RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 IQGAP1P46940 1657 aa28.34■■■□□ 2.13
UBE2E2-201ENST00000335798 LTKP29376 864 aa28.34■■■□□ 2.13
UBE2E2-201ENST00000335798 SIN3AQ96ST3 1273 aa28.34■■■□□ 2.13
UBE2E2-201ENST00000335798 CLSPNQ9HAW4 1339 aa28.33■■■□□ 2.13
UBE2E2-201ENST00000335798 ZNF326Q5BKZ1 582 aaKnown RBP28.3■■■□□ 2.12
UBE2E2-201ENST00000335798 ANKLE2Q86XL3 938 aa28.3■■■□□ 2.12
UBE2E2-201ENST00000335798 NRXN3Q9Y4C0 1643 aa28.3■■■□□ 2.12
UBE2E2-201ENST00000335798 RPGRIP1LQ68CZ1 1315 aa28.3■■■□□ 2.12
UBE2E2-201ENST00000335798 NCKAP5LQ9HCH0 1330 aa28.3■■■□□ 2.12
UBE2E2-201ENST00000335798 RGL3Q3MIN7 710 aa28.28■■■□□ 2.12
UBE2E2-201ENST00000335798 TXNDC2Q86VQ3 553 aa28.28■■■□□ 2.12
UBE2E2-201ENST00000335798 MYOM2P54296 1465 aa28.26■■■□□ 2.12
UBE2E2-201ENST00000335798 EID1Q9Y6B2 187 aa28.26■■■□□ 2.11
UBE2E2-201ENST00000335798 NPHP4O75161 1426 aaPredicted RBP28.26■■■□□ 2.11
UBE2E2-201ENST00000335798 SETBP1Q9Y6X0 1596 aa28.25■■■□□ 2.11
UBE2E2-201ENST00000335798 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.25■■■□□ 2.11
UBE2E2-201ENST00000335798 CCER1Q8TC90 406 aaPredicted RBP28.24■■■□□ 2.11
UBE2E2-201ENST00000335798 PLEKHG1Q9ULL1 1385 aa28.24■■■□□ 2.11
UBE2E2-201ENST00000335798 SETD1AO15047 1707 aaKnown RBP28.24■■■□□ 2.11
UBE2E2-201ENST00000335798 NRXN1Q9ULB1 1477 aa28.23■■■□□ 2.11
UBE2E2-201ENST00000335798 HDGFP51858 240 aaKnown RBP28.22■■■□□ 2.11
UBE2E2-201ENST00000335798 NEUROD1Q13562 356 aa28.21■■■□□ 2.11
UBE2E2-201ENST00000335798 NUTM2DQ5VT03 806 aaPredicted RBP28.21■■■□□ 2.11
UBE2E2-201ENST00000335798 DIP2AQ14689 1571 aa28.18■■■□□ 2.1
UBE2E2-201ENST00000335798 VGFO15240 615 aaPredicted RBP28.18■■■□□ 2.1
UBE2E2-201ENST00000335798 PPP1R15AO75807 674 aaPredicted RBP28.18■■■□□ 2.1
UBE2E2-201ENST00000335798 PIK3C2GO75747 1445 aa28.17■■■□□ 2.1
UBE2E2-201ENST00000335798 ADAMTS13Q76LX8 1427 aa28.17■■■□□ 2.1
UBE2E2-201ENST00000335798 ADGRF5Q8IZF2 1346 aa28.16■■■□□ 2.1
UBE2E2-201ENST00000335798 DCAF11Q8TEB1 546 aa28.14■■■□□ 2.09
UBE2E2-201ENST00000335798 L3MBTL2Q969R5 705 aa28.14■■■□□ 2.09
UBE2E2-201ENST00000335798 LAMC1P11047 1609 aa28.13■■■□□ 2.09
UBE2E2-201ENST00000335798 ALKQ9UM73 1620 aa28.13■■■□□ 2.09
UBE2E2-201ENST00000335798 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
UBE2E2-201ENST00000335798 STAC3Q96MF2 364 aa28.12■■■□□ 2.09
UBE2E2-201ENST00000335798 TONSLQ96HA7 1378 aa28.11■■■□□ 2.09
UBE2E2-201ENST00000335798 CHD2O14647 1828 aaKnown RBP28.1■■■□□ 2.09
UBE2E2-201ENST00000335798 STRCP1A6NGW2 1772 aa28.1■■■□□ 2.09
UBE2E2-201ENST00000335798 KIAA1210Q9ULL0 1709 aa28.09■■■□□ 2.09
UBE2E2-201ENST00000335798 PRAG1Q86YV5 1406 aa28.08■■■□□ 2.09
UBE2E2-201ENST00000335798 ASXL1Q8IXJ9 1541 aa28.06■■■□□ 2.08
UBE2E2-201ENST00000335798 SLC26A8Q96RN1 970 aa28.06■■■□□ 2.08
UBE2E2-201ENST00000335798 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
UBE2E2-201ENST00000335798 KDM2AQ9Y2K7 1162 aa28.06■■■□□ 2.08
UBE2E2-201ENST00000335798 NWD1Q149M9 1564 aa28.05■■■□□ 2.08
UBE2E2-201ENST00000335798 TBX22Q9Y458 520 aa28.04■■■□□ 2.08
UBE2E2-201ENST00000335798 TRPM1Q7Z4N2 1603 aa28.03■■■□□ 2.08
UBE2E2-201ENST00000335798 XRN1Q8IZH2 1706 aaKnown RBP28.02■■■□□ 2.08
UBE2E2-201ENST00000335798 BCANQ96GW7 911 aa28.01■■■□□ 2.07
UBE2E2-201ENST00000335798 TIMELESSQ9UNS1 1208 aa28.01■■■□□ 2.07
UBE2E2-201ENST00000335798 METP08581 1390 aa28■■■□□ 2.07
UBE2E2-201ENST00000335798 PIK3R4Q99570 1358 aa28■■■□□ 2.07
UBE2E2-201ENST00000335798 ADGRB1O14514 1584 aa28■■■□□ 2.07
UBE2E2-201ENST00000335798 C14orf93Q9H972 538 aaKnown RBP27.98■■■□□ 2.07
UBE2E2-201ENST00000335798 LTBP4Q8N2S1 1624 aa27.98■■■□□ 2.07
UBE2E2-201ENST00000335798 KNDC1Q76NI1 1749 aa27.97■■■□□ 2.07
UBE2E2-201ENST00000335798 PTPRUQ92729 1446 aa27.97■■■□□ 2.07
UBE2E2-201ENST00000335798 CFAP70Q5T0N1 1121 aa27.95■■■□□ 2.07
UBE2E2-201ENST00000335798 ZNF335Q9H4Z2 1342 aaPredicted RBP27.95■■■□□ 2.06
UBE2E2-201ENST00000335798 NBPF8Q3BBV2 869 aa27.92■■■□□ 2.06
UBE2E2-201ENST00000335798 XIRP1Q702N8 1843 aaKnown RBP27.92■■■□□ 2.06
UBE2E2-201ENST00000335798 NKTRP30414 1462 aaKnown RBP27.91■■■□□ 2.06
UBE2E2-201ENST00000335798 CPS1P31327 1500 aa27.9■■■□□ 2.06
UBE2E2-201ENST00000335798 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
UBE2E2-201ENST00000335798 KCNA6P17658 529 aa27.89■■■□□ 2.05
UBE2E2-201ENST00000335798 TECPR2O15040 1411 aa27.87■■■□□ 2.05
UBE2E2-201ENST00000335798 YTHDC2Q9H6S0 1430 aaKnown RBP27.87■■■□□ 2.05
UBE2E2-201ENST00000335798 ARHGEF28Q8N1W1 1705 aaKnown RBP27.86■■■□□ 2.05
UBE2E2-201ENST00000335798 TMEM132EQ6IEE7 984 aa27.86■■■□□ 2.05
UBE2E2-201ENST00000335798 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
UBE2E2-201ENST00000335798 NBPF1Q3BBV0 1214 aa27.84■■■□□ 2.05
UBE2E2-201ENST00000335798 AMOTL2Q9Y2J4 779 aa27.84■■■□□ 2.05
UBE2E2-201ENST00000335798 PTCH1Q13635 1447 aa27.84■■■□□ 2.05
UBE2E2-201ENST00000335798 LRRC7Q96NW7 1537 aa27.83■■■□□ 2.05
UBE2E2-201ENST00000335798 GPRASP1Q5JY77 1395 aa27.82■■■□□ 2.04
UBE2E2-201ENST00000335798 DLC1Q96QB1 1528 aa27.82■■■□□ 2.04
UBE2E2-201ENST00000335798 ABCC11Q96J66 1382 aa27.81■■■□□ 2.04
UBE2E2-201ENST00000335798 ROCK2O75116 1388 aaKnown RBP27.78■■■□□ 2.04
UBE2E2-201ENST00000335798 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
UBE2E2-201ENST00000335798 NALCNQ8IZF0 1738 aa27.76■■■□□ 2.03
UBE2E2-201ENST00000335798 FAM135BQ49AJ0 1406 aa27.74■■■□□ 2.03
UBE2E2-201ENST00000335798 STK26Q9P289 416 aa27.73■■■□□ 2.03
UBE2E2-201ENST00000335798 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.72■■■□□ 2.03
UBE2E2-201ENST00000335798 TMEM94Q12767 1356 aa27.71■■■□□ 2.03
UBE2E2-201ENST00000335798 IQSEC2Q5JU85 1478 aa27.71■■■□□ 2.03
UBE2E2-201ENST00000335798 NCOA3Q9Y6Q9 1424 aa27.71■■■□□ 2.03
UBE2E2-201ENST00000335798 SIRT1Q96EB6 747 aa27.7■■■□□ 2.03
UBE2E2-201ENST00000335798 PLEKHH1Q9ULM0 1364 aa27.69■■■□□ 2.02
UBE2E2-201ENST00000335798 PROSER2Q86WR7 435 aaPredicted RBP27.68■■■□□ 2.02
UBE2E2-201ENST00000335798 TRAK1Q9UPV9 953 aa27.68■■■□□ 2.02
UBE2E2-201ENST00000335798 QRICH2Q9H0J4 1663 aa27.67■■■□□ 2.02
UBE2E2-201ENST00000335798 RBM33Q96EV2 1170 aaKnown RBP27.67■■■□□ 2.02
UBE2E2-201ENST00000335798 ADGRL3Q9HAR2 1447 aa27.65■■■□□ 2.02
UBE2E2-201ENST00000335798 ADGRB2O60241 1585 aa27.64■■■□□ 2.01
UBE2E2-201ENST00000335798 WAPLQ7Z5K2 1190 aa27.64■■■□□ 2.01
UBE2E2-201ENST00000335798 CARD11Q9BXL7 1154 aa27.64■■■□□ 2.01
UBE2E2-201ENST00000335798 CERKQ8TCT0 537 aa27.62■■■□□ 2.01
UBE2E2-201ENST00000335798 PRAM1Q96QH2 718 aa27.62■■■□□ 2.01
UBE2E2-201ENST00000335798 CDC42BPGQ6DT37 1551 aa27.61■■■□□ 2.01
UBE2E2-201ENST00000335798 DCCP43146 1447 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms