202ENST00000369215 TMEM131LA2VDJ0 1609 aa31.97■■■□□ 2.71
PRDM13-202ENST00000369215 MYOM1P52179 1685 aa31.97■■■□□ 2.71
PRDM13-202ENST00000369215 SBNO2Q9Y2G9 1366 aa31.96■■■□□ 2.71
PRDM13-202ENST00000369215 MYO5BQ9ULV0 1848 aa31.95■■■□□ 2.71
PRDM13-202ENST00000369215 FKBP8Q14318 412 aa31.95■■■□□ 2.71
PRDM13-202ENST00000369215 ZFYVE9O95405 1425 aa31.94■■■□□ 2.7
PRDM13-202ENST00000369215 NLRP13Q86W25 1043 aa31.94■■■□□ 2.7
PRDM13-202ENST00000369215 FBXO31Q5XUX0 539 aaPredicted RBP31.94■■■□□ 2.7
PRDM13-202ENST00000369215 CENPJQ9HC77 1338 aaPredicted RBP31.92■■■□□ 2.7
PRDM13-202ENST00000369215 CC2D1BQ5T0F9 858 aaKnown RBP31.91■■■□□ 2.7
PRDM13-202ENST00000369215 NUTM2DQ5VT03 806 aaPredicted RBP31.9■■■□□ 2.7
PRDM13-202ENST00000369215 TRAK1Q9UPV9 953 aa31.89■■■□□ 2.7
PRDM13-202ENST00000369215 LRPPRCP42704 1394 aaKnown RBP31.88■■■□□ 2.69
PRDM13-202ENST00000369215 TMEM132EQ6IEE7 984 aa31.88■■■□□ 2.69
PRDM13-202ENST00000369215 KNSTRNQ9Y448 316 aa31.88■■■□□ 2.69
PRDM13-202ENST00000369215 NEFLP07196 543 aa31.87■■■□□ 2.69
PRDM13-202ENST00000369215 QRICH2Q9H0J4 1663 aa31.87■■■□□ 2.69
PRDM13-202ENST00000369215 SPATA31D1Q6ZQQ2 1576 aa31.86■■■□□ 2.69
PRDM13-202ENST00000369215 MLECQ14165 292 aa31.86■■■□□ 2.69
PRDM13-202ENST00000369215 TSHZ2Q9NRE2 1034 aa31.86■■■□□ 2.69
PRDM13-202ENST00000369215 BCANQ96GW7 911 aa31.83■■■□□ 2.69
PRDM13-202ENST00000369215 ASXL1Q8IXJ9 1541 aa31.82■■■□□ 2.68
PRDM13-202ENST00000369215 ARHGEF28Q8N1W1 1705 aaKnown RBP31.8■■■□□ 2.68
PRDM13-202ENST00000369215 AMER1Q5JTC6 1135 aaPredicted RBP31.79■■■□□ 2.68
PRDM13-202ENST00000369215 NPC1L1Q9UHC9 1359 aa31.77■■■□□ 2.68
PRDM13-202ENST00000369215 STAG3Q9UJ98 1225 aa31.77■■■□□ 2.68
PRDM13-202ENST00000369215 ESF1Q9H501 851 aaKnown RBP31.74■■■□□ 2.67
PRDM13-202ENST00000369215 A2ML1A8K2U0 1454 aa31.72■■■□□ 2.67
PRDM13-202ENST00000369215 ZMYM3Q14202 1370 aa31.7■■■□□ 2.67
PRDM13-202ENST00000369215 PPP2R1AP30153 589 aa31.67■■■□□ 2.66
PRDM13-202ENST00000369215 INSRP06213 1382 aa31.66■■■□□ 2.66
PRDM13-202ENST00000369215 SMG6Q86US8 1419 aaKnown RBP31.66■■■□□ 2.66
PRDM13-202ENST00000369215 ALKQ9UM73 1620 aa31.66■■■□□ 2.66
PRDM13-202ENST00000369215 PUS7Q96PZ0 661 aaKnown RBP31.65■■■□□ 2.66
PRDM13-202ENST00000369215 EVC2Q86UK5 1308 aa31.64■■■□□ 2.66
PRDM13-202ENST00000369215 CARD14Q9BXL6 1004 aa31.64■■■□□ 2.66
PRDM13-202ENST00000369215 TULP4Q9NRJ4 1543 aa31.64■■■□□ 2.66
PRDM13-202ENST00000369215 RIMS2Q9UQ26 1411 aa31.63■■■□□ 2.65
PRDM13-202ENST00000369215 SENP3Q9H4L4 574 aaPredicted RBP31.63■■■□□ 2.65
PRDM13-202ENST00000369215 YTHDC2Q9H6S0 1430 aaKnown RBP31.62■■■□□ 2.65
PRDM13-202ENST00000369215 STK26Q9P289 416 aa31.61■■■□□ 2.65
PRDM13-202ENST00000369215 PTPRMP28827 1452 aa31.6■■■□□ 2.65
PRDM13-202ENST00000369215 NUDCQ9Y266 331 aa31.59■■■□□ 2.65
PRDM13-202ENST00000369215 BLMP54132 1417 aaPredicted RBP31.58■■■□□ 2.65
PRDM13-202ENST00000369215 SENP3-EIF4A1A0A087X0R7 540 aa31.56■■■□□ 2.64
PRDM13-202ENST00000369215 SLC12A5Q9H2X9 1139 aa31.56■■■□□ 2.64
PRDM13-202ENST00000369215 TNRQ92752 1358 aa31.55■■■□□ 2.64
PRDM13-202ENST00000369215 NSD3Q9BZ95 1437 aa31.54■■■□□ 2.64
PRDM13-202ENST00000369215 SAFB2Q14151 953 aaKnown RBP eCLIP31.53■■■□□ 2.64
PRDM13-202ENST00000369215 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.51■■■□□ 2.64
PRDM13-202ENST00000369215 SETD1AO15047 1707 aaKnown RBP31.51■■■□□ 2.64
PRDM13-202ENST00000369215 USP32Q8NFA0 1604 aa31.51■■■□□ 2.63
PRDM13-202ENST00000369215 PRAM1Q96QH2 718 aa31.5■■■□□ 2.63
PRDM13-202ENST00000369215 POGKQ9P215 609 aa31.49■■■□□ 2.63
PRDM13-202ENST00000369215 CABP2Q9NPB3 220 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms