RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
RC3H1-202ENST00000367694 MYT1Q01538 1121 aa9.28□□□□□ -0.92
RC3H1-202ENST00000367694 TTBK1Q5TCY1 1321 aaPredicted RBP9.16□□□□□ -0.94
RC3H1-202ENST00000367694 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
RC3H1-202ENST00000367694 APLP2Q06481 763 aa8.84□□□□□ -0.99
RC3H1-202ENST00000367694 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
RC3H1-202ENST00000367694 ERICH6Q7L0X2 663 aa8.6□□□□□ -1.03
RC3H1-202ENST00000367694 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
RC3H1-202ENST00000367694 AEBP2Q6ZN18 517 aaPredicted RBP8.31□□□□□ -1.08
RC3H1-202ENST00000367694 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
RC3H1-202ENST00000367694 FAM9AQ8IZU1 332 aaPredicted RBP8.16□□□□□ -1.1
RC3H1-202ENST00000367694 HRCP23327 699 aa8.12□□□□□ -1.11
RC3H1-202ENST00000367694 SCAF1Q9H7N4 1312 aaKnown RBP8.08□□□□□ -1.12
RC3H1-202ENST00000367694 CHIC1Q5VXU3 224 aa8.08□□□□□ -1.12
RC3H1-202ENST00000367694 NCBP3Q53F19 620 aaKnown RBP8.07□□□□□ -1.12
RC3H1-202ENST00000367694 EIF5BO60841 1220 aaKnown RBP8.02□□□□□ -1.13
RC3H1-202ENST00000367694 ARXQ96QS3 562 aa7.93□□□□□ -1.14
RC3H1-202ENST00000367694 NISCHQ9Y2I1 1504 aa7.9□□□□□ -1.14
RC3H1-202ENST00000367694 UBE2Q2Q8WVN8 375 aa7.9□□□□□ -1.15
RC3H1-202ENST00000367694 CENPBP07199 599 aaPredicted RBP7.82□□□□□ -1.16
RC3H1-202ENST00000367694 PLEKHG5O94827 1062 aa7.76□□□□□ -1.17
RC3H1-202ENST00000367694 ANP32EQ9BTT0 268 aa7.73□□□□□ -1.17
RC3H1-202ENST00000367694 ACIN1Q9UKV3 1341 aaKnown RBP7.64□□□□□ -1.19
RC3H1-202ENST00000367694 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
RC3H1-202ENST00000367694 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
RC3H1-202ENST00000367694 RANGAP1P46060 587 aaPredicted RBP7.61□□□□□ -1.19
RC3H1-202ENST00000367694 RTN4Q9NQC3 1192 aaKnown RBP7.61□□□□□ -1.19
RC3H1-202ENST00000367694 TIMELESSQ9UNS1 1208 aa7.61□□□□□ -1.19
RC3H1-202ENST00000367694 PLPPR3Q6T4P5 718 aa7.56□□□□□ -1.2
RC3H1-202ENST00000367694 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
RC3H1-202ENST00000367694 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
RC3H1-202ENST00000367694 CSRNP3Q8WYN3 585 aa7.56□□□□□ -1.2
RC3H1-202ENST00000367694 PKNOX2Q96KN3 472 aa7.55□□□□□ -1.2
RC3H1-202ENST00000367694 ANO8Q9HCE9 1232 aaPredicted RBP7.54□□□□□ -1.2
RC3H1-202ENST00000367694 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
RC3H1-202ENST00000367694 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
RC3H1-202ENST00000367694 EHMT2Q96KQ7 1210 aa7.48□□□□□ -1.21
RC3H1-202ENST00000367694 CCDC180Q9P1Z9 1646 aa7.48□□□□□ -1.21
RC3H1-202ENST00000367694 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
RC3H1-202ENST00000367694 NEUROD1Q13562 356 aa7.47□□□□□ -1.21
RC3H1-202ENST00000367694 AMER1Q5JTC6 1135 aaPredicted RBP7.47□□□□□ -1.21
RC3H1-202ENST00000367694 ABCC9O60706 1549 aa7.47□□□□□ -1.21
RC3H1-202ENST00000367694 GTF3C3Q9Y5Q9 886 aa7.45□□□□□ -1.22
RC3H1-202ENST00000367694 ZEB1P37275 1124 aaPredicted RBP7.43□□□□□ -1.22
RC3H1-202ENST00000367694 DNAJC5Q9H3Z4 198 aa7.43□□□□□ -1.22
RC3H1-202ENST00000367694 DNAJC5BQ9UF47 199 aa7.43□□□□□ -1.22
RC3H1-202ENST00000367694 NEFLP07196 543 aa7.42□□□□□ -1.22
RC3H1-202ENST00000367694 TRIM41Q8WV44 630 aa7.41□□□□□ -1.22
RC3H1-202ENST00000367694 DCAF8L2P0C7V8 631 aa7.4□□□□□ -1.22
RC3H1-202ENST00000367694 DCAF1Q9Y4B6 1507 aa7.4□□□□□ -1.23
RC3H1-202ENST00000367694 FGD1P98174 961 aa7.39□□□□□ -1.23
RC3H1-202ENST00000367694 PDE4CQ08493 712 aa7.38□□□□□ -1.23
RC3H1-202ENST00000367694 MYO15BQ96JP2 1530 aa7.37□□□□□ -1.23
RC3H1-202ENST00000367694 MYT1LQ9UL68 1186 aa7.35□□□□□ -1.23
RC3H1-202ENST00000367694 TULP1O00294 542 aaPredicted RBP7.35□□□□□ -1.23
RC3H1-202ENST00000367694 TAF7LQ5H9L4 462 aa7.35□□□□□ -1.23
RC3H1-202ENST00000367694 SALL2Q9Y467 1007 aaPredicted RBP7.34□□□□□ -1.24
RC3H1-202ENST00000367694 CLSPNQ9HAW4 1339 aa7.3□□□□□ -1.24
RC3H1-202ENST00000367694 RSPH6AQ9H0K4 717 aa7.3□□□□□ -1.24
RC3H1-202ENST00000367694 FBXO3Q9UK99 471 aa7.29□□□□□ -1.24
RC3H1-202ENST00000367694 AAMPQ13685 434 aa7.29□□□□□ -1.24
RC3H1-202ENST00000367694 RSPH4AQ5TD94 716 aa7.29□□□□□ -1.24
RC3H1-202ENST00000367694 TAOK2Q9UL54 1235 aa7.27□□□□□ -1.25
RC3H1-202ENST00000367694 NPM2Q86SE8 214 aaKnown RBP7.26□□□□□ -1.25
RC3H1-202ENST00000367694 TSHZ2Q9NRE2 1034 aa7.25□□□□□ -1.25
RC3H1-202ENST00000367694 BRD2P25440 801 aaKnown RBP7.23□□□□□ -1.25
RC3H1-202ENST00000367694 CNKSR2Q8WXI2 1034 aa7.23□□□□□ -1.25
RC3H1-202ENST00000367694 BCL11BQ9C0K0 894 aaPredicted RBP7.23□□□□□ -1.25
RC3H1-202ENST00000367694 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
RC3H1-202ENST00000367694 LOC105371045A0A1W2PR82 267 aa7.21□□□□□ -1.26
RC3H1-202ENST00000367694 CHMP4AQ9BY43 222 aa7.19□□□□□ -1.26
RC3H1-202ENST00000367694 PCGF6Q9BYE7 350 aa7.15□□□□□ -1.26
RC3H1-202ENST00000367694 PABPN1Q86U42 306 aaKnown RBP eCLIP7.15□□□□□ -1.27
RC3H1-202ENST00000367694 RBM10P98175 930 aaKnown RBP7.13□□□□□ -1.27
RC3H1-202ENST00000367694 CCDC136Q96JN2 1154 aa7.13□□□□□ -1.27
RC3H1-202ENST00000367694 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
RC3H1-202ENST00000367694 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
RC3H1-202ENST00000367694 KCNA4P22459 653 aa7.12□□□□□ -1.27
RC3H1-202ENST00000367694 ZNF326Q5BKZ1 582 aaKnown RBP7.11□□□□□ -1.27
RC3H1-202ENST00000367694 CHRM1P11229 460 aaPredicted RBP7.11□□□□□ -1.27
RC3H1-202ENST00000367694 BCCIPQ9P287 314 aaKnown RBP eCLIP7.1□□□□□ -1.27
RC3H1-202ENST00000367694 BCANQ96GW7 911 aa7.09□□□□□ -1.28
RC3H1-202ENST00000367694 C14orf37Q86TY3 774 aa7.08□□□□□ -1.28
RC3H1-202ENST00000367694 DEKP35659 375 aaKnown RBP7.06□□□□□ -1.28
RC3H1-202ENST00000367694 FANCIQ9NVI1 1328 aa7.05□□□□□ -1.28
RC3H1-202ENST00000367694 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
RC3H1-202ENST00000367694 DHX37Q8IY37 1157 aaKnown RBP7.05□□□□□ -1.28
RC3H1-202ENST00000367694 SHROOM4Q9ULL8 1493 aa7.04□□□□□ -1.28
RC3H1-202ENST00000367694 MSH5O43196 834 aa7.04□□□□□ -1.28
RC3H1-202ENST00000367694 GLIPR1L2Q4G1C9 344 aa7.04□□□□□ -1.28
RC3H1-202ENST00000367694 C11orf95C9JLR9 678 aaPredicted RBP7.04□□□□□ -1.28
RC3H1-202ENST00000367694 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
RC3H1-202ENST00000367694 TPRNQ4KMQ1 711 aa7.02□□□□□ -1.29
RC3H1-202ENST00000367694 SUPT16HQ9Y5B9 1047 aaKnown RBP7.02□□□□□ -1.29
RC3H1-202ENST00000367694 TRHP20396 242 aaPredicted RBP7.02□□□□□ -1.29
RC3H1-202ENST00000367694 TMEM132AQ24JP5 1023 aa7.01□□□□□ -1.29
RC3H1-202ENST00000367694 TRIM26Q12899 539 aaPredicted RBP7□□□□□ -1.29
RC3H1-202ENST00000367694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.97□□□□□ -1.29
RC3H1-202ENST00000367694 IPO4Q8TEX9 1081 aaKnown RBP6.97□□□□□ -1.29
RC3H1-202ENST00000367694 TEX2Q8IWB9 1127 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms