RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.138e-7■■□□□ 14.3
SMC3-201ENST00000361804 CCDC144AA2RUR9 1427 aa14.25□□□□□ -0.13
SMC3-201ENST00000361804 SYNMO15061 1565 aa14.24□□□□□ -0.13
SMC3-201ENST00000361804 KIF1BO60333 1816 aa14.24□□□□□ -0.13
SMC3-201ENST00000361804 PLIN1O60240 522 aa14.24□□□□□ -0.13
SMC3-201ENST00000361804 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
SMC3-201ENST00000361804 DIP2CQ9Y2E4 1556 aa14.23□□□□□ -0.13
SMC3-201ENST00000361804 ADGRB3O60242 1522 aa14.23□□□□□ -0.13
SMC3-201ENST00000361804 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
SMC3-201ENST00000361804 RNF123Q5XPI4 1314 aa14.21□□□□□ -0.13
SMC3-201ENST00000361804 CAMSAP1Q5T5Y3 1602 aa14.21□□□□□ -0.14
SMC3-201ENST00000361804 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.14
SMC3-201ENST00000361804 ROCK2O75116 1388 aaKnown RBP14.2□□□□□ -0.14
SMC3-201ENST00000361804 POGZQ7Z3K3 1410 aa14.2□□□□□ -0.14
SMC3-201ENST00000361804 ADGRB1O14514 1584 aa14.19□□□□□ -0.14
SMC3-201ENST00000361804 EFCAB2Q5VUJ9 269 aa14.18□□□□□ -0.14
SMC3-201ENST00000361804 MYBBP1AQ9BQG0 1328 aaKnown RBP14.18□□□□□ -0.14
SMC3-201ENST00000361804 RRP1P56182 461 aaKnown RBP14.18□□□□□ -0.14
SMC3-201ENST00000361804 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
SMC3-201ENST00000361804 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
SMC3-201ENST00000361804 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
SMC3-201ENST00000361804 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
SMC3-201ENST00000361804 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
SMC3-201ENST00000361804 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
SMC3-201ENST00000361804 CFAP74Q9C0B2 1584 aa14.16□□□□□ -0.14
SMC3-201ENST00000361804 RCAN3Q9UKA8 241 aa14.16□□□□□ -0.14
SMC3-201ENST00000361804 ANP32AP39687 249 aaKnown RBP14.16□□□□□ -0.14
SMC3-201ENST00000361804 ABCC3O15438 1527 aa14.16□□□□□ -0.14
SMC3-201ENST00000361804 NPATQ14207 1427 aa14.15□□□□□ -0.14
SMC3-201ENST00000361804 MYOM2P54296 1465 aa14.15□□□□□ -0.14
SMC3-201ENST00000361804 IPO9Q96P70 1041 aaKnown RBP14.14□□□□□ -0.15
SMC3-201ENST00000361804 LAS1LQ9Y4W2 734 aaKnown RBP14.14□□□□□ -0.15
SMC3-201ENST00000361804 KIF13AQ9H1H9 1805 aa14.14□□□□□ -0.15
SMC3-201ENST00000361804 SPAG9O60271 1321 aaKnown RBP14.14□□□□□ -0.15
SMC3-201ENST00000361804 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
SMC3-201ENST00000361804 ASXL1Q8IXJ9 1541 aa14.13□□□□□ -0.15
SMC3-201ENST00000361804 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
SMC3-201ENST00000361804 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
SMC3-201ENST00000361804 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
SMC3-201ENST00000361804 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 PANK3Q9H999 370 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
SMC3-201ENST00000361804 C20orf194Q5TEA3 1177 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 ERVK-7P63135 1459 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 GLI2P10070 1586 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 NEXMIFQ5QGS0 1516 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 RALBP1Q15311 655 aa14.11□□□□□ -0.15
SMC3-201ENST00000361804 QRICH2Q9H0J4 1663 aa14.1□□□□□ -0.15
SMC3-201ENST00000361804 NLRP13Q86W25 1043 aa14.1□□□□□ -0.15
SMC3-201ENST00000361804 KTN1Q86UP2 1357 aaKnown RBP14.09□□□□□ -0.15
SMC3-201ENST00000361804 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
SMC3-201ENST00000361804 PREX1Q8TCU6 1659 aa14.09□□□□□ -0.15
SMC3-201ENST00000361804 CD109Q6YHK3 1445 aa14.08□□□□□ -0.15
SMC3-201ENST00000361804 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
SMC3-201ENST00000361804 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.16
SMC3-201ENST00000361804 KDM5AP29375 1690 aaKnown RBP14.08□□□□□ -0.16
SMC3-201ENST00000361804 PDE4AP27815 886 aa14.08□□□□□ -0.16
SMC3-201ENST00000361804 TMEM131LA2VDJ0 1609 aa14.08□□□□□ -0.16
SMC3-201ENST00000361804 PIK3C2GO75747 1445 aa14.07□□□□□ -0.16
SMC3-201ENST00000361804 NOS1P29475 1434 aa14.07□□□□□ -0.16
SMC3-201ENST00000361804 ADGRF5Q8IZF2 1346 aa14.07□□□□□ -0.16
SMC3-201ENST00000361804 ZMYM4Q5VZL5 1548 aa14.06□□□□□ -0.16
SMC3-201ENST00000361804 SCAF11Q99590 1463 aaKnown RBP14.05□□□□□ -0.16
SMC3-201ENST00000361804 SLC4A3P48751 1232 aa14.05□□□□□ -0.16
SMC3-201ENST00000361804 BLMP54132 1417 aaPredicted RBP14.04□□□□□ -0.16
SMC3-201ENST00000361804 TSPOAP1O95153 1857 aa14.04□□□□□ -0.16
SMC3-201ENST00000361804 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
SMC3-201ENST00000361804 ADAMTS8Q9UP79 889 aa14.04□□□□□ -0.16
SMC3-201ENST00000361804 NEO1Q92859 1461 aa14.04□□□□□ -0.16
SMC3-201ENST00000361804 RTL5Q5HYW3 569 aaPredicted RBP14.02□□□□□ -0.17
SMC3-201ENST00000361804 BACH2Q9BYV9 841 aa14.01□□□□□ -0.17
SMC3-201ENST00000361804 KIF3BO15066 747 aa14.01□□□□□ -0.17
SMC3-201ENST00000361804 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
SMC3-201ENST00000361804 CCDC146Q8IYE0 955 aa14□□□□□ -0.17
SMC3-201ENST00000361804 RAPGEF3O95398 923 aa14□□□□□ -0.17
SMC3-201ENST00000361804 AMER1Q5JTC6 1135 aaPredicted RBP14□□□□□ -0.17
SMC3-201ENST00000361804 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
SMC3-201ENST00000361804 NRXN3Q9Y4C0 1643 aa14□□□□□ -0.17
SMC3-201ENST00000361804 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
SMC3-201ENST00000361804 USP32Q8NFA0 1604 aa13.98□□□□□ -0.17
SMC3-201ENST00000361804 NEFMP07197 916 aa13.98□□□□□ -0.17
SMC3-201ENST00000361804 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
SMC3-201ENST00000361804 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
SMC3-201ENST00000361804 REREQ9P2R6 1566 aa13.97□□□□□ -0.17
SMC3-201ENST00000361804 TMF1P82094 1093 aa13.96□□□□□ -0.17
SMC3-201ENST00000361804 CFAP70Q5T0N1 1121 aa13.96□□□□□ -0.17
SMC3-201ENST00000361804 CARD14Q9BXL6 1004 aa13.96□□□□□ -0.17
SMC3-201ENST00000361804 CLTCQ00610 1675 aaKnown RBP13.96□□□□□ -0.17
SMC3-201ENST00000361804 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
SMC3-201ENST00000361804 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
SMC3-201ENST00000361804 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
SMC3-201ENST00000361804 PPP2R1AP30153 589 aa13.94□□□□□ -0.18
SMC3-201ENST00000361804 RGS3P49796 1198 aa13.93□□□□□ -0.18
SMC3-201ENST00000361804 PTPRMP28827 1452 aa13.93□□□□□ -0.18
SMC3-201ENST00000361804 MYT1LQ9UL68 1186 aa13.92□□□□□ -0.18
SMC3-201ENST00000361804 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
SMC3-201ENST00000361804 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
SMC3-201ENST00000361804 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMC3-201ENST00000361804 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
SMC3-201ENST00000361804 DUSP27Q5VZP5 1158 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms