RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
FDPS-201ENST00000356657 EID1Q9Y6B2 187 aa23.29■■□□□ 1.32
FDPS-201ENST00000356657 MED14O60244 1454 aa23.28■■□□□ 1.32
FDPS-201ENST00000356657 RIMS2Q9UQ26 1411 aa23.27■■□□□ 1.32
FDPS-201ENST00000356657 NEXMIFQ5QGS0 1516 aa23.26■■□□□ 1.31
FDPS-201ENST00000356657 PPLO60437 1756 aa23.26■■□□□ 1.31
FDPS-201ENST00000356657 IFT172Q9UG01 1749 aa23.25■■□□□ 1.31
FDPS-201ENST00000356657 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
FDPS-201ENST00000356657 NCKAP5LQ9HCH0 1330 aa23.24■■□□□ 1.31
FDPS-201ENST00000356657 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
FDPS-201ENST00000356657 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
FDPS-201ENST00000356657 TXNDC2Q86VQ3 553 aa23.21■■□□□ 1.31
FDPS-201ENST00000356657 MYOM2P54296 1465 aa23.19■■□□□ 1.3
FDPS-201ENST00000356657 VGFO15240 615 aaPredicted RBP23.19■■□□□ 1.3
FDPS-201ENST00000356657 PLEKHG1Q9ULL1 1385 aa23.19■■□□□ 1.3
FDPS-201ENST00000356657 NPHP4O75161 1426 aaPredicted RBP23.19■■□□□ 1.3
FDPS-201ENST00000356657 PPP1R15AO75807 674 aaPredicted RBP23.18■■□□□ 1.3
FDPS-201ENST00000356657 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
FDPS-201ENST00000356657 LTKP29376 864 aa23.17■■□□□ 1.3
FDPS-201ENST00000356657 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
FDPS-201ENST00000356657 RGL3Q3MIN7 710 aa23.16■■□□□ 1.3
FDPS-201ENST00000356657 SETBP1Q9Y6X0 1596 aa23.16■■□□□ 1.3
FDPS-201ENST00000356657 NRXN1Q9ULB1 1477 aa23.13■■□□□ 1.29
FDPS-201ENST00000356657 SIN3AQ96ST3 1273 aa23.11■■□□□ 1.29
FDPS-201ENST00000356657 LAMC1P11047 1609 aa23.11■■□□□ 1.29
FDPS-201ENST00000356657 TIMELESSQ9UNS1 1208 aa23.11■■□□□ 1.29
FDPS-201ENST00000356657 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
FDPS-201ENST00000356657 NEUROD1Q13562 356 aa23.09■■□□□ 1.29
FDPS-201ENST00000356657 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
FDPS-201ENST00000356657 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
FDPS-201ENST00000356657 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
FDPS-201ENST00000356657 PIK3R4Q99570 1358 aa23.06■■□□□ 1.28
FDPS-201ENST00000356657 CERKQ8TCT0 537 aa23.05■■□□□ 1.28
FDPS-201ENST00000356657 ADAMTS13Q76LX8 1427 aa23.05■■□□□ 1.28
FDPS-201ENST00000356657 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
FDPS-201ENST00000356657 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
FDPS-201ENST00000356657 BCANQ96GW7 911 aa23.04■■□□□ 1.28
FDPS-201ENST00000356657 ZNF335Q9H4Z2 1342 aaPredicted RBP23.03■■□□□ 1.28
FDPS-201ENST00000356657 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
FDPS-201ENST00000356657 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
FDPS-201ENST00000356657 KIAA1210Q9ULL0 1709 aa23.03■■□□□ 1.28
FDPS-201ENST00000356657 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
FDPS-201ENST00000356657 ALKQ9UM73 1620 aa23.02■■□□□ 1.28
FDPS-201ENST00000356657 LTBP4Q8N2S1 1624 aa23.01■■□□□ 1.27
FDPS-201ENST00000356657 ILDR1Q86SU0 546 aaPredicted RBP23.01■■□□□ 1.27
FDPS-201ENST00000356657 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
FDPS-201ENST00000356657 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
FDPS-201ENST00000356657 NWD1Q149M9 1564 aa22.98■■□□□ 1.27
FDPS-201ENST00000356657 FBXO41Q8TF61 875 aa22.98■■□□□ 1.27
FDPS-201ENST00000356657 SLC26A8Q96RN1 970 aa22.97■■□□□ 1.27
FDPS-201ENST00000356657 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
FDPS-201ENST00000356657 C14orf93Q9H972 538 aaKnown RBP22.96■■□□□ 1.27
FDPS-201ENST00000356657 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
FDPS-201ENST00000356657 CPS1P31327 1500 aa22.95■■□□□ 1.26
FDPS-201ENST00000356657 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
FDPS-201ENST00000356657 KCNA6P17658 529 aa22.92■■□□□ 1.26
FDPS-201ENST00000356657 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
FDPS-201ENST00000356657 METP08581 1390 aa22.9■■□□□ 1.26
FDPS-201ENST00000356657 KNDC1Q76NI1 1749 aa22.9■■□□□ 1.26
FDPS-201ENST00000356657 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
FDPS-201ENST00000356657 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
FDPS-201ENST00000356657 ASXL1Q8IXJ9 1541 aa22.89■■□□□ 1.25
FDPS-201ENST00000356657 IQSEC2Q5JU85 1478 aa22.89■■□□□ 1.25
FDPS-201ENST00000356657 TECPR2O15040 1411 aa22.88■■□□□ 1.25
FDPS-201ENST00000356657 PTCH1Q13635 1447 aa22.88■■□□□ 1.25
FDPS-201ENST00000356657 STRCP1A6NGW2 1772 aa22.87■■□□□ 1.25
FDPS-201ENST00000356657 CFAP70Q5T0N1 1121 aa22.87■■□□□ 1.25
FDPS-201ENST00000356657 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
FDPS-201ENST00000356657 RALGAPBQ86X10 1494 aa22.86■■□□□ 1.25
FDPS-201ENST00000356657 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
FDPS-201ENST00000356657 ABCC11Q96J66 1382 aa22.84■■□□□ 1.25
FDPS-201ENST00000356657 PTPRUQ92729 1446 aa22.84■■□□□ 1.25
FDPS-201ENST00000356657 NCOA3Q9Y6Q9 1424 aa22.83■■□□□ 1.25
FDPS-201ENST00000356657 DLC1Q96QB1 1528 aa22.83■■□□□ 1.25
FDPS-201ENST00000356657 AMOTL2Q9Y2J4 779 aa22.83■■□□□ 1.25
FDPS-201ENST00000356657 GPRASP1Q5JY77 1395 aa22.82■■□□□ 1.24
FDPS-201ENST00000356657 ROCK2O75116 1388 aaKnown RBP22.8■■□□□ 1.24
FDPS-201ENST00000356657 FAM135BQ49AJ0 1406 aa22.8■■□□□ 1.24
FDPS-201ENST00000356657 SIRT1Q96EB6 747 aa22.79■■□□□ 1.24
FDPS-201ENST00000356657 LRRC7Q96NW7 1537 aa22.79■■□□□ 1.24
FDPS-201ENST00000356657 NBPF8Q3BBV2 869 aa22.78■■□□□ 1.24
FDPS-201ENST00000356657 TMEM132EQ6IEE7 984 aa22.77■■□□□ 1.24
FDPS-201ENST00000356657 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
FDPS-201ENST00000356657 ARHGEF28Q8N1W1 1705 aaKnown RBP22.76■■□□□ 1.23
FDPS-201ENST00000356657 XIRP1Q702N8 1843 aaKnown RBP22.74■■□□□ 1.23
FDPS-201ENST00000356657 PROSER2Q86WR7 435 aaPredicted RBP22.74■■□□□ 1.23
FDPS-201ENST00000356657 EIF3AQ14152 1382 aaKnown RBP22.74■■□□□ 1.23
FDPS-201ENST00000356657 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
FDPS-201ENST00000356657 ROBO2Q9HCK4 1378 aa22.73■■□□□ 1.23
FDPS-201ENST00000356657 NBPF1Q3BBV0 1214 aa22.73■■□□□ 1.23
FDPS-201ENST00000356657 STK26Q9P289 416 aa22.71■■□□□ 1.23
FDPS-201ENST00000356657 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
FDPS-201ENST00000356657 DCCP43146 1447 aa22.7■■□□□ 1.22
FDPS-201ENST00000356657 ADGRL3Q9HAR2 1447 aa22.69■■□□□ 1.22
FDPS-201ENST00000356657 CARD11Q9BXL7 1154 aa22.69■■□□□ 1.22
FDPS-201ENST00000356657 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
FDPS-201ENST00000356657 MSH6P52701 1360 aa22.68■■□□□ 1.22
FDPS-201ENST00000356657 TOM1O60784 492 aa22.67■■□□□ 1.22
FDPS-201ENST00000356657 TRAK1Q9UPV9 953 aa22.67■■□□□ 1.22
FDPS-201ENST00000356657 NALCNQ8IZF0 1738 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms