RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 PLEKHG3A1L390 1219 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 PAX3P23760 479 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 COPB2P35606 906 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 APLP1P51693 650 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 CCDC96Q2M329 555 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 ZNF280DQ6N043 979 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 RBM46Q8TBY0 533 aaKnown RBP6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 HDAC5Q9UQL6 1122 aa6.82□□□□□ -1.32
RNU6-249P-201ENST00000363016 STK25O00506 426 aa6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 WDHD1O75717 1129 aaPredicted RBP6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 DPH6Q7L8W6 267 aa6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 AMOTL1Q8IY63 956 aa6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 EVI5LQ96CN4 794 aa6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 PCMTD1Q96MG8 357 aaPredicted RBP6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 KLHL42Q9P2K6 505 aa6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 WWC3Q9ULE0 1092 aa6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 ZNF330Q9Y3S2 320 aaPredicted RBP6.81□□□□□ -1.32
RNU6-249P-201ENST00000363016 POLD1P28340 1107 aa6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 ANP32AP39687 249 aaKnown RBP6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 HSP90AA2PQ14568 343 aaPredicted RBP6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 NAALADL2Q58DX5 795 aa6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 MSL3Q8N5Y2 521 aaKnown RBP6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 OTUD6BQ8N6M0 293 aa6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 PMM1Q92871 262 aa6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 STAC3Q96MF2 364 aa6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 SBNO2Q9Y2G9 1366 aa6.8□□□□□ -1.32
RNU6-249P-201ENST00000363016 U2SURPO15042 1029 aaKnown RBP6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 EPB41L2O43491 1005 aaKnown RBP6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 RRP9O43818 475 aaKnown RBP6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 IRX3P78415 501 aaPredicted RBP6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 CSPP1Q1MSJ5 1256 aa6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 CC2D1BQ5T0F9 858 aaKnown RBP6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 ARMCX6Q7L4S7 300 aa6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 MKL1Q969V6 931 aa6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 SWAP70Q9UH65 585 aa6.79□□□□□ -1.32
RNU6-249P-201ENST00000363016 ZNF500O60304 480 aaPredicted RBP6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 PARNO95453 639 aaKnown RBP6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 SSFA2P28290 1259 aa6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 PTPROQ16827 1216 aa6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 PABPN1Q86U42 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 FAN1Q9Y2M0 1017 aa6.78□□□□□ -1.32
RNU6-249P-201ENST00000363016 STK10O94804 968 aaKnown RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 SKIV2LQ15477 1246 aaKnown RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 ZKSCAN2Q63HK3 967 aa6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 TXNDC2Q86VQ3 553 aa6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 PPARGC1BQ86YN6 1023 aaKnown RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 GPIHBP1Q8IV16 184 aa6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 HELBQ8NG08 1087 aaPredicted RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 SNRNP27Q8WVK2 155 aaKnown RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 VTI1AQ96AJ9 217 aa6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 SENP7Q9BQF6 1050 aa6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 TMX4Q9H1E5 349 aaPredicted RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 GNL3LQ9NVN8 582 aaKnown RBP6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 SH3BP1Q9Y3L3 701 aa6.77□□□□□ -1.33
RNU6-249P-201ENST00000363016 DHX16O60231 1041 aaKnown RBP6.76□□□□□ -1.33
RNU6-249P-201ENST00000363016 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
RNU6-249P-201ENST00000363016 E2F4Q16254 413 aa6.76□□□□□ -1.33
RNU6-249P-201ENST00000363016 SCYL1Q96KG9 808 aa6.76□□□□□ -1.33
RNU6-249P-201ENST00000363016 CHPF2Q9P2E5 772 aa6.76□□□□□ -1.33
RNU6-249P-201ENST00000363016 FBXO9Q9UK97 447 aaPredicted RBP6.76□□□□□ -1.33
RNU6-249P-201ENST00000363016 TLDC2A0PJX2 215 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 SOX12O15370 315 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 C4orf46Q504U0 113 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 MAMSTRQ6ZN01 415 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 CREBRFQ8IUR6 639 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 ZCRB1Q8TBF4 217 aaKnown RBP6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 KCNB2Q92953 911 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 PBXIP1Q96AQ6 731 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 BCL2L13Q9BXK5 485 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 ARHGEF10LQ9HCE6 1279 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 CEP126Q9P2H0 1117 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 STAG3Q9UJ98 1225 aa6.75□□□□□ -1.33
RNU6-249P-201ENST00000363016 GOLGA6CA6NDK9 693 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 GOLGA6BA6NDN3 693 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 GOLGA6DP0CG33 693 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 SSR1P43307 286 aaKnown RBP6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 BIRC2Q13490 618 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 HSP90AB3PQ58FF7 597 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 GET4Q7L5D6 327 aaPredicted RBP6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 RNF25Q96BH1 459 aaPredicted RBP6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 GPATCH3Q96I76 525 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 CALR3Q96L12 384 aaKnown RBP6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 GOLGA6AQ9NYA3 693 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 STK24Q9Y6E0 443 aa6.74□□□□□ -1.33
RNU6-249P-201ENST00000363016 TCERG1O14776 1098 aaKnown RBP6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 TBC1D12O60347 775 aa6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 GYS2P54840 703 aa6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 POU5F1Q01860 360 aaKnown RBP6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 PDAP1Q13442 181 aaKnown RBP6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 CCDC146Q8IYE0 955 aa6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 TPX2Q9ULW0 747 aaKnown RBP6.73□□□□□ -1.33
RNU6-249P-201ENST00000363016 BDNFP23560 247 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms