RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 STRCP1A6NGW2 1772 aa32.92■■■□□ 2.86
SNX3-202ENST00000349379 HRCP23327 699 aa32.9■■■□□ 2.86
SNX3-202ENST00000349379 CHGAP10645 457 aaKnown RBP32.89■■■□□ 2.86
SNX3-202ENST00000349379 IQSEC2Q5JU85 1478 aa32.88■■■□□ 2.85
SNX3-202ENST00000349379 CPS1P31327 1500 aa32.87■■■□□ 2.85
SNX3-202ENST00000349379 FOXD1Q16676 465 aa32.85■■■□□ 2.85
SNX3-202ENST00000349379 PLEKHG1Q9ULL1 1385 aa32.84■■■□□ 2.85
SNX3-202ENST00000349379 HDGFP51858 240 aaKnown RBP32.83■■■□□ 2.85
SNX3-202ENST00000349379 NEXMIFQ5QGS0 1516 aa32.82■■■□□ 2.84
SNX3-202ENST00000349379 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.81■■■□□ 2.84
SNX3-202ENST00000349379 FBXO41Q8TF61 875 aa32.79■■■□□ 2.84
SNX3-202ENST00000349379 CCDC144AA2RUR9 1427 aa32.76■■■□□ 2.83
SNX3-202ENST00000349379 PPLO60437 1756 aa32.75■■■□□ 2.83
SNX3-202ENST00000349379 NRXN3Q9Y4C0 1643 aa32.75■■■□□ 2.83
SNX3-202ENST00000349379 DIP2AQ14689 1571 aa32.75■■■□□ 2.83
SNX3-202ENST00000349379 CHD2O14647 1828 aaKnown RBP32.74■■■□□ 2.83
SNX3-202ENST00000349379 PPP1R15AO75807 674 aaPredicted RBP32.74■■■□□ 2.83
SNX3-202ENST00000349379 NWD1Q149M9 1564 aa32.74■■■□□ 2.83
SNX3-202ENST00000349379 ADAMTS13Q76LX8 1427 aa32.73■■■□□ 2.83
SNX3-202ENST00000349379 SETBP1Q9Y6X0 1596 aa32.72■■■□□ 2.83
SNX3-202ENST00000349379 NUTM2DQ5VT03 806 aaPredicted RBP32.71■■■□□ 2.83
SNX3-202ENST00000349379 SLC26A8Q96RN1 970 aa32.71■■■□□ 2.83
SNX3-202ENST00000349379 XIRP1Q702N8 1843 aaKnown RBP32.7■■■□□ 2.83
SNX3-202ENST00000349379 SPATA31E1Q6ZUB1 1445 aa32.7■■■□□ 2.83
SNX3-202ENST00000349379 IFT172Q9UG01 1749 aa32.7■■■□□ 2.83
SNX3-202ENST00000349379 ZNF326Q5BKZ1 582 aaKnown RBP32.69■■■□□ 2.82
SNX3-202ENST00000349379 LRRC7Q96NW7 1537 aa32.68■■■□□ 2.82
SNX3-202ENST00000349379 TBX22Q9Y458 520 aa32.66■■■□□ 2.82
SNX3-202ENST00000349379 RPGRIP1LQ68CZ1 1315 aa32.64■■■□□ 2.82
SNX3-202ENST00000349379 ANKRD30BQ9BXX2 1392 aa32.64■■■□□ 2.82
SNX3-202ENST00000349379 BCANQ96GW7 911 aa32.63■■■□□ 2.81
SNX3-202ENST00000349379 KCNA6P17658 529 aa32.62■■■□□ 2.81
SNX3-202ENST00000349379 NKTRP30414 1462 aaKnown RBP32.61■■■□□ 2.81
SNX3-202ENST00000349379 SETD1AO15047 1707 aaKnown RBP32.61■■■□□ 2.81
SNX3-202ENST00000349379 SENP3Q9H4L4 574 aaPredicted RBP32.6■■■□□ 2.81
SNX3-202ENST00000349379 PIK3R4Q99570 1358 aa32.59■■■□□ 2.81
SNX3-202ENST00000349379 TRIM26Q12899 539 aaPredicted RBP32.55■■■□□ 2.8
SNX3-202ENST00000349379 VGFO15240 615 aaPredicted RBP32.54■■■□□ 2.8
SNX3-202ENST00000349379 XRN1Q8IZH2 1706 aaKnown RBP32.54■■■□□ 2.8
SNX3-202ENST00000349379 ALKQ9UM73 1620 aa32.53■■■□□ 2.8
SNX3-202ENST00000349379 PTPRUQ92729 1446 aa32.5■■■□□ 2.79
SNX3-202ENST00000349379 RGL3Q3MIN7 710 aa32.49■■■□□ 2.79
SNX3-202ENST00000349379 TMEM94Q12767 1356 aa32.46■■■□□ 2.79
SNX3-202ENST00000349379 METP08581 1390 aa32.45■■■□□ 2.79
SNX3-202ENST00000349379 UBAP1LF5GYI3 381 aa32.45■■■□□ 2.79
SNX3-202ENST00000349379 MYOM2P54296 1465 aa32.43■■■□□ 2.78
SNX3-202ENST00000349379 ADGRF5Q8IZF2 1346 aa32.43■■■□□ 2.78
SNX3-202ENST00000349379 PROSER2Q86WR7 435 aaPredicted RBP32.42■■■□□ 2.78
SNX3-202ENST00000349379 NRXN1Q9ULB1 1477 aa32.42■■■□□ 2.78
SNX3-202ENST00000349379 PIK3C2GO75747 1445 aa32.41■■■□□ 2.78
SNX3-202ENST00000349379 AMOTL2Q9Y2J4 779 aa32.39■■■□□ 2.78
SNX3-202ENST00000349379 NCOA3Q9Y6Q9 1424 aa32.39■■■□□ 2.78
SNX3-202ENST00000349379 TOM1O60784 492 aa32.38■■■□□ 2.77
SNX3-202ENST00000349379 PRAG1Q86YV5 1406 aa32.37■■■□□ 2.77
SNX3-202ENST00000349379 LAMC1P11047 1609 aa32.34■■■□□ 2.77
SNX3-202ENST00000349379 RBM33Q96EV2 1170 aaKnown RBP32.34■■■□□ 2.77
SNX3-202ENST00000349379 ASXL1Q8IXJ9 1541 aa32.33■■■□□ 2.77
SNX3-202ENST00000349379 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.31■■■□□ 2.76
SNX3-202ENST00000349379 DHX57Q6P158 1386 aaKnown RBP32.31■■■□□ 2.76
SNX3-202ENST00000349379 KNDC1Q76NI1 1749 aa32.29■■■□□ 2.76
SNX3-202ENST00000349379 PTCH1Q13635 1447 aa32.29■■■□□ 2.76
SNX3-202ENST00000349379 MSH6P52701 1360 aa32.28■■■□□ 2.76
SNX3-202ENST00000349379 NALCNQ8IZF0 1738 aa32.25■■■□□ 2.75
SNX3-202ENST00000349379 PIP4K2BP78356 416 aa32.23■■■□□ 2.75
SNX3-202ENST00000349379 STAC3Q96MF2 364 aa32.23■■■□□ 2.75
SNX3-202ENST00000349379 C14orf93Q9H972 538 aaKnown RBP32.23■■■□□ 2.75
SNX3-202ENST00000349379 TECPR2O15040 1411 aa32.22■■■□□ 2.75
SNX3-202ENST00000349379 ROBO2Q9HCK4 1378 aa32.2■■■□□ 2.75
SNX3-202ENST00000349379 LRPPRCP42704 1394 aaKnown RBP32.19■■■□□ 2.74
SNX3-202ENST00000349379 DCCP43146 1447 aa32.18■■■□□ 2.74
SNX3-202ENST00000349379 DCAF11Q8TEB1 546 aa32.18■■■□□ 2.74
SNX3-202ENST00000349379 C19orf44Q9H6X5 657 aa32.18■■■□□ 2.74
SNX3-202ENST00000349379 ROBO1Q9Y6N7 1651 aa32.18■■■□□ 2.74
SNX3-202ENST00000349379 ADGRL3Q9HAR2 1447 aa32.17■■■□□ 2.74
SNX3-202ENST00000349379 SCAF1Q9H7N4 1312 aaKnown RBP32.17■■■□□ 2.74
SNX3-202ENST00000349379 FAM135BQ49AJ0 1406 aa32.17■■■□□ 2.74
SNX3-202ENST00000349379 CFAP70Q5T0N1 1121 aa32.16■■■□□ 2.74
SNX3-202ENST00000349379 ABCC11Q96J66 1382 aa32.16■■■□□ 2.74
SNX3-202ENST00000349379 ADGRB1O14514 1584 aa32.15■■■□□ 2.74
SNX3-202ENST00000349379 YTHDC2Q9H6S0 1430 aaKnown RBP32.15■■■□□ 2.74
SNX3-202ENST00000349379 TMEM132EQ6IEE7 984 aa32.14■■■□□ 2.74
SNX3-202ENST00000349379 C14orf37Q86TY3 774 aa32.14■■■□□ 2.74
SNX3-202ENST00000349379 KIAA1210Q9ULL0 1709 aa32.13■■■□□ 2.73
SNX3-202ENST00000349379 KDM2AQ9Y2K7 1162 aa32.13■■■□□ 2.73
SNX3-202ENST00000349379 CADPS2Q86UW7 1296 aa32.1■■■□□ 2.73
SNX3-202ENST00000349379 SIN3AQ96ST3 1273 aa32.1■■■□□ 2.73
SNX3-202ENST00000349379 HSPA1LP34931 641 aa32.09■■■□□ 2.73
SNX3-202ENST00000349379 SLAIN2Q9P270 581 aa32.08■■■□□ 2.73
SNX3-202ENST00000349379 DLC1Q96QB1 1528 aa32.06■■■□□ 2.72
SNX3-202ENST00000349379 ATF3P18847 181 aa32.06■■■□□ 2.72
SNX3-202ENST00000349379 STK26Q9P289 416 aa32.05■■■□□ 2.72
SNX3-202ENST00000349379 MST1RQ04912 1400 aa32.04■■■□□ 2.72
SNX3-202ENST00000349379 CDC42BPGQ6DT37 1551 aa32.03■■■□□ 2.72
SNX3-202ENST00000349379 SIRT1Q96EB6 747 aa32.03■■■□□ 2.72
SNX3-202ENST00000349379 PLEKHH1Q9ULM0 1364 aa32■■■□□ 2.71
SNX3-202ENST00000349379 L3MBTL2Q969R5 705 aa32■■■□□ 2.71
SNX3-202ENST00000349379 ARHGEF28Q8N1W1 1705 aaKnown RBP31.98■■■□□ 2.71
SNX3-202ENST00000349379 WAPLQ7Z5K2 1190 aa31.98■■■□□ 2.71
SNX3-202ENST00000349379 PCGF6Q9BYE7 350 aa31.98■■■□□ 2.71
SNX3-202ENST00000349379 NEUROD1Q13562 356 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms