RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 GGNBP2Q9H3C7 697 aa17.84■□□□□ 0.45
SREBF1-202ENST00000355815 FOXD4L1Q9NU39 408 aa17.84■□□□□ 0.45
SREBF1-202ENST00000355815 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
SREBF1-202ENST00000355815 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
SREBF1-202ENST00000355815 RAPGEF3O95398 923 aa17.82■□□□□ 0.44
SREBF1-202ENST00000355815 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
SREBF1-202ENST00000355815 MYH16Q9H6N6 1097 aa17.82■□□□□ 0.44
SREBF1-202ENST00000355815 MTHFSP49914 203 aa17.81■□□□□ 0.44
SREBF1-202ENST00000355815 EIF3AQ14152 1382 aaKnown RBP17.81■□□□□ 0.44
SREBF1-202ENST00000355815 UBE2Q2Q8WVN8 375 aa17.81■□□□□ 0.44
SREBF1-202ENST00000355815 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
SREBF1-202ENST00000355815 PLEKHH2Q8IVE3 1493 aa17.8■□□□□ 0.44
SREBF1-202ENST00000355815 ATP10BO94823 1461 aa17.79■□□□□ 0.44
SREBF1-202ENST00000355815 SMG6Q86US8 1419 aaKnown RBP17.79■□□□□ 0.44
SREBF1-202ENST00000355815 CTTNBP2Q8WZ74 1663 aa17.78■□□□□ 0.44
SREBF1-202ENST00000355815 DISP3Q9P2K9 1392 aa17.77■□□□□ 0.44
SREBF1-202ENST00000355815 NFKBIBQ15653 356 aa17.77■□□□□ 0.44
SREBF1-202ENST00000355815 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
SREBF1-202ENST00000355815 HDGFL2Q7Z4V5 671 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-202ENST00000355815 TCP11L2Q8N4U5 519 aa17.76■□□□□ 0.43
SREBF1-202ENST00000355815 E9PSI1 815 aa17.76■□□□□ 0.43
SREBF1-202ENST00000355815 KDM6BO15054 1643 aa17.76■□□□□ 0.43
SREBF1-202ENST00000355815 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
SREBF1-202ENST00000355815 ERBINQ96RT1 1412 aa17.75■□□□□ 0.43
SREBF1-202ENST00000355815 CENPQQ7L2Z9 268 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-202ENST00000355815 ADGRF5Q8IZF2 1346 aa17.74■□□□□ 0.43
SREBF1-202ENST00000355815 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
SREBF1-202ENST00000355815 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
SREBF1-202ENST00000355815 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-202ENST00000355815 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SREBF1-202ENST00000355815 CGNL1Q0VF96 1302 aa17.72■□□□□ 0.43
SREBF1-202ENST00000355815 HMOX1P09601 288 aa17.72■□□□□ 0.43
SREBF1-202ENST00000355815 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
SREBF1-202ENST00000355815 DISP1Q96F81 1524 aa17.71■□□□□ 0.43
SREBF1-202ENST00000355815 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
SREBF1-202ENST00000355815 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.43
SREBF1-202ENST00000355815 TERF2IPQ9NYB0 399 aa17.71■□□□□ 0.43
SREBF1-202ENST00000355815 WDR62O43379 1518 aa17.7■□□□□ 0.42
SREBF1-202ENST00000355815 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
SREBF1-202ENST00000355815 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-202ENST00000355815 PZPP20742 1482 aa17.69■□□□□ 0.42
SREBF1-202ENST00000355815 EVC2Q86UK5 1308 aa17.69■□□□□ 0.42
SREBF1-202ENST00000355815 FAM13BQ9NYF5 915 aa17.69■□□□□ 0.42
SREBF1-202ENST00000355815 DHX29Q7Z478 1369 aaKnown RBP17.69■□□□□ 0.42
SREBF1-202ENST00000355815 FRAT2O75474 233 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-202ENST00000355815 TESK2Q96S53 571 aa17.67■□□□□ 0.42
SREBF1-202ENST00000355815 BACH2Q9BYV9 841 aa17.67■□□□□ 0.42
SREBF1-202ENST00000355815 RIPK4P57078 832 aa17.67■□□□□ 0.42
SREBF1-202ENST00000355815 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
SREBF1-202ENST00000355815 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
SREBF1-202ENST00000355815 FBLN1P23142 703 aa17.65■□□□□ 0.42
SREBF1-202ENST00000355815 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-202ENST00000355815 FOXD4L5Q5VV16 416 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-202ENST00000355815 FOXD4L4Q8WXT5 416 aaPredicted RBP17.64■□□□□ 0.41
SREBF1-202ENST00000355815 ADAMTS12P58397 1594 aa17.64■□□□□ 0.41
SREBF1-202ENST00000355815 MS4A1P11836 297 aa17.64■□□□□ 0.41
SREBF1-202ENST00000355815 LTV1Q96GA3 475 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-202ENST00000355815 GBP4Q96PP9 640 aa17.63■□□□□ 0.41
SREBF1-202ENST00000355815 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
SREBF1-202ENST00000355815 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
SREBF1-202ENST00000355815 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
SREBF1-202ENST00000355815 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
SREBF1-202ENST00000355815 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
SREBF1-202ENST00000355815 KIAA0556O60303 1618 aa17.62■□□□□ 0.41
SREBF1-202ENST00000355815 SAMD9Q5K651 1589 aa17.61■□□□□ 0.41
SREBF1-202ENST00000355815 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
SREBF1-202ENST00000355815 SLC4A10Q6U841 1118 aa17.61■□□□□ 0.41
SREBF1-202ENST00000355815 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
SREBF1-202ENST00000355815 IPO8O15397 1037 aaKnown RBP17.6■□□□□ 0.41
SREBF1-202ENST00000355815 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
SREBF1-202ENST00000355815 CHAF1AQ13111 956 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-202ENST00000355815 DUSP27Q5VZP5 1158 aa17.6■□□□□ 0.41
SREBF1-202ENST00000355815 KIF14Q15058 1648 aa17.6■□□□□ 0.41
SREBF1-202ENST00000355815 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
SREBF1-202ENST00000355815 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
SREBF1-202ENST00000355815 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.41
SREBF1-202ENST00000355815 LNPKQ9C0E8 428 aa17.58■□□□□ 0.41
SREBF1-202ENST00000355815 CABP1Q9NZU7 370 aa17.58■□□□□ 0.41
SREBF1-202ENST00000355815 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
SREBF1-202ENST00000355815 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-202ENST00000355815 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-202ENST00000355815 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-202ENST00000355815 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
SREBF1-202ENST00000355815 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-202ENST00000355815 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
SREBF1-202ENST00000355815 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
SREBF1-202ENST00000355815 NOL8Q76FK4 1167 aaKnown RBP17.56■□□□□ 0.4
SREBF1-202ENST00000355815 DRC7Q8IY82 874 aa17.56■□□□□ 0.4
SREBF1-202ENST00000355815 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-202ENST00000355815 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
SREBF1-202ENST00000355815 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
SREBF1-202ENST00000355815 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
SREBF1-202ENST00000355815 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
SREBF1-202ENST00000355815 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
SREBF1-202ENST00000355815 CASC1Q6TDU7 716 aa17.54■□□□□ 0.4
SREBF1-202ENST00000355815 PRAG1Q86YV5 1406 aa17.54■□□□□ 0.4
SREBF1-202ENST00000355815 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
SREBF1-202ENST00000355815 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
SREBF1-202ENST00000355815 TXNDC2Q86VQ3 553 aa17.54■□□□□ 0.4
SREBF1-202ENST00000355815 NUTM2GQ5VZR2 741 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms