RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
GTF3C2-202ENST00000359541 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
GTF3C2-202ENST00000359541 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
GTF3C2-202ENST00000359541 CEP152O94986 1710 aa12.34□□□□□ -0.43
GTF3C2-202ENST00000359541 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
GTF3C2-202ENST00000359541 RCAN3Q9UKA8 241 aa12.34□□□□□ -0.43
GTF3C2-202ENST00000359541 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
GTF3C2-202ENST00000359541 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
GTF3C2-202ENST00000359541 NEURL4Q96JN8 1562 aa12.33□□□□□ -0.44
GTF3C2-202ENST00000359541 CLTCL1P53675 1640 aa12.33□□□□□ -0.44
GTF3C2-202ENST00000359541 VWDEQ8N2E2 1590 aa12.32□□□□□ -0.44
GTF3C2-202ENST00000359541 MYOM2P54296 1465 aa12.32□□□□□ -0.44
GTF3C2-202ENST00000359541 SENP3-EIF4A1A0A087X0R7 540 aa12.31□□□□□ -0.44
GTF3C2-202ENST00000359541 RRP1P56182 461 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-202ENST00000359541 GGT6Q6P531 493 aa12.31□□□□□ -0.44
GTF3C2-202ENST00000359541 FANCIQ9NVI1 1328 aa12.31□□□□□ -0.44
GTF3C2-202ENST00000359541 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-202ENST00000359541 EFCAB6Q5THR3 1501 aa12.3□□□□□ -0.44
GTF3C2-202ENST00000359541 SYNMO15061 1565 aa12.3□□□□□ -0.44
GTF3C2-202ENST00000359541 POGZQ7Z3K3 1410 aa12.29□□□□□ -0.44
GTF3C2-202ENST00000359541 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
GTF3C2-202ENST00000359541 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
GTF3C2-202ENST00000359541 KIAA1210Q9ULL0 1709 aa12.29□□□□□ -0.44
GTF3C2-202ENST00000359541 RPGRIP1LQ68CZ1 1315 aa12.29□□□□□ -0.44
GTF3C2-202ENST00000359541 LMTK2Q8IWU2 1503 aa12.29□□□□□ -0.44
GTF3C2-202ENST00000359541 PPP2R1AP30153 589 aa12.28□□□□□ -0.44
GTF3C2-202ENST00000359541 NPC1L1Q9UHC9 1359 aa12.28□□□□□ -0.44
GTF3C2-202ENST00000359541 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
GTF3C2-202ENST00000359541 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-202ENST00000359541 MLH3Q9UHC1 1453 aa12.28□□□□□ -0.44
GTF3C2-202ENST00000359541 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-202ENST00000359541 KIF1BO60333 1816 aa12.27□□□□□ -0.44
GTF3C2-202ENST00000359541 CENPJQ9HC77 1338 aaPredicted RBP12.27□□□□□ -0.45
GTF3C2-202ENST00000359541 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
GTF3C2-202ENST00000359541 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
GTF3C2-202ENST00000359541 ADGRF5Q8IZF2 1346 aa12.26□□□□□ -0.45
GTF3C2-202ENST00000359541 NEO1Q92859 1461 aa12.26□□□□□ -0.45
GTF3C2-202ENST00000359541 PIK3C2GO75747 1445 aa12.25□□□□□ -0.45
GTF3C2-202ENST00000359541 NGEFQ8N5V2 710 aa12.25□□□□□ -0.45
GTF3C2-202ENST00000359541 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-202ENST00000359541 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
GTF3C2-202ENST00000359541 HECW2Q9P2P5 1572 aa12.25□□□□□ -0.45
GTF3C2-202ENST00000359541 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
GTF3C2-202ENST00000359541 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
GTF3C2-202ENST00000359541 SBNO2Q9Y2G9 1366 aa12.24□□□□□ -0.45
GTF3C2-202ENST00000359541 NOS1P29475 1434 aa12.24□□□□□ -0.45
GTF3C2-202ENST00000359541 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-202ENST00000359541 MROH1Q8NDA8 1641 aa12.24□□□□□ -0.45
GTF3C2-202ENST00000359541 GOLGA2Q08379 1002 aa12.23□□□□□ -0.45
GTF3C2-202ENST00000359541 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
GTF3C2-202ENST00000359541 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
GTF3C2-202ENST00000359541 NPATQ14207 1427 aa12.21□□□□□ -0.45
GTF3C2-202ENST00000359541 TRAK1Q9UPV9 953 aa12.21□□□□□ -0.45
GTF3C2-202ENST00000359541 ABCA6Q8N139 1617 aa12.21□□□□□ -0.46
GTF3C2-202ENST00000359541 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.46
GTF3C2-202ENST00000359541 ADGRB3O60242 1522 aa12.21□□□□□ -0.46
GTF3C2-202ENST00000359541 C14orf93Q9H972 538 aaKnown RBP12.2□□□□□ -0.46
GTF3C2-202ENST00000359541 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
GTF3C2-202ENST00000359541 EIF5BO60841 1220 aaKnown RBP12.2□□□□□ -0.46
GTF3C2-202ENST00000359541 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
GTF3C2-202ENST00000359541 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
GTF3C2-202ENST00000359541 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
GTF3C2-202ENST00000359541 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 NRXN1Q9ULB1 1477 aa12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 EVC2Q86UK5 1308 aa12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 SLC52A1Q9NWF4 448 aa12.19□□□□□ -0.46
GTF3C2-202ENST00000359541 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
GTF3C2-202ENST00000359541 RAPGEF3O95398 923 aa12.18□□□□□ -0.46
GTF3C2-202ENST00000359541 ABCC3O15438 1527 aa12.18□□□□□ -0.46
GTF3C2-202ENST00000359541 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
GTF3C2-202ENST00000359541 PUS7Q96PZ0 661 aaKnown RBP12.16□□□□□ -0.46
GTF3C2-202ENST00000359541 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
GTF3C2-202ENST00000359541 E9PSI1 815 aa12.15□□□□□ -0.46
GTF3C2-202ENST00000359541 NSD3Q9BZ95 1437 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 IFT172Q9UG01 1749 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 MS4A1P11836 297 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 FRMPD1Q5SYB0 1578 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 ARHGAP31Q2M1Z3 1444 aa12.14□□□□□ -0.47
GTF3C2-202ENST00000359541 APAF1O14727 1248 aa12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 MROH2AA6NES4 1674 aa12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 POLR3AO14802 1390 aaPredicted RBP12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 CRBNQ96SW2 442 aa12.13□□□□□ -0.47
GTF3C2-202ENST00000359541 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 MYOM1P52179 1685 aa12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 PLIN1O60240 522 aa12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 DUSP27Q5VZP5 1158 aa12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 NSD2O96028 1365 aa12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 SLFN5Q08AF3 891 aa12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 NOP58Q9Y2X3 529 aaKnown RBP12.12□□□□□ -0.47
GTF3C2-202ENST00000359541 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
GTF3C2-202ENST00000359541 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
GTF3C2-202ENST00000359541 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms