RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 NRXN1Q9ULB1 1477 aa23.8■■□□□ 1.4
LMNA-205ENST00000368299 ARHGAP31Q2M1Z3 1444 aa23.79■■□□□ 1.4
LMNA-205ENST00000368299 MROH2AA6NES4 1674 aa23.79■■□□□ 1.4
LMNA-205ENST00000368299 SLC24A1O60721 1099 aa23.79■■□□□ 1.4
LMNA-205ENST00000368299 CDCA8Q53HL2 280 aa23.79■■□□□ 1.4
LMNA-205ENST00000368299 YEATS2Q9ULM3 1422 aa23.78■■□□□ 1.4
LMNA-205ENST00000368299 NOS1P29475 1434 aa23.78■■□□□ 1.4
LMNA-205ENST00000368299 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
LMNA-205ENST00000368299 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
LMNA-205ENST00000368299 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
LMNA-205ENST00000368299 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
LMNA-205ENST00000368299 PER1O15534 1290 aaPredicted RBP23.76■■□□□ 1.39
LMNA-205ENST00000368299 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
LMNA-205ENST00000368299 NEFLP07196 543 aa23.75■■□□□ 1.39
LMNA-205ENST00000368299 CNGB1Q14028 1251 aaPredicted RBP23.73■■□□□ 1.39
LMNA-205ENST00000368299 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
LMNA-205ENST00000368299 PARD3Q8TEW0 1356 aa23.73■■□□□ 1.39
LMNA-205ENST00000368299 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
LMNA-205ENST00000368299 CHGAP10645 457 aaKnown RBP23.71■■□□□ 1.39
LMNA-205ENST00000368299 PIK3C2BO00750 1634 aa23.71■■□□□ 1.39
LMNA-205ENST00000368299 PANK3Q9H999 370 aa23.7■■□□□ 1.38
LMNA-205ENST00000368299 SETBP1Q9Y6X0 1596 aa23.7■■□□□ 1.38
LMNA-205ENST00000368299 PPLO60437 1756 aa23.7■■□□□ 1.38
LMNA-205ENST00000368299 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
LMNA-205ENST00000368299 SIGLEC1Q9BZZ2 1709 aa23.69■■□□□ 1.38
LMNA-205ENST00000368299 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
LMNA-205ENST00000368299 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
LMNA-205ENST00000368299 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
LMNA-205ENST00000368299 PIK3C2GO75747 1445 aa23.68■■□□□ 1.38
LMNA-205ENST00000368299 SYNMO15061 1565 aa23.67■■□□□ 1.38
LMNA-205ENST00000368299 FKBP8Q14318 412 aa23.67■■□□□ 1.38
LMNA-205ENST00000368299 SLC52A1Q9NWF4 448 aa23.66■■□□□ 1.38
LMNA-205ENST00000368299 TSPOAP1O95153 1857 aa23.65■■□□□ 1.38
LMNA-205ENST00000368299 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.37
LMNA-205ENST00000368299 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.37
LMNA-205ENST00000368299 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.37
LMNA-205ENST00000368299 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
LMNA-205ENST00000368299 AGLP35573 1532 aa23.63■■□□□ 1.37
LMNA-205ENST00000368299 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
LMNA-205ENST00000368299 VGFO15240 615 aaPredicted RBP23.61■■□□□ 1.37
LMNA-205ENST00000368299 KDM5AP29375 1690 aaKnown RBP23.61■■□□□ 1.37
LMNA-205ENST00000368299 TSHZ2Q9NRE2 1034 aa23.59■■□□□ 1.37
LMNA-205ENST00000368299 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
LMNA-205ENST00000368299 PREX1Q8TCU6 1659 aa23.58■■□□□ 1.37
LMNA-205ENST00000368299 NEXMIFQ5QGS0 1516 aa23.58■■□□□ 1.37
LMNA-205ENST00000368299 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
LMNA-205ENST00000368299 IDI1Q13907 227 aa23.57■■□□□ 1.36
LMNA-205ENST00000368299 CC2D1BQ5T0F9 858 aaKnown RBP23.57■■□□□ 1.36
LMNA-205ENST00000368299 ERVK-7P63135 1459 aa23.57■■□□□ 1.36
LMNA-205ENST00000368299 ZFYVE9O95405 1425 aa23.57■■□□□ 1.36
LMNA-205ENST00000368299 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
LMNA-205ENST00000368299 MYOM1P52179 1685 aa23.55■■□□□ 1.36
LMNA-205ENST00000368299 NPC1L1Q9UHC9 1359 aa23.54■■□□□ 1.36
LMNA-205ENST00000368299 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
LMNA-205ENST00000368299 INSRP06213 1382 aa23.53■■□□□ 1.36
LMNA-205ENST00000368299 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
LMNA-205ENST00000368299 SMG6Q86US8 1419 aaKnown RBP23.51■■□□□ 1.35
LMNA-205ENST00000368299 AMER1Q5JTC6 1135 aaPredicted RBP23.5■■□□□ 1.35
LMNA-205ENST00000368299 TMEM131LA2VDJ0 1609 aa23.5■■□□□ 1.35
LMNA-205ENST00000368299 ARHGEF40Q8TER5 1519 aa23.49■■□□□ 1.35
LMNA-205ENST00000368299 ERICH6BQ5W0A0 696 aa23.49■■□□□ 1.35
LMNA-205ENST00000368299 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
LMNA-205ENST00000368299 BCANQ96GW7 911 aa23.47■■□□□ 1.35
LMNA-205ENST00000368299 QRICH2Q9H0J4 1663 aa23.45■■□□□ 1.35
LMNA-205ENST00000368299 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.35
LMNA-205ENST00000368299 NUDCQ9Y266 331 aa23.45■■□□□ 1.35
LMNA-205ENST00000368299 FBXO31Q5XUX0 539 aaPredicted RBP23.44■■□□□ 1.34
LMNA-205ENST00000368299 CLTCQ00610 1675 aaKnown RBP23.43■■□□□ 1.34
LMNA-205ENST00000368299 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
LMNA-205ENST00000368299 PPP2R1AP30153 589 aa23.42■■□□□ 1.34
LMNA-205ENST00000368299 NUTM2DQ5VT03 806 aaPredicted RBP23.42■■□□□ 1.34
LMNA-205ENST00000368299 SPATA31D1Q6ZQQ2 1576 aa23.41■■□□□ 1.34
LMNA-205ENST00000368299 MYO5BQ9ULV0 1848 aa23.41■■□□□ 1.34
LMNA-205ENST00000368299 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.34
LMNA-205ENST00000368299 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.33
LMNA-205ENST00000368299 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
LMNA-205ENST00000368299 PDE3BQ13370 1112 aa23.37■■□□□ 1.33
LMNA-205ENST00000368299 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
LMNA-205ENST00000368299 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
LMNA-205ENST00000368299 ESF1Q9H501 851 aaKnown RBP23.34■■□□□ 1.33
LMNA-205ENST00000368299 MLECQ14165 292 aa23.33■■□□□ 1.33
LMNA-205ENST00000368299 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
LMNA-205ENST00000368299 IRX6P78412 446 aaPredicted RBP23.31■■□□□ 1.32
LMNA-205ENST00000368299 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
LMNA-205ENST00000368299 RNF123Q5XPI4 1314 aa23.3■■□□□ 1.32
LMNA-205ENST00000368299 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
LMNA-205ENST00000368299 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
LMNA-205ENST00000368299 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
LMNA-205ENST00000368299 ZMYM3Q14202 1370 aa23.28■■□□□ 1.32
LMNA-205ENST00000368299 PPP4R2Q9NY27 417 aa23.28■■□□□ 1.32
LMNA-205ENST00000368299 NSD3Q9BZ95 1437 aa23.28■■□□□ 1.32
LMNA-205ENST00000368299 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
LMNA-205ENST00000368299 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
LMNA-205ENST00000368299 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
LMNA-205ENST00000368299 USP32Q8NFA0 1604 aa23.27■■□□□ 1.32
LMNA-205ENST00000368299 PTPRMP28827 1452 aa23.27■■□□□ 1.32
LMNA-205ENST00000368299 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
LMNA-205ENST00000368299 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
LMNA-205ENST00000368299 STK26Q9P289 416 aa23.25■■□□□ 1.31
LMNA-205ENST00000368299 ANKRD36BQ8N2N9 1353 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms