RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OSCARQ8IYS5 282 aa18.39■□□□□ 0.54
SF1-202ENST00000334944 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.54
SF1-202ENST00000334944 CFAP65Q6ZU64 1925 aaKnown RBP18.38■□□□□ 0.53
SF1-202ENST00000334944 EIF2AK4Q9P2K8 1649 aaKnown RBP18.37■□□□□ 0.53
SF1-202ENST00000334944 RAPGEF3O95398 923 aa18.36■□□□□ 0.53
SF1-202ENST00000334944 TRPM2O94759 1503 aa18.36■□□□□ 0.53
SF1-202ENST00000334944 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
SF1-202ENST00000334944 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
SF1-202ENST00000334944 PLIN1O60240 522 aa18.35■□□□□ 0.53
SF1-202ENST00000334944 PTPRTO14522 1441 aa18.35■□□□□ 0.53
SF1-202ENST00000334944 ABCA9Q8IUA7 1624 aa18.35■□□□□ 0.53
SF1-202ENST00000334944 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
SF1-202ENST00000334944 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
SF1-202ENST00000334944 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.53
SF1-202ENST00000334944 INO80Q9ULG1 1556 aaPredicted RBP18.33■□□□□ 0.52
SF1-202ENST00000334944 RNF123Q5XPI4 1314 aa18.32■□□□□ 0.52
SF1-202ENST00000334944 PPP2R1AP30153 589 aa18.32■□□□□ 0.52
SF1-202ENST00000334944 PKNOX2Q96KN3 472 aa18.32■□□□□ 0.52
SF1-202ENST00000334944 ARAP3Q8WWN8 1544 aa18.32■□□□□ 0.52
SF1-202ENST00000334944 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
SF1-202ENST00000334944 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
SF1-202ENST00000334944 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
SF1-202ENST00000334944 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
SF1-202ENST00000334944 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
SF1-202ENST00000334944 CD109Q6YHK3 1445 aa18.3■□□□□ 0.52
SF1-202ENST00000334944 LAMC1P11047 1609 aa18.3■□□□□ 0.52
SF1-202ENST00000334944 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
SF1-202ENST00000334944 TET3O43151 1660 aa18.3■□□□□ 0.52
SF1-202ENST00000334944 CCDC146Q8IYE0 955 aa18.29■□□□□ 0.52
SF1-202ENST00000334944 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
SF1-202ENST00000334944 CEP152O94986 1710 aa18.28■□□□□ 0.52
SF1-202ENST00000334944 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
SF1-202ENST00000334944 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
SF1-202ENST00000334944 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
SF1-202ENST00000334944 WDR43Q15061 677 aaKnown RBP eCLIP18.27■□□□□ 0.52
SF1-202ENST00000334944 KIDINS220Q9ULH0 1771 aa18.27■□□□□ 0.52
SF1-202ENST00000334944 NOS1P29475 1434 aa18.25■□□□□ 0.51
SF1-202ENST00000334944 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
SF1-202ENST00000334944 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
SF1-202ENST00000334944 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
SF1-202ENST00000334944 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
SF1-202ENST00000334944 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
SF1-202ENST00000334944 VWDEQ8N2E2 1590 aa18.24■□□□□ 0.51
SF1-202ENST00000334944 SAFB2Q14151 953 aaKnown RBP eCLIP18.24■□□□□ 0.51
SF1-202ENST00000334944 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
SF1-202ENST00000334944 PPRC1Q5VV67 1664 aaKnown RBP18.23■□□□□ 0.51
SF1-202ENST00000334944 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
SF1-202ENST00000334944 NPATQ14207 1427 aa18.21■□□□□ 0.51
SF1-202ENST00000334944 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
SF1-202ENST00000334944 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
SF1-202ENST00000334944 FRAT1Q92837 279 aaPredicted RBP18.21■□□□□ 0.51
SF1-202ENST00000334944 GSE1Q14687 1217 aa18.2■□□□□ 0.5
SF1-202ENST00000334944 PLEKHH1Q9ULM0 1364 aa18.2■□□□□ 0.5
SF1-202ENST00000334944 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
SF1-202ENST00000334944 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
SF1-202ENST00000334944 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
SF1-202ENST00000334944 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
SF1-202ENST00000334944 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
SF1-202ENST00000334944 BLMP54132 1417 aaPredicted RBP18.19■□□□□ 0.5
SF1-202ENST00000334944 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
SF1-202ENST00000334944 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
SF1-202ENST00000334944 ERVK-7P63135 1459 aa18.18■□□□□ 0.5
SF1-202ENST00000334944 MAP3K4Q9Y6R4 1608 aa18.17■□□□□ 0.5
SF1-202ENST00000334944 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
SF1-202ENST00000334944 APAF1O14727 1248 aa18.17■□□□□ 0.5
SF1-202ENST00000334944 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
SF1-202ENST00000334944 ASXL1Q8IXJ9 1541 aa18.16■□□□□ 0.5
SF1-202ENST00000334944 KIF1BO60333 1816 aa18.16■□□□□ 0.5
SF1-202ENST00000334944 PDE4AP27815 886 aa18.16■□□□□ 0.5
SF1-202ENST00000334944 STK26Q9P289 416 aa18.16■□□□□ 0.5
SF1-202ENST00000334944 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
SF1-202ENST00000334944 FRMPD1Q5SYB0 1578 aa18.15■□□□□ 0.5
SF1-202ENST00000334944 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
SF1-202ENST00000334944 MYOM1P52179 1685 aa18.13■□□□□ 0.49
SF1-202ENST00000334944 SYNMO15061 1565 aa18.13■□□□□ 0.49
SF1-202ENST00000334944 NEUROD2Q15784 382 aa18.13■□□□□ 0.49
SF1-202ENST00000334944 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
SF1-202ENST00000334944 NFKBIBQ15653 356 aa18.12■□□□□ 0.49
SF1-202ENST00000334944 MYOM2P54296 1465 aa18.12■□□□□ 0.49
SF1-202ENST00000334944 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
SF1-202ENST00000334944 C14orf93Q9H972 538 aaKnown RBP18.11■□□□□ 0.49
SF1-202ENST00000334944 IDI1Q13907 227 aa18.11■□□□□ 0.49
SF1-202ENST00000334944 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
SF1-202ENST00000334944 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
SF1-202ENST00000334944 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
SF1-202ENST00000334944 GOLGA2Q08379 1002 aa18.1■□□□□ 0.49
SF1-202ENST00000334944 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
SF1-202ENST00000334944 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
SF1-202ENST00000334944 YEATS2Q9ULM3 1422 aa18.09■□□□□ 0.49
SF1-202ENST00000334944 MLH3Q9UHC1 1453 aa18.09■□□□□ 0.49
SF1-202ENST00000334944 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
SF1-202ENST00000334944 MORC1Q86VD1 984 aa18.08■□□□□ 0.49
SF1-202ENST00000334944 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.49
SF1-202ENST00000334944 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
SF1-202ENST00000334944 NSD3Q9BZ95 1437 aa18.07■□□□□ 0.48
SF1-202ENST00000334944 ADGRB3O60242 1522 aa18.07■□□□□ 0.48
SF1-202ENST00000334944 ABCC3O15438 1527 aa18.06■□□□□ 0.48
SF1-202ENST00000334944 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
SF1-202ENST00000334944 LMTK2Q8IWU2 1503 aa18.05■□□□□ 0.48
SF1-202ENST00000334944 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms