RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 TRPM2O94759 1503 aa20.52■□□□□ 0.88
TPM4-202ENST00000344824 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
TPM4-202ENST00000344824 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
TPM4-202ENST00000344824 RIMS2Q9UQ26 1411 aa20.49■□□□□ 0.87
TPM4-202ENST00000344824 BCANQ96GW7 911 aa20.49■□□□□ 0.87
TPM4-202ENST00000344824 CPS1P31327 1500 aa20.49■□□□□ 0.87
TPM4-202ENST00000344824 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
TPM4-202ENST00000344824 IQSEC2Q5JU85 1478 aa20.46■□□□□ 0.87
TPM4-202ENST00000344824 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
TPM4-202ENST00000344824 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
TPM4-202ENST00000344824 ZNF326Q5BKZ1 582 aaKnown RBP20.44■□□□□ 0.86
TPM4-202ENST00000344824 RAB3GAP2Q9H2M9 1393 aa20.43■□□□□ 0.86
TPM4-202ENST00000344824 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
TPM4-202ENST00000344824 PLEKHG1Q9ULL1 1385 aa20.4■□□□□ 0.86
TPM4-202ENST00000344824 HDGFP51858 240 aaKnown RBP20.4■□□□□ 0.86
TPM4-202ENST00000344824 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
TPM4-202ENST00000344824 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
TPM4-202ENST00000344824 UBAP1LF5GYI3 381 aa20.37■□□□□ 0.85
TPM4-202ENST00000344824 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
TPM4-202ENST00000344824 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
TPM4-202ENST00000344824 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
TPM4-202ENST00000344824 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
TPM4-202ENST00000344824 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
TPM4-202ENST00000344824 PPLO60437 1756 aa20.35■□□□□ 0.85
TPM4-202ENST00000344824 NWD1Q149M9 1564 aa20.35■□□□□ 0.85
TPM4-202ENST00000344824 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
TPM4-202ENST00000344824 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
TPM4-202ENST00000344824 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.85
TPM4-202ENST00000344824 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
TPM4-202ENST00000344824 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
TPM4-202ENST00000344824 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
TPM4-202ENST00000344824 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
TPM4-202ENST00000344824 KCNA6P17658 529 aa20.28■□□□□ 0.84
TPM4-202ENST00000344824 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
TPM4-202ENST00000344824 IFT172Q9UG01 1749 aa20.28■□□□□ 0.84
TPM4-202ENST00000344824 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
TPM4-202ENST00000344824 RBM33Q96EV2 1170 aaKnown RBP20.26■□□□□ 0.83
TPM4-202ENST00000344824 TMEM94Q12767 1356 aa20.25■□□□□ 0.83
TPM4-202ENST00000344824 TOM1O60784 492 aa20.25■□□□□ 0.83
TPM4-202ENST00000344824 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
TPM4-202ENST00000344824 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
TPM4-202ENST00000344824 ALKQ9UM73 1620 aa20.23■□□□□ 0.83
TPM4-202ENST00000344824 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
TPM4-202ENST00000344824 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
TPM4-202ENST00000344824 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
TPM4-202ENST00000344824 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
TPM4-202ENST00000344824 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
TPM4-202ENST00000344824 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
TPM4-202ENST00000344824 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
TPM4-202ENST00000344824 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
TPM4-202ENST00000344824 METP08581 1390 aa20.17■□□□□ 0.82
TPM4-202ENST00000344824 MSH6P52701 1360 aa20.17■□□□□ 0.82
TPM4-202ENST00000344824 AMOTL2Q9Y2J4 779 aa20.17■□□□□ 0.82
TPM4-202ENST00000344824 HRCP23327 699 aa20.15■□□□□ 0.82
TPM4-202ENST00000344824 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.82
TPM4-202ENST00000344824 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
TPM4-202ENST00000344824 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
TPM4-202ENST00000344824 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
TPM4-202ENST00000344824 ANKRD30BQ9BXX2 1392 aa20.13■□□□□ 0.81
TPM4-202ENST00000344824 NALCNQ8IZF0 1738 aa20.11■□□□□ 0.81
TPM4-202ENST00000344824 HSPA1LP34931 641 aa20.1■□□□□ 0.81
TPM4-202ENST00000344824 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
TPM4-202ENST00000344824 ADRA2BP18089 450 aa20.09■□□□□ 0.81
TPM4-202ENST00000344824 LAMC1P11047 1609 aa20.08■□□□□ 0.8
TPM4-202ENST00000344824 MYOM2P54296 1465 aa20.07■□□□□ 0.8
TPM4-202ENST00000344824 PIK3C2GO75747 1445 aa20.07■□□□□ 0.8
TPM4-202ENST00000344824 PIAS4Q8N2W9 510 aaPredicted RBP20.07■□□□□ 0.8
TPM4-202ENST00000344824 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
TPM4-202ENST00000344824 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
TPM4-202ENST00000344824 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
TPM4-202ENST00000344824 PHLPP1O60346 1717 aa20.04■□□□□ 0.8
TPM4-202ENST00000344824 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
TPM4-202ENST00000344824 ATF3P18847 181 aa20.03■□□□□ 0.8
TPM4-202ENST00000344824 STK26Q9P289 416 aa20.02■□□□□ 0.79
TPM4-202ENST00000344824 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.79
TPM4-202ENST00000344824 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
TPM4-202ENST00000344824 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
TPM4-202ENST00000344824 C19orf44Q9H6X5 657 aa20.01■□□□□ 0.79
TPM4-202ENST00000344824 NRXN1Q9ULB1 1477 aa20■□□□□ 0.79
TPM4-202ENST00000344824 FAM135BQ49AJ0 1406 aa20■□□□□ 0.79
TPM4-202ENST00000344824 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
TPM4-202ENST00000344824 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
TPM4-202ENST00000344824 DCAF11Q8TEB1 546 aa19.99■□□□□ 0.79
TPM4-202ENST00000344824 SLAIN2Q9P270 581 aa19.99■□□□□ 0.79
TPM4-202ENST00000344824 DCCP43146 1447 aa19.98■□□□□ 0.79
TPM4-202ENST00000344824 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
TPM4-202ENST00000344824 CFAP70Q5T0N1 1121 aa19.96■□□□□ 0.79
TPM4-202ENST00000344824 PRAG1Q86YV5 1406 aa19.96■□□□□ 0.79
TPM4-202ENST00000344824 YTHDC2Q9H6S0 1430 aaKnown RBP19.96■□□□□ 0.79
TPM4-202ENST00000344824 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
TPM4-202ENST00000344824 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.78
TPM4-202ENST00000344824 MSH5O43196 834 aa19.94■□□□□ 0.78
TPM4-202ENST00000344824 MST1RQ04912 1400 aa19.94■□□□□ 0.78
TPM4-202ENST00000344824 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
TPM4-202ENST00000344824 TECPR2O15040 1411 aa19.92■□□□□ 0.78
TPM4-202ENST00000344824 COL16A1Q07092 1604 aaPredicted RBP19.92■□□□□ 0.78
TPM4-202ENST00000344824 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
TPM4-202ENST00000344824 NHSL1Q5SYE7 1610 aa19.9■□□□□ 0.78
TPM4-202ENST00000344824 AHDC1Q5TGY3 1603 aaPredicted RBP19.9■□□□□ 0.78
TPM4-202ENST00000344824 WAPLQ7Z5K2 1190 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms