RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 KIF1BO60333 1816 aa27.48■■□□□ 1.99
CHTOP-202ENST00000368687 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.47■■□□□ 1.99
CHTOP-202ENST00000368687 CLTCL1P53675 1640 aa27.46■■□□□ 1.99
CHTOP-202ENST00000368687 CHGAP10645 457 aaKnown RBP27.46■■□□□ 1.99
CHTOP-202ENST00000368687 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
CHTOP-202ENST00000368687 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
CHTOP-202ENST00000368687 CPS1P31327 1500 aa27.45■■□□□ 1.98
CHTOP-202ENST00000368687 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
CHTOP-202ENST00000368687 PLEKHG1Q9ULL1 1385 aa27.4■■□□□ 1.98
CHTOP-202ENST00000368687 CCDC144AA2RUR9 1427 aa27.38■■□□□ 1.97
CHTOP-202ENST00000368687 UBAP1LF5GYI3 381 aa27.36■■□□□ 1.97
CHTOP-202ENST00000368687 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
CHTOP-202ENST00000368687 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
CHTOP-202ENST00000368687 STRCP1A6NGW2 1772 aa27.34■■□□□ 1.97
CHTOP-202ENST00000368687 BCANQ96GW7 911 aa27.32■■□□□ 1.96
CHTOP-202ENST00000368687 FOXD1Q16676 465 aa27.3■■□□□ 1.96
CHTOP-202ENST00000368687 RPGRIP1LQ68CZ1 1315 aa27.3■■□□□ 1.96
CHTOP-202ENST00000368687 NEXMIFQ5QGS0 1516 aa27.29■■□□□ 1.96
CHTOP-202ENST00000368687 LRRC7Q96NW7 1537 aa27.27■■□□□ 1.96
CHTOP-202ENST00000368687 SETBP1Q9Y6X0 1596 aa27.26■■□□□ 1.96
CHTOP-202ENST00000368687 SLC26A8Q96RN1 970 aa27.25■■□□□ 1.95
CHTOP-202ENST00000368687 TBX22Q9Y458 520 aa27.25■■□□□ 1.95
CHTOP-202ENST00000368687 PIK3R4Q99570 1358 aa27.24■■□□□ 1.95
CHTOP-202ENST00000368687 NWD1Q149M9 1564 aa27.24■■□□□ 1.95
CHTOP-202ENST00000368687 VGFO15240 615 aaPredicted RBP27.23■■□□□ 1.95
CHTOP-202ENST00000368687 NKTRP30414 1462 aaKnown RBP27.23■■□□□ 1.95
CHTOP-202ENST00000368687 PPLO60437 1756 aa27.22■■□□□ 1.95
CHTOP-202ENST00000368687 KCNA6P17658 529 aa27.22■■□□□ 1.95
CHTOP-202ENST00000368687 NUTM2DQ5VT03 806 aaPredicted RBP27.21■■□□□ 1.95
CHTOP-202ENST00000368687 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
CHTOP-202ENST00000368687 ADAMTS13Q76LX8 1427 aa27.21■■□□□ 1.95
CHTOP-202ENST00000368687 CHD2O14647 1828 aaKnown RBP27.2■■□□□ 1.95
CHTOP-202ENST00000368687 ALKQ9UM73 1620 aa27.2■■□□□ 1.95
CHTOP-202ENST00000368687 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
CHTOP-202ENST00000368687 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
CHTOP-202ENST00000368687 TOM1O60784 492 aa27.18■■□□□ 1.94
CHTOP-202ENST00000368687 NRXN3Q9Y4C0 1643 aa27.18■■□□□ 1.94
CHTOP-202ENST00000368687 PIP4K2BP78356 416 aa27.17■■□□□ 1.94
CHTOP-202ENST00000368687 ANKRD30BQ9BXX2 1392 aa27.17■■□□□ 1.94
CHTOP-202ENST00000368687 IFT172Q9UG01 1749 aa27.15■■□□□ 1.94
CHTOP-202ENST00000368687 SCAF1Q9H7N4 1312 aaKnown RBP27.15■■□□□ 1.94
CHTOP-202ENST00000368687 XIRP1Q702N8 1843 aaKnown RBP27.09■■□□□ 1.93
CHTOP-202ENST00000368687 RGL3Q3MIN7 710 aa27.09■■□□□ 1.93
CHTOP-202ENST00000368687 NCOA3Q9Y6Q9 1424 aa27.08■■□□□ 1.93
CHTOP-202ENST00000368687 TMEM94Q12767 1356 aa27.08■■□□□ 1.93
CHTOP-202ENST00000368687 HSPA1LP34931 641 aa27.07■■□□□ 1.92
CHTOP-202ENST00000368687 PROSER2Q86WR7 435 aaPredicted RBP27.07■■□□□ 1.92
CHTOP-202ENST00000368687 XRN1Q8IZH2 1706 aaKnown RBP27.05■■□□□ 1.92
CHTOP-202ENST00000368687 RBM33Q96EV2 1170 aaKnown RBP27.05■■□□□ 1.92
CHTOP-202ENST00000368687 MYOM2P54296 1465 aa27.05■■□□□ 1.92
CHTOP-202ENST00000368687 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
CHTOP-202ENST00000368687 STAC3Q96MF2 364 aa27.04■■□□□ 1.92
CHTOP-202ENST00000368687 METP08581 1390 aa27.01■■□□□ 1.91
CHTOP-202ENST00000368687 AMOTL2Q9Y2J4 779 aa27.01■■□□□ 1.91
CHTOP-202ENST00000368687 PIK3C2GO75747 1445 aa27■■□□□ 1.91
CHTOP-202ENST00000368687 MSH6P52701 1360 aa27■■□□□ 1.91
CHTOP-202ENST00000368687 LAMC1P11047 1609 aa27■■□□□ 1.91
CHTOP-202ENST00000368687 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
CHTOP-202ENST00000368687 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
CHTOP-202ENST00000368687 DISP3Q9P2K9 1392 aa26.98■■□□□ 1.91
CHTOP-202ENST00000368687 ADGRF5Q8IZF2 1346 aa26.98■■□□□ 1.91
CHTOP-202ENST00000368687 NRXN1Q9ULB1 1477 aa26.98■■□□□ 1.91
CHTOP-202ENST00000368687 PTCH1Q13635 1447 aa26.95■■□□□ 1.9
CHTOP-202ENST00000368687 C14orf37Q86TY3 774 aa26.91■■□□□ 1.9
CHTOP-202ENST00000368687 DCCP43146 1447 aa26.9■■□□□ 1.9
CHTOP-202ENST00000368687 C19orf44Q9H6X5 657 aa26.89■■□□□ 1.9
CHTOP-202ENST00000368687 DHX57Q6P158 1386 aaKnown RBP26.87■■□□□ 1.89
CHTOP-202ENST00000368687 C14orf93Q9H972 538 aaKnown RBP26.87■■□□□ 1.89
CHTOP-202ENST00000368687 FAM135BQ49AJ0 1406 aa26.87■■□□□ 1.89
CHTOP-202ENST00000368687 KNDC1Q76NI1 1749 aa26.87■■□□□ 1.89
CHTOP-202ENST00000368687 CADPS2Q86UW7 1296 aa26.86■■□□□ 1.89
CHTOP-202ENST00000368687 DCAF11Q8TEB1 546 aa26.86■■□□□ 1.89
CHTOP-202ENST00000368687 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.86■■□□□ 1.89
CHTOP-202ENST00000368687 TECPR2O15040 1411 aa26.85■■□□□ 1.89
CHTOP-202ENST00000368687 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
CHTOP-202ENST00000368687 ATF3P18847 181 aa26.84■■□□□ 1.89
CHTOP-202ENST00000368687 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
CHTOP-202ENST00000368687 ILDR2Q71H61 639 aa26.83■■□□□ 1.89
CHTOP-202ENST00000368687 ABCC11Q96J66 1382 aa26.83■■□□□ 1.88
CHTOP-202ENST00000368687 ASXL1Q8IXJ9 1541 aa26.81■■□□□ 1.88
CHTOP-202ENST00000368687 ROBO2Q9HCK4 1378 aa26.81■■□□□ 1.88
CHTOP-202ENST00000368687 YTHDC2Q9H6S0 1430 aaKnown RBP26.81■■□□□ 1.88
CHTOP-202ENST00000368687 MED1Q15648 1581 aaPredicted RBP26.8■■□□□ 1.88
CHTOP-202ENST00000368687 ROBO1Q9Y6N7 1651 aa26.8■■□□□ 1.88
CHTOP-202ENST00000368687 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
CHTOP-202ENST00000368687 SLAIN2Q9P270 581 aa26.79■■□□□ 1.88
CHTOP-202ENST00000368687 KDM2AQ9Y2K7 1162 aa26.79■■□□□ 1.88
CHTOP-202ENST00000368687 CFAP70Q5T0N1 1121 aa26.77■■□□□ 1.88
CHTOP-202ENST00000368687 KIAA1210Q9ULL0 1709 aa26.76■■□□□ 1.88
CHTOP-202ENST00000368687 SIRT1Q96EB6 747 aa26.76■■□□□ 1.87
CHTOP-202ENST00000368687 TMEM132EQ6IEE7 984 aa26.74■■□□□ 1.87
CHTOP-202ENST00000368687 ADGRB1O14514 1584 aa26.73■■□□□ 1.87
CHTOP-202ENST00000368687 DLC1Q96QB1 1528 aa26.73■■□□□ 1.87
CHTOP-202ENST00000368687 STK26Q9P289 416 aa26.72■■□□□ 1.87
CHTOP-202ENST00000368687 CDC42BPGQ6DT37 1551 aa26.71■■□□□ 1.87
CHTOP-202ENST00000368687 MST1RQ04912 1400 aa26.68■■□□□ 1.86
CHTOP-202ENST00000368687 SIN3AQ96ST3 1273 aa26.67■■□□□ 1.86
CHTOP-202ENST00000368687 NEUROD1Q13562 356 aa26.66■■□□□ 1.86
CHTOP-202ENST00000368687 L3MBTL2Q969R5 705 aa26.65■■□□□ 1.86
CHTOP-202ENST00000368687 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms