RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TOM1O60784 492 aa29.88■■■□□ 2.37
SHISA4-201ENST00000362011 ERVK-7P63135 1459 aa29.87■■■□□ 2.37
SHISA4-201ENST00000362011 HSPA1LP34931 641 aa29.86■■■□□ 2.37
SHISA4-201ENST00000362011 TONSLQ96HA7 1378 aa29.86■■■□□ 2.37
SHISA4-201ENST00000362011 TIMELESSQ9UNS1 1208 aa29.84■■■□□ 2.37
SHISA4-201ENST00000362011 ALKQ9UM73 1620 aa29.84■■■□□ 2.37
SHISA4-201ENST00000362011 IQGAP1P46940 1657 aa29.81■■■□□ 2.36
SHISA4-201ENST00000362011 MYO5BQ9ULV0 1848 aa29.8■■■□□ 2.36
SHISA4-201ENST00000362011 PIP4K2BP78356 416 aa29.78■■■□□ 2.36
SHISA4-201ENST00000362011 MED1Q15648 1581 aaPredicted RBP29.76■■■□□ 2.36
SHISA4-201ENST00000362011 STRCP1A6NGW2 1772 aa29.75■■■□□ 2.35
SHISA4-201ENST00000362011 SCAF1Q9H7N4 1312 aaKnown RBP29.74■■■□□ 2.35
SHISA4-201ENST00000362011 LRRC7Q96NW7 1537 aa29.73■■■□□ 2.35
SHISA4-201ENST00000362011 IFT172Q9UG01 1749 aa29.73■■■□□ 2.35
SHISA4-201ENST00000362011 ADGRB3O60242 1522 aa29.73■■■□□ 2.35
SHISA4-201ENST00000362011 UBR1Q8IWV7 1749 aa29.72■■■□□ 2.35
SHISA4-201ENST00000362011 SPATA31E1Q6ZUB1 1445 aa29.71■■■□□ 2.35
SHISA4-201ENST00000362011 ARHGAP23Q9P227 1491 aa29.7■■■□□ 2.35
SHISA4-201ENST00000362011 TMEM131LA2VDJ0 1609 aa29.69■■■□□ 2.34
SHISA4-201ENST00000362011 SLC52A1Q9NWF4 448 aa29.69■■■□□ 2.34
SHISA4-201ENST00000362011 SLIT1O75093 1534 aa29.68■■■□□ 2.34
SHISA4-201ENST00000362011 L3MBTL2Q969R5 705 aa29.68■■■□□ 2.34
SHISA4-201ENST00000362011 PPLO60437 1756 aa29.67■■■□□ 2.34
SHISA4-201ENST00000362011 KDM5AP29375 1690 aaKnown RBP29.67■■■□□ 2.34
SHISA4-201ENST00000362011 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
SHISA4-201ENST00000362011 LTKP29376 864 aa29.63■■■□□ 2.33
SHISA4-201ENST00000362011 IDI1Q13907 227 aa29.62■■■□□ 2.33
SHISA4-201ENST00000362011 RGL3Q3MIN7 710 aa29.62■■■□□ 2.33
SHISA4-201ENST00000362011 PPP1R15AO75807 674 aaPredicted RBP29.61■■■□□ 2.33
SHISA4-201ENST00000362011 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
SHISA4-201ENST00000362011 TXNDC2Q86VQ3 553 aa29.57■■■□□ 2.32
SHISA4-201ENST00000362011 DCAF11Q8TEB1 546 aa29.55■■■□□ 2.32
SHISA4-201ENST00000362011 NEXMIFQ5QGS0 1516 aa29.53■■■□□ 2.32
SHISA4-201ENST00000362011 TMEM2Q9UHN6 1383 aa29.53■■■□□ 2.32
SHISA4-201ENST00000362011 ZNF326Q5BKZ1 582 aaKnown RBP29.52■■■□□ 2.32
SHISA4-201ENST00000362011 STAG3Q9UJ98 1225 aa29.51■■■□□ 2.32
SHISA4-201ENST00000362011 MYOM2P54296 1465 aa29.51■■■□□ 2.31
SHISA4-201ENST00000362011 XIRP1Q702N8 1843 aaKnown RBP29.51■■■□□ 2.31
SHISA4-201ENST00000362011 TRPM1Q7Z4N2 1603 aa29.5■■■□□ 2.31
SHISA4-201ENST00000362011 KDM2AQ9Y2K7 1162 aa29.49■■■□□ 2.31
SHISA4-201ENST00000362011 EID1Q9Y6B2 187 aa29.49■■■□□ 2.31
SHISA4-201ENST00000362011 RPGRIP1LQ68CZ1 1315 aa29.49■■■□□ 2.31
SHISA4-201ENST00000362011 STAC3Q96MF2 364 aa29.48■■■□□ 2.31
SHISA4-201ENST00000362011 KIAA1210Q9ULL0 1709 aa29.47■■■□□ 2.31
SHISA4-201ENST00000362011 PRAG1Q86YV5 1406 aa29.45■■■□□ 2.31
SHISA4-201ENST00000362011 NBPF8Q3BBV2 869 aa29.44■■■□□ 2.3
SHISA4-201ENST00000362011 PHF23Q9BUL5 403 aaPredicted RBP29.44■■■□□ 2.3
SHISA4-201ENST00000362011 FAM135BQ49AJ0 1406 aa29.41■■■□□ 2.3
SHISA4-201ENST00000362011 RALGAPBQ86X10 1494 aa29.4■■■□□ 2.3
SHISA4-201ENST00000362011 NRXN1Q9ULB1 1477 aa29.4■■■□□ 2.3
SHISA4-201ENST00000362011 LAMC1P11047 1609 aa29.38■■■□□ 2.29
SHISA4-201ENST00000362011 KCNA6P17658 529 aa29.38■■■□□ 2.29
SHISA4-201ENST00000362011 RIMS2Q9UQ26 1411 aa29.38■■■□□ 2.29
SHISA4-201ENST00000362011 ZFYVE9O95405 1425 aa29.37■■■□□ 2.29
SHISA4-201ENST00000362011 TMEM94Q12767 1356 aa29.36■■■□□ 2.29
SHISA4-201ENST00000362011 SENP3Q9H4L4 574 aaPredicted RBP29.35■■■□□ 2.29
SHISA4-201ENST00000362011 RGS17Q9UGC6 210 aaPredicted RBP29.35■■■□□ 2.29
SHISA4-201ENST00000362011 VGFO15240 615 aaPredicted RBP29.34■■■□□ 2.29
SHISA4-201ENST00000362011 ADGRF5Q8IZF2 1346 aa29.33■■■□□ 2.29
SHISA4-201ENST00000362011 PIK3C2GO75747 1445 aa29.32■■■□□ 2.28
SHISA4-201ENST00000362011 NWD1Q149M9 1564 aa29.31■■■□□ 2.28
SHISA4-201ENST00000362011 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.3■■■□□ 2.28
SHISA4-201ENST00000362011 SLC26A8Q96RN1 970 aa29.29■■■□□ 2.28
SHISA4-201ENST00000362011 NKTRP30414 1462 aaKnown RBP29.29■■■□□ 2.28
SHISA4-201ENST00000362011 HDGFP51858 240 aaKnown RBP29.28■■■□□ 2.28
SHISA4-201ENST00000362011 NUTM2DQ5VT03 806 aaPredicted RBP29.28■■■□□ 2.28
SHISA4-201ENST00000362011 SETBP1Q9Y6X0 1596 aa29.26■■■□□ 2.27
SHISA4-201ENST00000362011 ROCK2O75116 1388 aaKnown RBP29.26■■■□□ 2.27
SHISA4-201ENST00000362011 SETD1AO15047 1707 aaKnown RBP29.25■■■□□ 2.27
SHISA4-201ENST00000362011 NRXN3Q9Y4C0 1643 aa29.25■■■□□ 2.27
SHISA4-201ENST00000362011 PROSER2Q86WR7 435 aaPredicted RBP29.24■■■□□ 2.27
SHISA4-201ENST00000362011 ROBO1Q9Y6N7 1651 aa29.23■■■□□ 2.27
SHISA4-201ENST00000362011 GPRASP1Q5JY77 1395 aa29.22■■■□□ 2.27
SHISA4-201ENST00000362011 PLEKHG1Q9ULL1 1385 aa29.2■■■□□ 2.26
SHISA4-201ENST00000362011 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
SHISA4-201ENST00000362011 NBPF1Q3BBV0 1214 aa29.18■■■□□ 2.26
SHISA4-201ENST00000362011 CFAP70Q5T0N1 1121 aa29.18■■■□□ 2.26
SHISA4-201ENST00000362011 CARD11Q9BXL7 1154 aa29.18■■■□□ 2.26
SHISA4-201ENST00000362011 C14orf93Q9H972 538 aaKnown RBP29.17■■■□□ 2.26
SHISA4-201ENST00000362011 CHD2O14647 1828 aaKnown RBP29.15■■■□□ 2.26
SHISA4-201ENST00000362011 ADGRB1O14514 1584 aa29.15■■■□□ 2.26
SHISA4-201ENST00000362011 MSH6P52701 1360 aa29.14■■■□□ 2.26
SHISA4-201ENST00000362011 EIF4G2P78344 907 aaKnown RBP eCLIP29.13■■■□□ 2.25
SHISA4-201ENST00000362011 ASXL1Q8IXJ9 1541 aa29.12■■■□□ 2.25
SHISA4-201ENST00000362011 DIP2AQ14689 1571 aa29.12■■■□□ 2.25
SHISA4-201ENST00000362011 POTEAQ6S8J7 498 aa29.12■■■□□ 2.25
SHISA4-201ENST00000362011 SLAIN2Q9P270 581 aa29.12■■■□□ 2.25
SHISA4-201ENST00000362011 NCOA3Q9Y6Q9 1424 aa29.12■■■□□ 2.25
SHISA4-201ENST00000362011 USP47Q96K76 1375 aa29.12■■■□□ 2.25
SHISA4-201ENST00000362011 TBX22Q9Y458 520 aa29.11■■■□□ 2.25
SHISA4-201ENST00000362011 ARHGEF28Q8N1W1 1705 aaKnown RBP29.1■■■□□ 2.25
SHISA4-201ENST00000362011 HSPA5P11021 654 aaKnown RBP29.08■■■□□ 2.25
SHISA4-201ENST00000362011 KNDC1Q76NI1 1749 aa29.08■■■□□ 2.25
SHISA4-201ENST00000362011 BCANQ96GW7 911 aa29.07■■■□□ 2.24
SHISA4-201ENST00000362011 ZNF316A6NFI3 1004 aaPredicted RBP29.06■■■□□ 2.24
SHISA4-201ENST00000362011 ADAMTS13Q76LX8 1427 aa29.06■■■□□ 2.24
SHISA4-201ENST00000362011 PHLPP1O60346 1717 aa29.03■■■□□ 2.24
SHISA4-201ENST00000362011 PIK3R4Q99570 1358 aa29.03■■■□□ 2.24
SHISA4-201ENST00000362011 JCADQ9P266 1359 aa29.03■■■□□ 2.24
SHISA4-201ENST00000362011 QRICH2Q9H0J4 1663 aa29.01■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms