RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
HPS1-204ENST00000361490 GGNBP2Q9H3C7 697 aa15.45■□□□□ 0.06
HPS1-204ENST00000361490 EVC2Q86UK5 1308 aa15.44■□□□□ 0.06
HPS1-204ENST00000361490 ABCA9Q8IUA7 1624 aa15.44■□□□□ 0.06
HPS1-204ENST00000361490 RIMBP3CA6NJZ7 1639 aa15.44■□□□□ 0.06
HPS1-204ENST00000361490 RIMBP3BA6NNM3 1639 aa15.44■□□□□ 0.06
HPS1-204ENST00000361490 RIMBP3Q9UFD9 1639 aa15.44■□□□□ 0.06
HPS1-204ENST00000361490 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
HPS1-204ENST00000361490 RRP7AQ9Y3A4 280 aaKnown RBP15.43■□□□□ 0.06
HPS1-204ENST00000361490 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
HPS1-204ENST00000361490 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
HPS1-204ENST00000361490 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
HPS1-204ENST00000361490 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
HPS1-204ENST00000361490 NEO1Q92859 1461 aa15.42■□□□□ 0.06
HPS1-204ENST00000361490 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
HPS1-204ENST00000361490 ADAMTS8Q9UP79 889 aa15.42■□□□□ 0.06
HPS1-204ENST00000361490 UHRF1BP1Q6BDS2 1440 aa15.42■□□□□ 0.06
HPS1-204ENST00000361490 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
HPS1-204ENST00000361490 CANXP27824 592 aaKnown RBP15.4■□□□□ 0.06
HPS1-204ENST00000361490 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
HPS1-204ENST00000361490 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.06
HPS1-204ENST00000361490 PLXNC1O60486 1568 aa15.39■□□□□ 0.05
HPS1-204ENST00000361490 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
HPS1-204ENST00000361490 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
HPS1-204ENST00000361490 CDCA7LQ96GN5 454 aa15.39■□□□□ 0.05
HPS1-204ENST00000361490 CABP1Q9NZU7 370 aa15.39■□□□□ 0.05
HPS1-204ENST00000361490 PRDM15P57071 1507 aaPredicted RBP15.39■□□□□ 0.05
HPS1-204ENST00000361490 MLH3Q9UHC1 1453 aa15.39■□□□□ 0.05
HPS1-204ENST00000361490 CFAP53Q96M91 514 aa15.38■□□□□ 0.05
HPS1-204ENST00000361490 RPGRIP1LQ68CZ1 1315 aa15.38■□□□□ 0.05
HPS1-204ENST00000361490 CDK19Q9BWU1 502 aa15.37■□□□□ 0.05
HPS1-204ENST00000361490 SCAF11Q99590 1463 aaKnown RBP15.37■□□□□ 0.05
HPS1-204ENST00000361490 KDM5DQ9BY66 1539 aa15.37■□□□□ 0.05
HPS1-204ENST00000361490 NEFMP07197 916 aa15.37■□□□□ 0.05
HPS1-204ENST00000361490 FBLN1P23142 703 aa15.37■□□□□ 0.05
HPS1-204ENST00000361490 APAF1O14727 1248 aa15.37■□□□□ 0.05
HPS1-204ENST00000361490 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
HPS1-204ENST00000361490 TERF2IPQ9NYB0 399 aa15.36■□□□□ 0.05
HPS1-204ENST00000361490 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
HPS1-204ENST00000361490 ARAP3Q8WWN8 1544 aa15.35■□□□□ 0.05
HPS1-204ENST00000361490 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
HPS1-204ENST00000361490 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
HPS1-204ENST00000361490 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
HPS1-204ENST00000361490 MTHFSP49914 203 aa15.35■□□□□ 0.05
HPS1-204ENST00000361490 PLIN1O60240 522 aa15.34■□□□□ 0.05
HPS1-204ENST00000361490 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
HPS1-204ENST00000361490 CGNL1Q0VF96 1302 aa15.33■□□□□ 0.05
HPS1-204ENST00000361490 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.04
HPS1-204ENST00000361490 HECW2Q9P2P5 1572 aa15.33■□□□□ 0.04
HPS1-204ENST00000361490 IQGAP3Q86VI3 1631 aa15.33■□□□□ 0.04
HPS1-204ENST00000361490 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
HPS1-204ENST00000361490 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.04
HPS1-204ENST00000361490 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
HPS1-204ENST00000361490 NUDCQ9Y266 331 aa15.32■□□□□ 0.04
HPS1-204ENST00000361490 UNC13BO14795 1591 aa15.32■□□□□ 0.04
HPS1-204ENST00000361490 PTPRTO14522 1441 aa15.32■□□□□ 0.04
HPS1-204ENST00000361490 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
HPS1-204ENST00000361490 KIDINS220Q9ULH0 1771 aa15.31■□□□□ 0.04
HPS1-204ENST00000361490 NGDNQ8NEJ9 315 aaKnown RBP15.3■□□□□ 0.04
HPS1-204ENST00000361490 BRD4O60885 1362 aaPredicted RBP15.3■□□□□ 0.04
HPS1-204ENST00000361490 COL17A1Q9UMD9 1497 aaPredicted RBP15.3■□□□□ 0.04
HPS1-204ENST00000361490 E9PCH4 1651 aa15.29■□□□□ 0.04
HPS1-204ENST00000361490 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
HPS1-204ENST00000361490 FRAT1Q92837 279 aaPredicted RBP15.29■□□□□ 0.04
HPS1-204ENST00000361490 NSD3Q9BZ95 1437 aa15.29■□□□□ 0.04
HPS1-204ENST00000361490 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
HPS1-204ENST00000361490 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
HPS1-204ENST00000361490 BCORL1Q5H9F3 1711 aa15.28■□□□□ 0.04
HPS1-204ENST00000361490 RCAN3Q9UKA8 241 aa15.28■□□□□ 0.04
HPS1-204ENST00000361490 KDM5CP41229 1560 aa15.28■□□□□ 0.04
HPS1-204ENST00000361490 TRPM2O94759 1503 aa15.28■□□□□ 0.04
HPS1-204ENST00000361490 INO80Q9ULG1 1556 aaPredicted RBP15.27■□□□□ 0.04
HPS1-204ENST00000361490 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.04
HPS1-204ENST00000361490 TNRQ92752 1358 aa15.27■□□□□ 0.03
HPS1-204ENST00000361490 THEMISQ8N1K5 641 aaPredicted RBP15.26■□□□□ 0.03
HPS1-204ENST00000361490 ABCC3O15438 1527 aa15.26■□□□□ 0.03
HPS1-204ENST00000361490 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 EFCAB6Q5THR3 1501 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 HMOX1P09601 288 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 CEP152O94986 1710 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
HPS1-204ENST00000361490 ABCA6Q8N139 1617 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
HPS1-204ENST00000361490 LTKP29376 864 aa15.23■□□□□ 0.03
HPS1-204ENST00000361490 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
HPS1-204ENST00000361490 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
HPS1-204ENST00000361490 TET3O43151 1660 aa15.23■□□□□ 0.03
HPS1-204ENST00000361490 AMOTL2Q9Y2J4 779 aa15.23■□□□□ 0.03
HPS1-204ENST00000361490 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
HPS1-204ENST00000361490 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
HPS1-204ENST00000361490 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
HPS1-204ENST00000361490 ZRANB1Q9UGI0 708 aa15.22■□□□□ 0.03
HPS1-204ENST00000361490 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
HPS1-204ENST00000361490 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
HPS1-204ENST00000361490 NME9Q86XW9 330 aa15.2■□□□□ 0.02
HPS1-204ENST00000361490 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
HPS1-204ENST00000361490 COG3Q96JB2 828 aa15.2■□□□□ 0.02
HPS1-204ENST00000361490 RNF17Q9BXT8 1623 aaKnown RBP15.19■□□□□ 0.02
HPS1-204ENST00000361490 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms