RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 ATP10AO60312 1499 aa14.79□□□□□ -0.04
SVIP-201ENST00000354193 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
SVIP-201ENST00000354193 MAST1Q9Y2H9 1570 aa14.78□□□□□ -0.04
SVIP-201ENST00000354193 SLC24A1O60721 1099 aa14.78□□□□□ -0.04
SVIP-201ENST00000354193 ABCA9Q8IUA7 1624 aa14.78□□□□□ -0.04
SVIP-201ENST00000354193 NEO1Q92859 1461 aa14.77□□□□□ -0.04
SVIP-201ENST00000354193 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.04
SVIP-201ENST00000354193 RALGAPBQ86X10 1494 aa14.77□□□□□ -0.05
SVIP-201ENST00000354193 EVC2Q86UK5 1308 aa14.77□□□□□ -0.05
SVIP-201ENST00000354193 STAC3Q96MF2 364 aa14.76□□□□□ -0.05
SVIP-201ENST00000354193 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
SVIP-201ENST00000354193 C14orf93Q9H972 538 aaKnown RBP14.74□□□□□ -0.05
SVIP-201ENST00000354193 RRP7AQ9Y3A4 280 aaKnown RBP14.74□□□□□ -0.05
SVIP-201ENST00000354193 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
SVIP-201ENST00000354193 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
SVIP-201ENST00000354193 HDGFL2Q7Z4V5 671 aaPredicted RBP14.72□□□□□ -0.05
SVIP-201ENST00000354193 U2AF1L5P0DN76 240 aaPredicted RBP14.72□□□□□ -0.05
SVIP-201ENST00000354193 U2AF1Q01081 240 aaKnown RBP eCLIP14.72□□□□□ -0.05
SVIP-201ENST00000354193 CABP1Q9NZU7 370 aa14.71□□□□□ -0.05
SVIP-201ENST00000354193 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
SVIP-201ENST00000354193 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.05
SVIP-201ENST00000354193 CANXP27824 592 aaKnown RBP14.71□□□□□ -0.05
SVIP-201ENST00000354193 CFAP53Q96M91 514 aa14.71□□□□□ -0.05
SVIP-201ENST00000354193 PLXNC1O60486 1568 aa14.71□□□□□ -0.06
SVIP-201ENST00000354193 NEFMP07197 916 aa14.71□□□□□ -0.06
SVIP-201ENST00000354193 ZMYM3Q14202 1370 aa14.7□□□□□ -0.06
SVIP-201ENST00000354193 ADAMTS8Q9UP79 889 aa14.7□□□□□ -0.06
SVIP-201ENST00000354193 RPGRIP1LQ68CZ1 1315 aa14.7□□□□□ -0.06
SVIP-201ENST00000354193 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
SVIP-201ENST00000354193 CDK19Q9BWU1 502 aa14.7□□□□□ -0.06
SVIP-201ENST00000354193 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
SVIP-201ENST00000354193 TERF2IPQ9NYB0 399 aa14.7□□□□□ -0.06
SVIP-201ENST00000354193 FBLN1P23142 703 aa14.69□□□□□ -0.06
SVIP-201ENST00000354193 PPP2R1AP30153 589 aa14.69□□□□□ -0.06
SVIP-201ENST00000354193 B4GALNT3Q6L9W6 998 aa14.69□□□□□ -0.06
SVIP-201ENST00000354193 ARAP3Q8WWN8 1544 aa14.68□□□□□ -0.06
SVIP-201ENST00000354193 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
SVIP-201ENST00000354193 SCAF11Q99590 1463 aaKnown RBP14.68□□□□□ -0.06
SVIP-201ENST00000354193 HECW2Q9P2P5 1572 aa14.68□□□□□ -0.06
SVIP-201ENST00000354193 CDCA7LQ96GN5 454 aa14.67□□□□□ -0.06
SVIP-201ENST00000354193 APAF1O14727 1248 aa14.67□□□□□ -0.06
SVIP-201ENST00000354193 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
SVIP-201ENST00000354193 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
SVIP-201ENST00000354193 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
SVIP-201ENST00000354193 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
SVIP-201ENST00000354193 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
SVIP-201ENST00000354193 KDM5DQ9BY66 1539 aa14.66□□□□□ -0.06
SVIP-201ENST00000354193 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
SVIP-201ENST00000354193 MTHFSP49914 203 aa14.66□□□□□ -0.06
SVIP-201ENST00000354193 CGNL1Q0VF96 1302 aa14.65□□□□□ -0.06
SVIP-201ENST00000354193 KIDINS220Q9ULH0 1771 aa14.65□□□□□ -0.06
SVIP-201ENST00000354193 PER1O15534 1290 aaPredicted RBP14.64□□□□□ -0.07
SVIP-201ENST00000354193 IQGAP3Q86VI3 1631 aa14.64□□□□□ -0.07
SVIP-201ENST00000354193 CCDC136Q96JN2 1154 aa14.64□□□□□ -0.07
SVIP-201ENST00000354193 CARD14Q9BXL6 1004 aa14.63□□□□□ -0.07
SVIP-201ENST00000354193 TNRQ92752 1358 aa14.63□□□□□ -0.07
SVIP-201ENST00000354193 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
SVIP-201ENST00000354193 UNC13BO14795 1591 aa14.63□□□□□ -0.07
SVIP-201ENST00000354193 PTPRTO14522 1441 aa14.63□□□□□ -0.07
SVIP-201ENST00000354193 PLIN1O60240 522 aa14.62□□□□□ -0.07
SVIP-201ENST00000354193 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
SVIP-201ENST00000354193 E9PCH4 1651 aa14.61□□□□□ -0.07
SVIP-201ENST00000354193 NUDCQ9Y266 331 aa14.61□□□□□ -0.07
SVIP-201ENST00000354193 NSD3Q9BZ95 1437 aa14.61□□□□□ -0.07
SVIP-201ENST00000354193 INO80Q9ULG1 1556 aaPredicted RBP14.61□□□□□ -0.07
SVIP-201ENST00000354193 CLTCL1P53675 1640 aa14.6□□□□□ -0.07
SVIP-201ENST00000354193 MAPK8IP3Q9UPT6 1336 aa14.6□□□□□ -0.07
SVIP-201ENST00000354193 ABCC3O15438 1527 aa14.6□□□□□ -0.07
SVIP-201ENST00000354193 LTV1Q96GA3 475 aaPredicted RBP14.6□□□□□ -0.07
SVIP-201ENST00000354193 TRPM2O94759 1503 aa14.59□□□□□ -0.07
SVIP-201ENST00000354193 CFAP74Q9C0B2 1584 aa14.59□□□□□ -0.07
SVIP-201ENST00000354193 AMER1Q5JTC6 1135 aaPredicted RBP14.59□□□□□ -0.07
SVIP-201ENST00000354193 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
SVIP-201ENST00000354193 LTKP29376 864 aa14.59□□□□□ -0.07
SVIP-201ENST00000354193 CEP152O94986 1710 aa14.58□□□□□ -0.07
SVIP-201ENST00000354193 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.07
SVIP-201ENST00000354193 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.07
SVIP-201ENST00000354193 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.07
SVIP-201ENST00000354193 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.07
SVIP-201ENST00000354193 ABCA6Q8N139 1617 aa14.58□□□□□ -0.08
SVIP-201ENST00000354193 BRD4O60885 1362 aaPredicted RBP14.58□□□□□ -0.08
SVIP-201ENST00000354193 EFCAB6Q5THR3 1501 aa14.58□□□□□ -0.08
SVIP-201ENST00000354193 HMOX1P09601 288 aa14.57□□□□□ -0.08
SVIP-201ENST00000354193 BCORL1Q5H9F3 1711 aa14.57□□□□□ -0.08
SVIP-201ENST00000354193 RCAN3Q9UKA8 241 aa14.57□□□□□ -0.08
SVIP-201ENST00000354193 NUDT16Q96DE0 195 aaKnown RBP14.56□□□□□ -0.08
SVIP-201ENST00000354193 KDM5CP41229 1560 aa14.56□□□□□ -0.08
SVIP-201ENST00000354193 DIP2BQ9P265 1576 aa14.56□□□□□ -0.08
SVIP-201ENST00000354193 TET3O43151 1660 aa14.56□□□□□ -0.08
SVIP-201ENST00000354193 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
SVIP-201ENST00000354193 BCL2L13Q9BXK5 485 aa14.56□□□□□ -0.08
SVIP-201ENST00000354193 DIP2CQ9Y2E4 1556 aa14.55□□□□□ -0.08
SVIP-201ENST00000354193 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
SVIP-201ENST00000354193 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
SVIP-201ENST00000354193 COG3Q96JB2 828 aa14.54□□□□□ -0.08
SVIP-201ENST00000354193 NME9Q86XW9 330 aa14.54□□□□□ -0.08
SVIP-201ENST00000354193 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
SVIP-201ENST00000354193 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
SVIP-201ENST00000354193 MAGI2Q86UL8 1455 aa14.54□□□□□ -0.08
SVIP-201ENST00000354193 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms