RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
VCP-201ENST00000358901 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
VCP-201ENST00000358901 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.37e-7■■■■□ 23.7
VCP-201ENST00000358901 EID1Q9Y6B2 187 aa16.94■□□□□ 0.3
VCP-201ENST00000358901 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
VCP-201ENST00000358901 C22orf23Q9BZE7 217 aa16.93■□□□□ 0.3
VCP-201ENST00000358901 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
VCP-201ENST00000358901 MTHFSP49914 203 aa16.93■□□□□ 0.3
VCP-201ENST00000358901 CSPP1Q1MSJ5 1256 aa16.93■□□□□ 0.3
VCP-201ENST00000358901 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
VCP-201ENST00000358901 PHF14O94880 888 aa16.92■□□□□ 0.3
VCP-201ENST00000358901 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
VCP-201ENST00000358901 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
VCP-201ENST00000358901 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
VCP-201ENST00000358901 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
VCP-201ENST00000358901 CFAP70Q5T0N1 1121 aa16.92■□□□□ 0.3
VCP-201ENST00000358901 HSP90AA2PQ14568 343 aaPredicted RBP16.91■□□□□ 0.3
VCP-201ENST00000358901 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
VCP-201ENST00000358901 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
VCP-201ENST00000358901 REC8O95072 547 aa16.91■□□□□ 0.3
VCP-201ENST00000358901 HMOX1P09601 288 aa16.9■□□□□ 0.3
VCP-201ENST00000358901 AFAP1Q8N556 730 aa16.89■□□□□ 0.29
VCP-201ENST00000358901 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
VCP-201ENST00000358901 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
VCP-201ENST00000358901 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
VCP-201ENST00000358901 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
VCP-201ENST00000358901 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
VCP-201ENST00000358901 BCAR3O75815 825 aa16.87■□□□□ 0.29
VCP-201ENST00000358901 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
VCP-201ENST00000358901 ANO2Q9NQ90 1003 aa16.86■□□□□ 0.29
VCP-201ENST00000358901 TEFQ10587 303 aa16.85■□□□□ 0.29
VCP-201ENST00000358901 AAMPQ13685 434 aa16.85■□□□□ 0.29
VCP-201ENST00000358901 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
VCP-201ENST00000358901 GNAI1P63096 354 aa16.85■□□□□ 0.29
VCP-201ENST00000358901 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
VCP-201ENST00000358901 ATP6V1DQ9Y5K8 247 aa16.85■□□□□ 0.29
VCP-201ENST00000358901 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
VCP-201ENST00000358901 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
VCP-201ENST00000358901 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
VCP-201ENST00000358901 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.29
VCP-201ENST00000358901 TPM4P67936 248 aa16.83■□□□□ 0.29
VCP-201ENST00000358901 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.29
VCP-201ENST00000358901 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.28
VCP-201ENST00000358901 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
VCP-201ENST00000358901 C11orf95C9JLR9 678 aaPredicted RBP16.82■□□□□ 0.28
VCP-201ENST00000358901 PDE3AQ14432 1141 aa16.82■□□□□ 0.28
VCP-201ENST00000358901 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
VCP-201ENST00000358901 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
VCP-201ENST00000358901 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
VCP-201ENST00000358901 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
VCP-201ENST00000358901 BRPF3Q9ULD4 1205 aa16.81■□□□□ 0.28
VCP-201ENST00000358901 H3BQV1 296 aa16.81■□□□□ 0.28
VCP-201ENST00000358901 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
VCP-201ENST00000358901 INTS3Q68E01 1043 aaKnown RBP16.81■□□□□ 0.28
VCP-201ENST00000358901 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
VCP-201ENST00000358901 NAIPQ13075 1403 aa16.8■□□□□ 0.28
VCP-201ENST00000358901 NUCB2P80303 420 aa16.8■□□□□ 0.28
VCP-201ENST00000358901 FAM184AQ8NB25 1140 aa16.8■□□□□ 0.28
VCP-201ENST00000358901 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
VCP-201ENST00000358901 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
VCP-201ENST00000358901 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
VCP-201ENST00000358901 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
VCP-201ENST00000358901 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
VCP-201ENST00000358901 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
VCP-201ENST00000358901 RUFY2Q8WXA3 655 aa16.78■□□□□ 0.28
VCP-201ENST00000358901 TRAK2O60296 914 aa16.77■□□□□ 0.28
VCP-201ENST00000358901 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.28
VCP-201ENST00000358901 TOP2BQ02880 1626 aa16.77■□□□□ 0.28
VCP-201ENST00000358901 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.28
VCP-201ENST00000358901 BECN2A8MW95 431 aa16.77■□□□□ 0.28
VCP-201ENST00000358901 C1orf141Q5JVX7 400 aa16.77■□□□□ 0.28
VCP-201ENST00000358901 IL27Q8NEV9 243 aa16.77■□□□□ 0.28
VCP-201ENST00000358901 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.27
VCP-201ENST00000358901 GOLGA6L19H0YKK7 550 aa16.77■□□□□ 0.27
VCP-201ENST00000358901 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
VCP-201ENST00000358901 CDC45O75419 566 aa16.76■□□□□ 0.27
VCP-201ENST00000358901 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
VCP-201ENST00000358901 FAM43AQ8N2R8 423 aa16.76■□□□□ 0.27
VCP-201ENST00000358901 PRKAR2BP31323 418 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 MRE11P49959 708 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 IFIT2P09913 472 aaKnown RBP16.75■□□□□ 0.27
VCP-201ENST00000358901 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 MSH5O43196 834 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 NEXNQ0ZGT2 675 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■■□□ 16.9
VCP-201ENST00000358901 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 VPS37CA5D8V6 355 aaPredicted RBP16.75■□□□□ 0.27
VCP-201ENST00000358901 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
VCP-201ENST00000358901 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
VCP-201ENST00000358901 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
VCP-201ENST00000358901 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
VCP-201ENST00000358901 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
VCP-201ENST00000358901 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
VCP-201ENST00000358901 SMC3Q9UQE7 1217 aa16.72■□□□□ 0.27
VCP-201ENST00000358901 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
VCP-201ENST00000358901 TROQ12816 1431 aaPredicted RBP16.71■□□□□ 0.27
VCP-201ENST00000358901 NESP48681 1621 aa16.71■□□□□ 0.27
VCP-201ENST00000358901 RNF214Q8ND24 703 aa16.71■□□□□ 0.27
VCP-201ENST00000358901 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms