RNA–Protein interactions for RNA: ENST00000356208.9

RBM38-203, Transcript of RNA binding motif protein 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM38, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-203ENST00000356208 IQGAP1P46940 1657 aa30.06■■■□□ 2.4
RBM38-203ENST00000356208 CCER2I3L3R5 266 aa30.06■■■□□ 2.4
RBM38-203ENST00000356208 CLTCQ00610 1675 aaKnown RBP30.05■■■□□ 2.4
RBM38-203ENST00000356208 NRXN1Q9ULB1 1477 aa30.03■■■□□ 2.4
RBM38-203ENST00000356208 MLECQ14165 292 aa30.03■■■□□ 2.4
RBM38-203ENST00000356208 PPP6R1Q9UPN7 881 aa30.03■■■□□ 2.4
RBM38-203ENST00000356208 IDI1Q13907 227 aa30■■■□□ 2.39
RBM38-203ENST00000356208 TESK2Q96S53 571 aa30■■■□□ 2.39
RBM38-203ENST00000356208 CFAP70Q5T0N1 1121 aa29.99■■■□□ 2.39
RBM38-203ENST00000356208 FBXO31Q5XUX0 539 aaPredicted RBP29.99■■■□□ 2.39
RBM38-203ENST00000356208 SCAF11Q99590 1463 aaKnown RBP29.98■■■□□ 2.39
RBM38-203ENST00000356208 SLC52A1Q9NWF4 448 aa29.98■■■□□ 2.39
RBM38-203ENST00000356208 ERVK-7P63135 1459 aa29.97■■■□□ 2.39
RBM38-203ENST00000356208 RPGRIP1LQ68CZ1 1315 aa29.96■■■□□ 2.39
RBM38-203ENST00000356208 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
RBM38-203ENST00000356208 MYO5BQ9ULV0 1848 aa29.95■■■□□ 2.39
RBM38-203ENST00000356208 DISP3Q9P2K9 1392 aa29.94■■■□□ 2.38
RBM38-203ENST00000356208 NEXMIFQ5QGS0 1516 aa29.93■■■□□ 2.38
RBM38-203ENST00000356208 PIK3C2GO75747 1445 aa29.93■■■□□ 2.38
RBM38-203ENST00000356208 PRKRIP1Q9H875 184 aaPredicted RBP29.93■■■□□ 2.38
RBM38-203ENST00000356208 TMEM131LA2VDJ0 1609 aa29.91■■■□□ 2.38
RBM38-203ENST00000356208 TMF1P82094 1093 aa29.88■■■□□ 2.37
RBM38-203ENST00000356208 NUTM2DQ5VT03 806 aaPredicted RBP29.87■■■□□ 2.37
RBM38-203ENST00000356208 SPATA31D1Q6ZQQ2 1576 aa29.87■■■□□ 2.37
RBM38-203ENST00000356208 SETBP1Q9Y6X0 1596 aa29.86■■■□□ 2.37
RBM38-203ENST00000356208 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
RBM38-203ENST00000356208 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
RBM38-203ENST00000356208 ESF1Q9H501 851 aaKnown RBP29.83■■■□□ 2.37
RBM38-203ENST00000356208 C14orf93Q9H972 538 aaKnown RBP29.83■■■□□ 2.37
RBM38-203ENST00000356208 VGFO15240 615 aaPredicted RBP29.83■■■□□ 2.37
RBM38-203ENST00000356208 ADGRB1O14514 1584 aa29.8■■■□□ 2.36
RBM38-203ENST00000356208 ZMYM3Q14202 1370 aa29.8■■■□□ 2.36
RBM38-203ENST00000356208 CNGB1Q14028 1251 aaPredicted RBP29.78■■■□□ 2.36
RBM38-203ENST00000356208 ZFYVE9O95405 1425 aa29.78■■■□□ 2.36
RBM38-203ENST00000356208 CCDC184Q52MB2 194 aa29.77■■■□□ 2.36
RBM38-203ENST00000356208 MYO3AQ8NEV4 1616 aa29.75■■■□□ 2.35
RBM38-203ENST00000356208 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
RBM38-203ENST00000356208 STAG3Q9UJ98 1225 aa29.75■■■□□ 2.35
RBM38-203ENST00000356208 TRAK1Q9UPV9 953 aa29.71■■■□□ 2.35
RBM38-203ENST00000356208 GTF3C3Q9Y5Q9 886 aa29.71■■■□□ 2.35
RBM38-203ENST00000356208 A2ML1A8K2U0 1454 aa29.71■■■□□ 2.35
RBM38-203ENST00000356208 SENP3Q9H4L4 574 aaPredicted RBP29.69■■■□□ 2.34
RBM38-203ENST00000356208 CDCA8Q53HL2 280 aa29.68■■■□□ 2.34
RBM38-203ENST00000356208 MRS2Q9HD23 443 aa29.68■■■□□ 2.34
RBM38-203ENST00000356208 PER1O15534 1290 aaPredicted RBP29.67■■■□□ 2.34
RBM38-203ENST00000356208 KDM5AP29375 1690 aaKnown RBP29.66■■■□□ 2.34
RBM38-203ENST00000356208 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
RBM38-203ENST00000356208 PANK3Q9H999 370 aa29.66■■■□□ 2.34
RBM38-203ENST00000356208 SBNO2Q9Y2G9 1366 aa29.65■■■□□ 2.34
RBM38-203ENST00000356208 QRICH2Q9H0J4 1663 aa29.65■■■□□ 2.34
RBM38-203ENST00000356208 MYOM1P52179 1685 aa29.64■■■□□ 2.34
RBM38-203ENST00000356208 ASXL1Q8IXJ9 1541 aa29.64■■■□□ 2.33
RBM38-203ENST00000356208 ARHGEF28Q8N1W1 1705 aaKnown RBP29.62■■■□□ 2.33
RBM38-203ENST00000356208 TNRQ92752 1358 aa29.62■■■□□ 2.33
RBM38-203ENST00000356208 SLC24A1O60721 1099 aa29.62■■■□□ 2.33
RBM38-203ENST00000356208 RIMS2Q9UQ26 1411 aa29.6■■■□□ 2.33
RBM38-203ENST00000356208 KTN1Q86UP2 1357 aaKnown RBP29.58■■■□□ 2.33
RBM38-203ENST00000356208 ALKQ9UM73 1620 aa29.57■■■□□ 2.32
RBM38-203ENST00000356208 FER1L4A9Z1Z3 1794 aa29.57■■■□□ 2.32
RBM38-203ENST00000356208 RALBP1Q15311 655 aa29.56■■■□□ 2.32
RBM38-203ENST00000356208 FAM9BQ8IZU0 186 aa29.55■■■□□ 2.32
RBM38-203ENST00000356208 C3P01024 1663 aa29.54■■■□□ 2.32
RBM38-203ENST00000356208 CEBPAP49715 358 aaPredicted RBP29.54■■■□□ 2.32
RBM38-203ENST00000356208 PARD3Q8TEW0 1356 aa29.54■■■□□ 2.32
RBM38-203ENST00000356208 UBR1Q8IWV7 1749 aa29.53■■■□□ 2.32
RBM38-203ENST00000356208 MYBBP1AQ9BQG0 1328 aaKnown RBP29.52■■■□□ 2.32
RBM38-203ENST00000356208 STK26Q9P289 416 aa29.52■■■□□ 2.32
RBM38-203ENST00000356208 HNRNPUQ00839 825 aaKnown RBP eCLIP29.51■■■□□ 2.31
RBM38-203ENST00000356208 CC2D1BQ5T0F9 858 aaKnown RBP29.5■■■□□ 2.31
RBM38-203ENST00000356208 YTHDC2Q9H6S0 1430 aaKnown RBP29.49■■■□□ 2.31
RBM38-203ENST00000356208 SETD1AO15047 1707 aaKnown RBP29.48■■■□□ 2.31
RBM38-203ENST00000356208 PTPRMP28827 1452 aa29.47■■■□□ 2.31
RBM38-203ENST00000356208 KNSTRNQ9Y448 316 aa29.46■■■□□ 2.31
RBM38-203ENST00000356208 NRXN3Q9Y4C0 1643 aa29.46■■■□□ 2.31
RBM38-203ENST00000356208 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.45■■■□□ 2.31
RBM38-203ENST00000356208 TMC1Q8TDI8 760 aa29.45■■■□□ 2.31
RBM38-203ENST00000356208 NLRP1Q9C000 1473 aa29.44■■■□□ 2.3
RBM38-203ENST00000356208 TULP4Q9NRJ4 1543 aa29.44■■■□□ 2.3
RBM38-203ENST00000356208 SAFB2Q14151 953 aaKnown RBP eCLIP29.44■■■□□ 2.3
RBM38-203ENST00000356208 BRD4O60885 1362 aaPredicted RBP29.44■■■□□ 2.3
RBM38-203ENST00000356208 PLPPR3Q6T4P5 718 aa29.44■■■□□ 2.3
RBM38-203ENST00000356208 TMEM2Q9UHN6 1383 aa29.42■■■□□ 2.3
RBM38-203ENST00000356208 AMER1Q5JTC6 1135 aaPredicted RBP29.41■■■□□ 2.3
RBM38-203ENST00000356208 NLRP13Q86W25 1043 aa29.4■■■□□ 2.3
RBM38-203ENST00000356208 EVC2Q86UK5 1308 aa29.39■■■□□ 2.3
RBM38-203ENST00000356208 PRAM1Q96QH2 718 aa29.39■■■□□ 2.3
RBM38-203ENST00000356208 PNISRQ8TF01 805 aaKnown RBP29.39■■■□□ 2.29
RBM38-203ENST00000356208 HDGFP51858 240 aaKnown RBP29.38■■■□□ 2.29
RBM38-203ENST00000356208 CARD14Q9BXL6 1004 aa29.35■■■□□ 2.29
RBM38-203ENST00000356208 POGKQ9P215 609 aa29.35■■■□□ 2.29
RBM38-203ENST00000356208 SLC12A5Q9H2X9 1139 aa29.34■■■□□ 2.29
RBM38-203ENST00000356208 LRPPRCP42704 1394 aaKnown RBP29.34■■■□□ 2.29
RBM38-203ENST00000356208 METP08581 1390 aa29.33■■■□□ 2.29
RBM38-203ENST00000356208 DLC1Q96QB1 1528 aa29.32■■■□□ 2.28
RBM38-203ENST00000356208 PUS7Q96PZ0 661 aaKnown RBP29.32■■■□□ 2.28
RBM38-203ENST00000356208 NPC1L1Q9UHC9 1359 aa29.32■■■□□ 2.28
RBM38-203ENST00000356208 MINK1Q8N4C8 1332 aaPredicted RBP29.32■■■□□ 2.28
RBM38-203ENST00000356208 RIMS1Q86UR5 1692 aaKnown RBP29.32■■■□□ 2.28
RBM38-203ENST00000356208 CABP2Q9NPB3 220 aa29.31■■■□□ 2.28
RBM38-203ENST00000356208 LTKP29376 864 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms