RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 AFAP1Q8N556 730 aa23.47■■□□□ 1.35
GYPC-202ENST00000356887 NOP58Q9Y2X3 529 aaKnown RBP23.47■■□□□ 1.35
GYPC-202ENST00000356887 SCAPERQ9BY12 1400 aa23.46■■□□□ 1.35
GYPC-202ENST00000356887 DEPDC5O75140 1603 aa23.46■■□□□ 1.35
GYPC-202ENST00000356887 FAM69CQ0P6D2 419 aa23.45■■□□□ 1.34
GYPC-202ENST00000356887 CLTCL1P53675 1640 aa23.45■■□□□ 1.34
GYPC-202ENST00000356887 SCAF11Q99590 1463 aaKnown RBP23.44■■□□□ 1.34
GYPC-202ENST00000356887 KIF13AQ9H1H9 1805 aa23.43■■□□□ 1.34
GYPC-202ENST00000356887 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
GYPC-202ENST00000356887 TET3O43151 1660 aa23.42■■□□□ 1.34
GYPC-202ENST00000356887 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
GYPC-202ENST00000356887 CDCA8Q53HL2 280 aa23.41■■□□□ 1.34
GYPC-202ENST00000356887 PPP2R1AP30153 589 aa23.4■■□□□ 1.34
GYPC-202ENST00000356887 AMER1Q5JTC6 1135 aaPredicted RBP23.4■■□□□ 1.34
GYPC-202ENST00000356887 ADAMTS8Q9UP79 889 aa23.4■■□□□ 1.34
GYPC-202ENST00000356887 SYNMO15061 1565 aa23.4■■□□□ 1.34
GYPC-202ENST00000356887 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
GYPC-202ENST00000356887 TCERG1O14776 1098 aaKnown RBP23.4■■□□□ 1.34
GYPC-202ENST00000356887 ANP32AP39687 249 aaKnown RBP23.4■■□□□ 1.34
GYPC-202ENST00000356887 NEO1Q92859 1461 aa23.4■■□□□ 1.34
GYPC-202ENST00000356887 IPO9Q96P70 1041 aaKnown RBP23.39■■□□□ 1.34
GYPC-202ENST00000356887 PAK3O75914 559 aaPredicted RBP23.39■■□□□ 1.33
GYPC-202ENST00000356887 INO80Q9ULG1 1556 aaPredicted RBP23.38■■□□□ 1.33
GYPC-202ENST00000356887 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
GYPC-202ENST00000356887 MYT1LQ9UL68 1186 aa23.37■■□□□ 1.33
GYPC-202ENST00000356887 KANK1Q14678 1352 aa23.37■■□□□ 1.33
GYPC-202ENST00000356887 ATP7AQ04656 1500 aa23.36■■□□□ 1.33
GYPC-202ENST00000356887 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
GYPC-202ENST00000356887 NEURL4Q96JN8 1562 aa23.36■■□□□ 1.33
GYPC-202ENST00000356887 PLIN1O60240 522 aa23.35■■□□□ 1.33
GYPC-202ENST00000356887 ZNF518AQ6AHZ1 1483 aa23.35■■□□□ 1.33
GYPC-202ENST00000356887 ASXL1Q8IXJ9 1541 aa23.34■■□□□ 1.33
GYPC-202ENST00000356887 POGZQ7Z3K3 1410 aa23.34■■□□□ 1.33
GYPC-202ENST00000356887 NPC1L1Q9UHC9 1359 aa23.33■■□□□ 1.33
GYPC-202ENST00000356887 MYOM1P52179 1685 aa23.33■■□□□ 1.33
GYPC-202ENST00000356887 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
GYPC-202ENST00000356887 MS4A1P11836 297 aa23.32■■□□□ 1.32
GYPC-202ENST00000356887 WDR43Q15061 677 aaKnown RBP eCLIP23.32■■□□□ 1.32
GYPC-202ENST00000356887 KIDINS220Q9ULH0 1771 aa23.31■■□□□ 1.32
GYPC-202ENST00000356887 CRBNQ96SW2 442 aa23.31■■□□□ 1.32
GYPC-202ENST00000356887 PIK3C2GO75747 1445 aa23.31■■□□□ 1.32
GYPC-202ENST00000356887 PLEKHH1Q9ULM0 1364 aa23.3■■□□□ 1.32
GYPC-202ENST00000356887 KIF3BO15066 747 aa23.3■■□□□ 1.32
GYPC-202ENST00000356887 ZNF521Q96K83 1311 aa23.29■■□□□ 1.32
GYPC-202ENST00000356887 RICTORQ6R327 1708 aa23.29■■□□□ 1.32
GYPC-202ENST00000356887 PDE4AP27815 886 aa23.28■■□□□ 1.32
GYPC-202ENST00000356887 MROH1Q8NDA8 1641 aa23.28■■□□□ 1.32
GYPC-202ENST00000356887 ZBTB47Q9UFB7 747 aaPredicted RBP23.28■■□□□ 1.32
GYPC-202ENST00000356887 DUSP27Q5VZP5 1158 aa23.27■■□□□ 1.32
GYPC-202ENST00000356887 MYOM2P54296 1465 aa23.27■■□□□ 1.32
GYPC-202ENST00000356887 KDM5AP29375 1690 aaKnown RBP23.27■■□□□ 1.32
GYPC-202ENST00000356887 HECW2Q9P2P5 1572 aa23.26■■□□□ 1.31
GYPC-202ENST00000356887 BACH2Q9BYV9 841 aa23.26■■□□□ 1.31
GYPC-202ENST00000356887 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
GYPC-202ENST00000356887 RAPGEF3O95398 923 aa23.24■■□□□ 1.31
GYPC-202ENST00000356887 CFAP70Q5T0N1 1121 aa23.24■■□□□ 1.31
GYPC-202ENST00000356887 ABCA6Q8N139 1617 aa23.23■■□□□ 1.31
GYPC-202ENST00000356887 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
GYPC-202ENST00000356887 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
GYPC-202ENST00000356887 FRMPD1Q5SYB0 1578 aa23.22■■□□□ 1.31
GYPC-202ENST00000356887 UGGT1Q9NYU2 1555 aa23.22■■□□□ 1.31
GYPC-202ENST00000356887 ERVK-7P63135 1459 aa23.22■■□□□ 1.31
GYPC-202ENST00000356887 MLH3Q9UHC1 1453 aa23.22■■□□□ 1.31
GYPC-202ENST00000356887 ADGRF5Q8IZF2 1346 aa23.22■■□□□ 1.31
GYPC-202ENST00000356887 KIF1BO60333 1816 aa23.22■■□□□ 1.31
GYPC-202ENST00000356887 EFCAB6Q5THR3 1501 aa23.21■■□□□ 1.31
GYPC-202ENST00000356887 IFT172Q9UG01 1749 aa23.2■■□□□ 1.3
GYPC-202ENST00000356887 SLFN5Q08AF3 891 aa23.2■■□□□ 1.3
GYPC-202ENST00000356887 TRMT2AQ8IZ69 625 aaKnown RBP23.19■■□□□ 1.3
GYPC-202ENST00000356887 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
GYPC-202ENST00000356887 NBR1Q14596 966 aa23.18■■□□□ 1.3
GYPC-202ENST00000356887 KDM2BQ8NHM5 1336 aa23.17■■□□□ 1.3
GYPC-202ENST00000356887 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
GYPC-202ENST00000356887 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
GYPC-202ENST00000356887 CARD14Q9BXL6 1004 aa23.16■■□□□ 1.3
GYPC-202ENST00000356887 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
GYPC-202ENST00000356887 MROH2AA6NES4 1674 aa23.15■■□□□ 1.3
GYPC-202ENST00000356887 DEKP35659 375 aaKnown RBP23.15■■□□□ 1.3
GYPC-202ENST00000356887 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
GYPC-202ENST00000356887 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
GYPC-202ENST00000356887 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
GYPC-202ENST00000356887 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
GYPC-202ENST00000356887 APAF1O14727 1248 aa23.11■■□□□ 1.29
GYPC-202ENST00000356887 CENPQQ7L2Z9 268 aaPredicted RBP23.11■■□□□ 1.29
GYPC-202ENST00000356887 SKAP1Q86WV1 359 aa23.11■■□□□ 1.29
GYPC-202ENST00000356887 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
GYPC-202ENST00000356887 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
GYPC-202ENST00000356887 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
GYPC-202ENST00000356887 SPINK5Q9NQ38 1064 aaPredicted RBP23.09■■□□□ 1.29
GYPC-202ENST00000356887 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
GYPC-202ENST00000356887 NOS1P29475 1434 aa23.07■■□□□ 1.28
GYPC-202ENST00000356887 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
GYPC-202ENST00000356887 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
GYPC-202ENST00000356887 CENPJQ9HC77 1338 aaPredicted RBP23.06■■□□□ 1.28
GYPC-202ENST00000356887 E9PSI1 815 aa23.05■■□□□ 1.28
GYPC-202ENST00000356887 POLR3AO14802 1390 aaPredicted RBP23.05■■□□□ 1.28
GYPC-202ENST00000356887 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
GYPC-202ENST00000356887 PPLO60437 1756 aa23.02■■□□□ 1.28
GYPC-202ENST00000356887 RTL5Q5HYW3 569 aaPredicted RBP23.01■■□□□ 1.27
GYPC-202ENST00000356887 NPATQ14207 1427 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms