RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FAM69CQ0P6D2 419 aa19.48■□□□□ 0.71
TDP2-201ENST00000341060 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
TDP2-201ENST00000341060 KANK1Q14678 1352 aa19.48■□□□□ 0.71
TDP2-201ENST00000341060 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
TDP2-201ENST00000341060 IFT172Q9UG01 1749 aa19.47■□□□□ 0.71
TDP2-201ENST00000341060 KIDINS220Q9ULH0 1771 aa19.45■□□□□ 0.7
TDP2-201ENST00000341060 KDM5AP29375 1690 aaKnown RBP19.45■□□□□ 0.7
TDP2-201ENST00000341060 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
TDP2-201ENST00000341060 MAP3K4Q9Y6R4 1608 aa19.44■□□□□ 0.7
TDP2-201ENST00000341060 EFCAB6Q5THR3 1501 aa19.43■□□□□ 0.7
TDP2-201ENST00000341060 RCAN3Q9UKA8 241 aa19.42■□□□□ 0.7
TDP2-201ENST00000341060 ABCA6Q8N139 1617 aa19.42■□□□□ 0.7
TDP2-201ENST00000341060 MYOM2P54296 1465 aa19.42■□□□□ 0.7
TDP2-201ENST00000341060 CDCA8Q53HL2 280 aa19.42■□□□□ 0.7
TDP2-201ENST00000341060 EIF3AQ14152 1382 aaKnown RBP19.41■□□□□ 0.7
TDP2-201ENST00000341060 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
TDP2-201ENST00000341060 MROH2AA6NES4 1674 aa19.4■□□□□ 0.7
TDP2-201ENST00000341060 PPRC1Q5VV67 1664 aaKnown RBP19.4■□□□□ 0.7
TDP2-201ENST00000341060 MYT1LQ9UL68 1186 aa19.4■□□□□ 0.7
TDP2-201ENST00000341060 KIF3BO15066 747 aa19.39■□□□□ 0.69
TDP2-201ENST00000341060 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
TDP2-201ENST00000341060 ASXL1Q8IXJ9 1541 aa19.39■□□□□ 0.69
TDP2-201ENST00000341060 UGGT1Q9NYU2 1555 aa19.38■□□□□ 0.69
TDP2-201ENST00000341060 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
TDP2-201ENST00000341060 GLI2P10070 1586 aa19.38■□□□□ 0.69
TDP2-201ENST00000341060 LMTK2Q8IWU2 1503 aa19.37■□□□□ 0.69
TDP2-201ENST00000341060 MYO3AQ8NEV4 1616 aa19.36■□□□□ 0.69
TDP2-201ENST00000341060 AMER1Q5JTC6 1135 aaPredicted RBP19.36■□□□□ 0.69
TDP2-201ENST00000341060 ZNF518AQ6AHZ1 1483 aa19.36■□□□□ 0.69
TDP2-201ENST00000341060 CDCA7LQ96GN5 454 aa19.36■□□□□ 0.69
TDP2-201ENST00000341060 CFAP74Q9C0B2 1584 aa19.35■□□□□ 0.69
TDP2-201ENST00000341060 NPC1L1Q9UHC9 1359 aa19.35■□□□□ 0.69
TDP2-201ENST00000341060 TSPOAP1O95153 1857 aa19.34■□□□□ 0.69
TDP2-201ENST00000341060 RAPGEF3O95398 923 aa19.34■□□□□ 0.69
TDP2-201ENST00000341060 PPP2R1AP30153 589 aa19.34■□□□□ 0.69
TDP2-201ENST00000341060 PIK3C2GO75747 1445 aa19.34■□□□□ 0.69
TDP2-201ENST00000341060 NRXN1Q9ULB1 1477 aa19.33■□□□□ 0.68
TDP2-201ENST00000341060 EXOC6Q8TAG9 804 aa19.33■□□□□ 0.68
TDP2-201ENST00000341060 NEO1Q92859 1461 aa19.32■□□□□ 0.68
TDP2-201ENST00000341060 ERICH6Q7L0X2 663 aa19.32■□□□□ 0.68
TDP2-201ENST00000341060 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
TDP2-201ENST00000341060 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
TDP2-201ENST00000341060 ERVK-7P63135 1459 aa19.31■□□□□ 0.68
TDP2-201ENST00000341060 PPLO60437 1756 aa19.31■□□□□ 0.68
TDP2-201ENST00000341060 SLC24A1O60721 1099 aa19.31■□□□□ 0.68
TDP2-201ENST00000341060 DNAJC5Q9H3Z4 198 aa19.31■□□□□ 0.68
TDP2-201ENST00000341060 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
TDP2-201ENST00000341060 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
TDP2-201ENST00000341060 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
TDP2-201ENST00000341060 ZC3H13Q5T200 1668 aaKnown RBP19.28■□□□□ 0.68
TDP2-201ENST00000341060 KIF13AQ9H1H9 1805 aa19.27■□□□□ 0.68
TDP2-201ENST00000341060 HECW2Q9P2P5 1572 aa19.27■□□□□ 0.68
TDP2-201ENST00000341060 ADGRF5Q8IZF2 1346 aa19.27■□□□□ 0.68
TDP2-201ENST00000341060 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
TDP2-201ENST00000341060 FRMPD1Q5SYB0 1578 aa19.27■□□□□ 0.68
TDP2-201ENST00000341060 SBNO2Q9Y2G9 1366 aa19.27■□□□□ 0.67
TDP2-201ENST00000341060 CFAP70Q5T0N1 1121 aa19.27■□□□□ 0.67
TDP2-201ENST00000341060 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
TDP2-201ENST00000341060 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
TDP2-201ENST00000341060 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
TDP2-201ENST00000341060 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
TDP2-201ENST00000341060 NPATQ14207 1427 aa19.22■□□□□ 0.67
TDP2-201ENST00000341060 NOS1P29475 1434 aa19.21■□□□□ 0.67
TDP2-201ENST00000341060 TCERG1O14776 1098 aaKnown RBP19.2■□□□□ 0.66
TDP2-201ENST00000341060 PLIN1O60240 522 aa19.2■□□□□ 0.66
TDP2-201ENST00000341060 DUSP27Q5VZP5 1158 aa19.19■□□□□ 0.66
TDP2-201ENST00000341060 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
TDP2-201ENST00000341060 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
TDP2-201ENST00000341060 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
TDP2-201ENST00000341060 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
TDP2-201ENST00000341060 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
TDP2-201ENST00000341060 RICTORQ6R327 1708 aa19.18■□□□□ 0.66
TDP2-201ENST00000341060 ABCC3O15438 1527 aa19.17■□□□□ 0.66
TDP2-201ENST00000341060 SIGLEC1Q9BZZ2 1709 aa19.17■□□□□ 0.66
TDP2-201ENST00000341060 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
TDP2-201ENST00000341060 PIK3C2BO00750 1634 aa19.16■□□□□ 0.66
TDP2-201ENST00000341060 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
TDP2-201ENST00000341060 IPO9Q96P70 1041 aaKnown RBP19.15■□□□□ 0.66
TDP2-201ENST00000341060 CARD14Q9BXL6 1004 aa19.15■□□□□ 0.66
TDP2-201ENST00000341060 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
TDP2-201ENST00000341060 USP32Q8NFA0 1604 aa19.15■□□□□ 0.66
TDP2-201ENST00000341060 MS4A1P11836 297 aa19.14■□□□□ 0.65
TDP2-201ENST00000341060 YEATS2Q9ULM3 1422 aa19.13■□□□□ 0.65
TDP2-201ENST00000341060 SHPRHQ149N8 1683 aa19.13■□□□□ 0.65
TDP2-201ENST00000341060 ARHGEF28Q8N1W1 1705 aaKnown RBP19.12■□□□□ 0.65
TDP2-201ENST00000341060 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
TDP2-201ENST00000341060 RPGRIP1LQ68CZ1 1315 aa19.11■□□□□ 0.65
TDP2-201ENST00000341060 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
TDP2-201ENST00000341060 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
TDP2-201ENST00000341060 POLR3AO14802 1390 aaPredicted RBP19.11■□□□□ 0.65
TDP2-201ENST00000341060 PAK3O75914 559 aaPredicted RBP19.1■□□□□ 0.65
TDP2-201ENST00000341060 C20orf194Q5TEA3 1177 aa19.1■□□□□ 0.65
TDP2-201ENST00000341060 NKTRP30414 1462 aaKnown RBP19.1■□□□□ 0.65
TDP2-201ENST00000341060 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
TDP2-201ENST00000341060 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
TDP2-201ENST00000341060 GGT6Q6P531 493 aa19.1■□□□□ 0.65
TDP2-201ENST00000341060 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
TDP2-201ENST00000341060 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
TDP2-201ENST00000341060 PDE4AP27815 886 aa19.09■□□□□ 0.65
TDP2-201ENST00000341060 BACH2Q9BYV9 841 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms