RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 CCER2I3L3R5 266 aa6.22□□□□□ -1.41
RC3H1-202ENST00000367694 DYNC1I1O14576 645 aa6.22□□□□□ -1.41
RC3H1-202ENST00000367694 CD151P48509 253 aa6.22□□□□□ -1.41
RC3H1-202ENST00000367694 SSR1P43307 286 aaKnown RBP6.21□□□□□ -1.41
RC3H1-202ENST00000367694 MYCBPQ99417 103 aaPredicted RBP6.21□□□□□ -1.41
RC3H1-202ENST00000367694 NOP2P46087 812 aaKnown RBP6.21□□□□□ -1.42
RC3H1-202ENST00000367694 ERCC3P19447 782 aa6.21□□□□□ -1.42
RC3H1-202ENST00000367694 SCP2P22307 547 aa6.21□□□□□ -1.42
RC3H1-202ENST00000367694 MPNDQ8N594 471 aa6.21□□□□□ -1.42
RC3H1-202ENST00000367694 ERBB4Q15303 1308 aa6.21□□□□□ -1.42
RC3H1-202ENST00000367694 NINLQ9Y2I6 1382 aa6.21□□□□□ -1.42
RC3H1-202ENST00000367694 MTMR7Q9Y216 660 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 RAD54L2Q9Y4B4 1467 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 MED4Q9NPJ6 270 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 STK26Q9P289 416 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 CEP126Q9P2H0 1117 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 E9PSI1 815 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 BRMS1Q9HCU9 246 aa6.2□□□□□ -1.42
RC3H1-202ENST00000367694 HNRNPUL2Q1KMD3 747 aaKnown RBP6.19□□□□□ -1.42
RC3H1-202ENST00000367694 RGL3Q3MIN7 710 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 NBPF3Q9H094 633 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 KIF3CO14782 793 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 EP400NLQ6ZTU2 488 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 RNF123Q5XPI4 1314 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 MFAP1P55081 439 aaKnown RBP6.19□□□□□ -1.42
RC3H1-202ENST00000367694 LSM14AQ8ND56 463 aaKnown RBP6.19□□□□□ -1.42
RC3H1-202ENST00000367694 CHMP4CQ96CF2 233 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 SLX1AQ9BQ83 275 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 MTA3Q9BTC8 594 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 SMC4Q9NTJ3 1288 aa6.19□□□□□ -1.42
RC3H1-202ENST00000367694 P3H3Q8IVL6 736 aa6.18□□□□□ -1.42
RC3H1-202ENST00000367694 FAM9BQ8IZU0 186 aa6.18□□□□□ -1.42
RC3H1-202ENST00000367694 HELBQ8NG08 1087 aaPredicted RBP6.18□□□□□ -1.42
RC3H1-202ENST00000367694 ISY1Q9ULR0 285 aaKnown RBP6.18□□□□□ -1.42
RC3H1-202ENST00000367694 CALRP27797 417 aaKnown RBP6.18□□□□□ -1.42
RC3H1-202ENST00000367694 KIAA1211Q6ZU35 1233 aa6.18□□□□□ -1.42
RC3H1-202ENST00000367694 SPINK5Q9NQ38 1064 aaPredicted RBP6.18□□□□□ -1.42
RC3H1-202ENST00000367694 CSPP1Q1MSJ5 1256 aa6.18□□□□□ -1.42
RC3H1-202ENST00000367694 SMC3Q9UQE7 1217 aa6.18□□□□□ -1.42
RC3H1-202ENST00000367694 CEP162Q5TB80 1403 aa6.18□□□□□ -1.42
RC3H1-202ENST00000367694 TESPA1A2RU30 521 aaPredicted RBP6.17□□□□□ -1.42
RC3H1-202ENST00000367694 CDC37Q16543 378 aaPredicted RBP6.17□□□□□ -1.42
RC3H1-202ENST00000367694 NEFHP12036 1026 aa6.17□□□□□ -1.42
RC3H1-202ENST00000367694 JMYQ8N9B5 988 aa6.17□□□□□ -1.42
RC3H1-202ENST00000367694 SYNRGQ9UMZ2 1314 aa6.17□□□□□ -1.42
RC3H1-202ENST00000367694 RAD21O60216 631 aa6.17□□□□□ -1.42
RC3H1-202ENST00000367694 XRCC6P12956 609 aaKnown RBP eCLIP6.17□□□□□ -1.42
RC3H1-202ENST00000367694 GSCP56915 257 aaPredicted RBP6.17□□□□□ -1.42
RC3H1-202ENST00000367694 CTR9Q6PD62 1173 aa6.17□□□□□ -1.42
RC3H1-202ENST00000367694 KCTD17Q8N5Z5 321 aa6.17□□□□□ -1.42
RC3H1-202ENST00000367694 ZNF513Q8N8E2 541 aaPredicted RBP6.17□□□□□ -1.42
RC3H1-202ENST00000367694 EXOC5O00471 708 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 MAMSTRQ6ZN01 415 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 SCAPERQ9BY12 1400 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 CTAGE5O15320 804 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 INHBEP58166 350 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 ATAD2BQ9ULI0 1458 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 WDR62O43379 1518 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 BAZ1AQ9NRL2 1556 aaPredicted RBP6.16□□□□□ -1.42
RC3H1-202ENST00000367694 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
RC3H1-202ENST00000367694 PNISRQ8TF01 805 aaKnown RBP6.16□□□□□ -1.42
RC3H1-202ENST00000367694 GOLGA6CA6NDK9 693 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 GOLGA6BA6NDN3 693 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 GOLGA6DP0CG33 693 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.15□□□□□ -1.42
RC3H1-202ENST00000367694 NLRP13Q86W25 1043 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 GOLGA6AQ9NYA3 693 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 IBTKQ9P2D0 1353 aaPredicted RBP6.15□□□□□ -1.42
RC3H1-202ENST00000367694 PPP1R12AO14974 1030 aaPredicted RBP6.15□□□□□ -1.42
RC3H1-202ENST00000367694 SSFA2P28290 1259 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 GTF2F1P35269 517 aaKnown RBP eCLIP6.15□□□□□ -1.42
RC3H1-202ENST00000367694 ILDR2Q71H61 639 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 SYNPO2Q9UMS6 1093 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 PHF8Q9UPP1 1060 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 PAXBP1Q9Y5B6 917 aa6.15□□□□□ -1.42
RC3H1-202ENST00000367694 MROH2BQ7Z745 1585 aa6.15□□□□□ -1.43
RC3H1-202ENST00000367694 IPO8O15397 1037 aaKnown RBP6.15□□□□□ -1.43
RC3H1-202ENST00000367694 ZNF853P0CG23 659 aa6.15□□□□□ -1.43
RC3H1-202ENST00000367694 MRVI1Q9Y6F6 885 aa6.15□□□□□ -1.43
RC3H1-202ENST00000367694 KIF21AQ7Z4S6 1674 aa6.14□□□□□ -1.43
RC3H1-202ENST00000367694 NPM3O75607 178 aaKnown RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 TMC1Q8TDI8 760 aa6.14□□□□□ -1.43
RC3H1-202ENST00000367694 TEX13AQ9BXU3 409 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 BRD1O95696 1058 aa6.14□□□□□ -1.43
RC3H1-202ENST00000367694 GUCY2CP25092 1073 aa6.14□□□□□ -1.43
RC3H1-202ENST00000367694 GABPB1Q06547 395 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 FOXD4L6Q3SYB3 417 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 FOXD4L3Q6VB84 417 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 ARMCX6Q7L4S7 300 aa6.14□□□□□ -1.43
RC3H1-202ENST00000367694 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 TNIKQ9UKE5 1360 aa6.14□□□□□ -1.43
RC3H1-202ENST00000367694 ZC3H4Q9UPT8 1303 aaKnown RBP6.14□□□□□ -1.43
RC3H1-202ENST00000367694 MS4A1P11836 297 aa6.13□□□□□ -1.43
RC3H1-202ENST00000367694 MCCD1P59942 119 aaPredicted RBP6.13□□□□□ -1.43
RC3H1-202ENST00000367694 TRDNQ13061 729 aa6.13□□□□□ -1.43
RC3H1-202ENST00000367694 MNS1Q8NEH6 495 aa6.13□□□□□ -1.43
RC3H1-202ENST00000367694 RANBP17Q9H2T7 1088 aaKnown RBP6.13□□□□□ -1.43
RC3H1-202ENST00000367694 FAM13BQ9NYF5 915 aa6.13□□□□□ -1.43
RC3H1-202ENST00000367694 CREBRFQ8IUR6 639 aa6.13□□□□□ -1.43
RC3H1-202ENST00000367694 CGNQ9P2M7 1197 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms